Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09063 Corylus avellana HOM05D007590 ORTHO05D007875 4.7e-30 134.0 75 100.0
Cfa012011 Carpinus fangiana HOM05D007590 ORTHO05D007875 1.0e-21 106.3 80 82.5
CiPaw.12G082900 Carya illinoinensis HOM05D007590 ORTHO05D007875 3.8e-16 87.8 74 62.2
QL02p030422 Quercus lobata HOM05D007590 ORTHO05D007875 5.5e-15 84.0 73 65.8
CiPaw.11G121300 Carya illinoinensis HOM05D007590 ORTHO05D007875 9.7e-12 73.2 73 65.8
TAR629G1835 Trochodendron aralioides HOM05D007590 ORTHO05D007875 2.2e-11 72.0 74 51.4
Prupe.5G120200 Prunus persica HOM05D007590 ORTHO05D007875 4.8e-11 70.9 74 56.8
TAR375G1006 Trochodendron aralioides HOM05D007590 ORTHO05D007875 8.3e-11 70.1 74 50.0
Ciclev10022592m.g Citrus clementina HOM05D007590 ORTHO05D007875 1.8e-10 68.9 73 49.3
Hma1.2p1_1746F.1_g300410 Hydrangea macrophylla HOM05D007590 ORTHO05D007875 1.8e-10 68.9 75 49.3
TAR636G1032 Trochodendron aralioides HOM05D007590 ORTHO05D007875 2.4e-10 68.6 74 51.4
CANSAT21G0370 Cannabis sativa HOM05D007590 ORTHO05D007875 1.2e-09 66.2 73 60.3
Manes.02G009900 Manihot esculenta HOM05D007590 ORTHO05D007875 1.7e-08 62.4 78 51.3
TAR374G1746 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.7e-08 62.4 73 49.3
Peaxi162Scf00102g00178 Petunia axillaris HOM05D007590 ORTHO05D007875 2.2e-08 62.0 73 43.8
Nitab4.5_0002782g0040 Nicotiana tabacum HOM05D007590 ORTHO05D007875 3.8e-08 61.2 77 49.4
Sopen08g030630 Solanum pennellii HOM05D007590 ORTHO05D007875 5.0e-08 60.8 73 49.3
CiPaw.12G082700 Carya illinoinensis HOM05D007590 ORTHO05D007875 6.5e-08 60.5 74 51.4
FAN04G0970 Fragaria x ananassa HOM05D007590 ORTHO05D007875 6.5e-08 60.5 74 55.4
FAN13G0413 Fragaria x ananassa HOM05D007590 ORTHO05D007875 6.5e-08 60.5 74 48.6
Rhsim02G0243500 Rhododendron simsii HOM05D007590 ORTHO05D007875 6.5e-08 60.5 77 48.1
Solyc08g082370.1 Solanum lycopersicum HOM05D007590 ORTHO05D007875 6.5e-08 60.5 73 49.3
FAN08G0943 Fragaria x ananassa HOM05D007590 ORTHO05D007875 8.5e-08 60.1 74 54.1
TAR629G2201 Trochodendron aralioides HOM05D007590 ORTHO05D007875 8.5e-08 60.1 74 50.0
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 1.1e-07 59.7 75 46.7
PGSC0003DMG400012280 Solanum tuberosum HOM05D007590 ORTHO05D007875 1.5e-07 59.3 73 47.9
Lsat_1_v5_gn_6_83961 Lactuca sativa HOM05D007590 ORTHO05D007875 2.5e-07 58.5 74 41.9
Actinidia22161 Actinidia chinensis HOM05D007590 ORTHO05D007875 3.2e-07 58.2 74 56.8
Nitab4.5_0001231g0140 Nicotiana tabacum HOM05D007590 ORTHO05D007875 4.2e-07 57.8 77 46.8
Nn1g01873 Nelumbo nucifera HOM05D007590 ORTHO05D007875 5.5e-07 57.4 74 44.6
LjContig00312_ERROPOS870357g0000452 Lotus japonicus HOM05D007590 ORTHO05D007875 2.1e-06 55.5 75 42.7
RcHm_v2.0_Chr7g0194781 Rosa chinensis HOM05D007590 ORTHO05D007875 2.1e-06 55.5 76 44.7
Lalb_Chr05g0211541 Lupinus albus HOM05D007590 ORTHO05D007875 2.7e-06 55.1 75 44.0
MSTRG.25673 Avicennia marina HOM05D007590 ORTHO05D007875 6.1e-06 53.9 76 40.8
CSS0045762 Camellia sinensis var. sinensis HOM05D007590 ORTHO05D007875 6.1e-06 53.9 71 43.7
HanXRQChr03g0083501 Helianthus annuus HOM05D007590 ORTHO05D007875 6.1e-06 53.9 74 37.8
Potri.001G091500 Populus trichocarpa HOM05D007590 ORTHO05D007875 8.0e-06 53.5 76 46.1


User provided reference genes

Program Settings