Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08748 Corylus avellana HOM05D003118 ORTHO05D003618 0.0e+00 1926.4 963 100.0
Cfa012251 Carpinus fangiana HOM05D003118 ORTHO05D003618 2.1e-300 1035.8 581 92.4
Haze_08750 Corylus avellana HOM05D003118 ORTHO05D003618 1.7e-281 973.0 581 86.7
QL93p0326_0020 Quercus lobata HOM05D003118 ORTHO05D003618 3.7e-188 662.9 605 63.1
QL02p033307 Quercus lobata HOM05D003118 ORTHO05D003618 4.7e-167 592.8 560 62.7
Thecc.03G287000 Theobroma cacao HOM05D003118 ORTHO05D003618 2.8e-127 460.7 595 48.2
Dinv37591 Davidia involucrata HOM05D003118 ORTHO05D003618 5.8e-125 453.0 608 48.8
Prupe.5G107000 Prunus persica HOM05D003118 ORTHO05D003618 1.3e-124 451.8 598 49.2
CiPaw.12G088800 Carya illinoinensis HOM05D003118 ORTHO05D003618 1.9e-123 448.0 568 50.5
Dinv38896 Davidia involucrata HOM05D003118 ORTHO05D003618 1.6e-122 444.9 619 46.4
Duzib205G0707 Durio zibethinus HOM05D003118 ORTHO05D003618 2.1e-122 444.5 594 47.0
MD14G1112600 Malus domestica HOM05D003118 ORTHO05D003618 9.0e-118 429.1 610 46.7
MD06G1091800 Malus domestica HOM05D003118 ORTHO05D003618 3.4e-117 427.2 608 46.1
TAR629G1012 Trochodendron aralioides HOM05D003118 ORTHO05D003618 9.9e-117 425.6 618 45.1
Manes.02G016600 Manihot esculenta HOM05D003118 ORTHO05D003618 1.5e-112 411.8 601 47.1
CSS0022485 Camellia sinensis var. sinensis HOM05D003118 ORTHO05D003618 5.6e-112 409.8 610 45.1
TAR375G0293 Trochodendron aralioides HOM05D003118 ORTHO05D003618 9.6e-112 409.1 615 44.4
Potri.003G133000 Populus trichocarpa HOM05D003118 ORTHO05D003618 1.0e-108 399.1 603 45.6
Gorai.004G137500 Gossypium raimondii HOM05D003118 ORTHO05D003618 2.2e-108 397.9 595 44.2
Actinidia28342 Actinidia chinensis HOM05D003118 ORTHO05D003618 1.0e-105 389.0 623 42.1
Atru.chr9.2107 Acer truncatum HOM05D003118 ORTHO05D003618 6.7e-105 386.3 615 44.7
Sabra03G0095300 Salix brachista HOM05D003118 ORTHO05D003618 9.0e-102 375.9 605 44.3
TWI81G0015 Tripterygium wilfordii HOM05D003118 ORTHO05D003618 1.7e-100 371.7 564 43.6
RcHm_v2.0_Chr7g0196521 Rosa chinensis HOM05D003118 ORTHO05D003618 5.5e-99 366.7 585 43.6
Gohir.D08G134400 Gossypium hirsutum HOM05D003118 ORTHO05D003618 1.3e-97 362.1 592 42.4
Nn6g32462 Nelumbo nucifera HOM05D003118 ORTHO05D003618 1.6e-95 355.1 619 42.5
CsaV3_5G002370 Cucumis sativus L. HOM05D003118 ORTHO05D003618 2.4e-94 351.3 568 42.3
ClCG01G002310 Citrullus lanatus HOM05D003118 ORTHO05D003618 4.1e-94 350.5 572 42.3
Gohir.A08G114000 Gossypium hirsutum HOM05D003118 ORTHO05D003618 5.3e-94 350.1 592 41.6
Hma1.2p1_0216F.1_g091120 Hydrangea macrophylla HOM05D003118 ORTHO05D003618 2.0e-93 348.2 614 41.5
FAN13G0863 Fragaria x ananassa HOM05D003118 ORTHO05D003618 1.0e-92 345.9 585 40.9
FvH4_5g03250 Fragaria vesca HOM05D003118 ORTHO05D003618 2.1e-90 338.2 584 41.1
FAN18G4078 Fragaria x ananassa HOM05D003118 ORTHO05D003618 2.1e-90 338.2 584 41.1
Cc08_g15310 Coffea canephora HOM05D003118 ORTHO05D003618 1.4e-89 335.5 604 39.4
Sed0003885 Sechium edule HOM05D003118 ORTHO05D003618 1.8e-89 335.1 577 40.6
COL.COLO4_08355 Corchorus olitorius HOM05D003118 ORTHO05D003618 1.5e-88 332.0 589 40.7
FAN08G3653 Fragaria x ananassa HOM05D003118 ORTHO05D003618 2.0e-88 331.6 567 40.6
FAN04G2118 Fragaria x ananassa HOM05D003118 ORTHO05D003618 1.4e-86 325.5 581 41.1
Sed0011553 Sechium edule HOM05D003118 ORTHO05D003618 2.4e-86 324.7 562 40.9
Lalb_Chr09g0320801 Lupinus albus HOM05D003118 ORTHO05D003618 4.1e-86 323.9 588 40.1
Ciclev10024541m.g Citrus clementina HOM05D003118 ORTHO05D003618 1.2e-85 322.4 517 44.3
FAN04G2035 Fragaria x ananassa HOM05D003118 ORTHO05D003618 1.5e-85 322.0 569 40.6
Aqoxy7G00197 Aquilegia oxysepala HOM05D003118 ORTHO05D003618 2.1e-82 311.6 588 40.0
TWI14G1154 Tripterygium wilfordii HOM05D003118 ORTHO05D003618 1.8e-81 308.5 592 38.0
Nitab4.5_0005339g0020 Nicotiana tabacum HOM05D003118 ORTHO05D003618 1.5e-80 305.4 594 38.7
Rhsim02G0236100 Rhododendron simsii HOM05D003118 ORTHO05D003618 2.0e-80 305.1 612 37.9
MELO3C005717.2 Cucumis melo HOM05D003118 ORTHO05D003618 7.7e-77 293.1 518 42.3
LjContig00312_ERROPOS870357g0013212 Lotus japonicus HOM05D003118 ORTHO05D003618 1.0e-76 292.7 588 37.4
CiPaw.11G129400 Carya illinoinensis HOM05D003118 ORTHO05D003618 6.5e-76 290.0 318 56.3
PGR042G1679 Punica granatum HOM05D003118 ORTHO05D003618 9.7e-72 276.2 600 37.7
VMungo1215G2430 Vigna mungo HOM05D003118 ORTHO05D003618 2.2e-71 275.0 611 36.0
Phvul.002G160400 Phaseolus vulgaris HOM05D003118 ORTHO05D003618 1.1e-70 272.7 608 37.2
Ca_24533_v3 Cicer arietinum L. HOM05D003118 ORTHO05D003618 1.2e-69 269.2 602 35.5
Psat2g183920 Pisum sativum HOM05D003118 ORTHO05D003618 3.5e-69 267.7 592 37.0
Medtr5g009920 Medicago truncatula HOM05D003118 ORTHO05D003618 6.5e-68 263.5 603 36.2
Solyc08g008130.4 Solanum lycopersicum HOM05D003118 ORTHO05D003618 8.5e-68 263.1 582 37.1
Peaxi162Scf00102g01644 Petunia axillaris HOM05D003118 ORTHO05D003618 1.9e-67 261.9 601 36.3
LjContig00312_ERROPOS870357g0002156 Lotus japonicus HOM05D003118 ORTHO05D003618 7.2e-67 260.0 573 36.1
MBI07_g11721_MAGBIO Magnolia biondii HOM05D003118 ORTHO05D003618 1.4e-65 255.8 586 34.5
Sopen08g003990 Solanum pennellii HOM05D003118 ORTHO05D003618 5.2e-65 253.8 582 36.6
Glyma.11G020900 Glycine max HOM05D003118 ORTHO05D003618 6.8e-65 253.4 602 33.9
arahy.Tifrunner.gnm1.ann1.78DXCF Arachis hypogaea HOM05D003118 ORTHO05D003618 8.8e-65 253.1 581 34.9
Glyma.01G222500 Glycine max HOM05D003118 ORTHO05D003618 1.2e-64 252.7 608 34.7
Sc01g0009900 Simmondsia chinensis HOM05D003118 ORTHO05D003618 3.4e-64 251.1 611 37.2
DCAR_004609 Daucus carota HOM05D003118 ORTHO05D003618 1.7e-63 248.8 576 35.6
vmacro11412 Vaccinium macrocarpon HOM05D003118 ORTHO05D003618 4.8e-63 247.3 547 37.7
MSTRG.13862 Avicennia marina HOM05D003118 ORTHO05D003618 9.1e-62 243.0 596 34.9
Nitab4.5_0002231g0040 Nicotiana tabacum HOM05D003118 ORTHO05D003618 7.7e-61 240.0 581 36.5
arahy.Tifrunner.gnm1.ann1.9S2WM4 Arachis hypogaea HOM05D003118 ORTHO05D003618 2.9e-60 238.0 596 33.4
CANSAT21G1093 Cannabis sativa HOM05D003118 ORTHO05D003618 2.5e-59 235.0 606 35.6
Hund14265 Selenicereus undatus HOM05D003118 ORTHO05D003618 6.8e-57 226.9 587 36.5
TPR.G6616 Trifolium pratense HOM05D003118 ORTHO05D003618 1.2e-56 226.1 562 34.9
Eucgr.E00782 Eucalyptus grandis HOM05D003118 ORTHO05D003618 2.2e-55 221.9 571 32.7
EL10Ac5g12842 Beta vulgaris HOM05D003118 ORTHO05D003618 1.8e-54 218.8 580 32.9
AUR62019759 Chenopodium quinoa HOM05D003118 ORTHO05D003618 1.2e-53 216.1 578 33.6
AUR62010758 Chenopodium quinoa HOM05D003118 ORTHO05D003618 2.7e-53 214.9 565 33.3
Haze_07799 Corylus avellana HOM05D003118 ORTHO05D003618 1.5e-51 209.1 181 63.5
DCAR_000636 Daucus carota HOM05D003118 ORTHO05D003618 9.5e-51 206.5 600 33.5
Ah.12g052020 Amaranthus hybridus HOM05D003118 ORTHO05D003618 8.0e-50 203.4 578 33.0
SHI07074 Sapria himalayana HOM05D003118 ORTHO05D003618 1.4e-49 202.6 582 31.8
PSO266G0031 Papaver somniferum HOM05D003118 ORTHO05D003618 4.0e-49 201.1 624 31.6
Lj2A177T50 Lonicera japonica HOM05D003118 ORTHO05D003618 8.9e-49 199.9 433 40.6
Haze_15568 Corylus avellana HOM05D003118 ORTHO05D003618 1.5e-48 199.1 609 30.5
Hund11431 Selenicereus undatus HOM05D003118 ORTHO05D003618 1.5e-48 199.1 619 30.9
Ah.12g051980 Amaranthus hybridus HOM05D003118 ORTHO05D003618 7.5e-48 196.8 559 32.4
PSO384G4267 Papaver somniferum HOM05D003118 ORTHO05D003618 4.1e-46 191.0 624 31.1
SalBow8G1076 Salvia bowleyana HOM05D003118 ORTHO05D003618 1.6e-45 189.1 564 31.4
Cfa003868 Carpinus fangiana HOM05D003118 ORTHO05D003618 2.0e-45 188.7 607 30.0
Migut.E01210 Erythranthe guttata HOM05D003118 ORTHO05D003618 4.6e-45 187.6 589 31.4
GSVIVG01019423001 Vitis vinifera HOM05D003118 ORTHO05D003618 4.3e-43 181.0 204 49.5
PSO384G4225 Papaver somniferum HOM05D003118 ORTHO05D003618 1.8e-41 175.6 588 30.4
Oeu040820.1 Olea europaea HOM05D003118 ORTHO05D003618 1.2e-40 172.9 439 34.6
QL04p055623 Quercus lobata HOM05D003118 ORTHO05D003618 2.6e-40 171.8 684 28.8
PSO266G0003 Papaver somniferum HOM05D003118 ORTHO05D003618 3.4e-40 171.4 596 30.2
FAN20G1199 Fragaria x ananassa HOM05D000212 ORTHO05D003618 4.4e-40 171.0 553 30.6
PGSC0003DMG402005827 Solanum tuberosum HOM05D003118 ORTHO05D003618 1.7e-36 159.1 447 33.6
GSVIVG01026971001 Vitis vinifera HOM05D003118 ORTHO05D003618 2.3e-36 158.7 569 30.1
Oeu042365.1 Olea europaea HOM05D003118 ORTHO05D003618 4.3e-35 154.5 466 32.8
CANSAT21G0202 Cannabis sativa HOM05D003118 ORTHO05D003618 5.6e-35 154.1 265 36.6
HanXRQChr06g0166221 Helianthus annuus HOM05D003118 ORTHO05D003618 3.6e-34 151.4 597 28.1
HanXRQChr13g0416081 Helianthus annuus HOM05D003118 ORTHO05D003618 2.3e-33 148.7 641 28.5
Lsat_1_v5_gn_3_11501 Lactuca sativa HOM05D003118 ORTHO05D003618 1.2e-32 146.4 574 28.0
PSO170G3062 Papaver somniferum HOM05D003118 ORTHO05D003618 3.7e-31 141.4 606 29.4
PSO063G6388 Papaver somniferum HOM05D003118 ORTHO05D003618 9.2e-30 136.7 604 29.5
ECA240G3271 Erigeron canadensis HOM05D000115 ORTHO05D003618 4.6e-29 134.4 593 27.2
Lsat_1_v5_gn_6_84940 Lactuca sativa HOM05D003118 ORTHO05D003618 1.0e-28 133.3 576 28.0
THA.LOC104809363 Tarenaya hassleriana HOM05D003118 ORTHO05D003618 1.0e-28 133.3 595 27.9
HPP92_000528 Vanilla planifolia HOM05D003118 ORTHO05D003618 3.0e-28 131.7 610 28.4
Os06g0164000 Oryza sativa ssp. japonica HOM05D003118 ORTHO05D003618 3.9e-28 131.3 565 28.5
HanXRQChr17g0533861 Helianthus annuus HOM05D003118 ORTHO05D003618 1.9e-27 129.0 570 27.5
ECA246G2781 Erigeron canadensis HOM05D003118 ORTHO05D003618 9.5e-27 126.7 575 27.3
THA.LOC104823601 Tarenaya hassleriana HOM05D003118 ORTHO05D003618 1.6e-26 125.9 579 26.9
CDE10G1109 Ceratophyllum demersum HOM05D003118 ORTHO05D003618 2.8e-26 125.2 627 28.2
SGA_v2.0_scaffold144G35901 Striga asiatica HOM05D003118 ORTHO05D003618 1.4e-25 122.9 569 27.1
SEGI_20510 Sequoiadendron giganteum HOM05D003118 ORTHO05D003618 7.6e-24 117.1 606 26.2
Sp1g07530 Schrenkiella parvula HOM05D003118 ORTHO05D003618 1.3e-23 116.3 160 40.0
BcaB03g13535 Brassica carinata HOM05D003118 ORTHO05D003618 6.4e-23 114.0 172 38.4
CARHR008810 Cardamine hirsuta HOM05D003118 ORTHO05D003618 8.4e-23 113.6 208 34.6
ATR0721G124 Amborella trichopoda HOM05D003118 ORTHO05D003618 1.4e-22 112.8 706 26.1
A08p34920 Brassica napus HOM05D003118 ORTHO05D003618 1.9e-22 112.5 195 35.9
C08p12330 Brassica napus HOM05D003118 ORTHO05D003618 1.9e-22 112.5 171 39.8
BolC8t48874H Brassica oleracea HOM05D003118 ORTHO05D003618 1.9e-22 112.5 171 39.8
BraA08t35403Z Brassica rapa HOM05D003118 ORTHO05D003618 1.9e-22 112.5 171 39.8
Carub.0007s3389 Capsella rubella HOM05D003118 ORTHO05D003618 3.2e-22 111.7 142 45.8
A06p05760 Brassica napus HOM05D003118 ORTHO05D003618 5.4e-22 110.9 140 42.9
AL7G47820 Arabidopsis lyrata HOM05D003118 ORTHO05D003618 1.2e-21 109.8 148 45.9
Carub.0001s0824 Capsella rubella HOM05D003118 ORTHO05D003618 1.6e-21 109.4 148 39.9
TPR.G24280 Trifolium pratense HOM05D003118 ORTHO05D003618 1.6e-21 109.4 161 40.4
A09p65700 Brassica napus HOM05D003118 ORTHO05D003618 2.1e-21 109.0 171 38.0
Aa31sc17G150 Aethionema arabicum HOM05D003118 ORTHO05D003618 2.7e-21 108.6 146 38.4
TPR.G24909 Trifolium pratense HOM05D003118 ORTHO05D003618 4.6e-21 107.8 151 43.7
Zm00001eb375680 Zea mays HOM05D003118 ORTHO05D003618 7.8e-21 107.1 555 24.9
CARHR287630 Cardamine hirsuta HOM05D003118 ORTHO05D003618 2.3e-20 105.5 141 44.0
Aa31LG9G490 Aethionema arabicum HOM05D003118 ORTHO05D003618 3.0e-20 105.1 274 32.1
HPP92_002884 Vanilla planifolia HOM05D003118 ORTHO05D003618 3.0e-20 105.1 595 25.7
AT5G41580 Arabidopsis thaliana HOM05D003118 ORTHO05D003618 3.9e-20 104.8 148 41.9
HPP92_002895 Vanilla planifolia HOM05D003118 ORTHO05D003618 3.9e-20 104.8 595 25.2
AL1G19340 Arabidopsis lyrata HOM05D003118 ORTHO05D003618 8.6e-20 103.6 277 29.6
BcaC07g41918 Brassica carinata HOM05D003118 ORTHO05D003618 8.6e-20 103.6 171 36.3
CiPaw.01G067900 Carya illinoinensis HOM05D003118 ORTHO05D003618 8.6e-20 103.6 225 29.8
C08p49770 Brassica napus HOM05D003118 ORTHO05D003618 1.5e-19 102.8 171 36.3
BolC8t52504H Brassica oleracea HOM05D003118 ORTHO05D003618 1.5e-19 102.8 171 36.3
Thhalv10027658m.g Eutrema salsugineum HOM05D003118 ORTHO05D003618 2.8e-18 98.6 141 41.8
BcaB02g07884 Brassica carinata HOM05D003118 ORTHO05D003618 1.4e-17 96.3 140 39.3
BolC6t37186H Brassica oleracea HOM05D003118 ORTHO05D003618 5.2e-17 94.4 152 38.2
Cc02_g38610 Coffea canephora HOM05D003118 ORTHO05D003618 6.9e-17 94.0 97 46.4
Sp7g00460 Schrenkiella parvula HOM05D003118 ORTHO05D003618 6.9e-17 94.0 154 35.7
BcaC02g08950 Brassica carinata HOM05D003118 ORTHO05D003618 2.6e-16 92.0 151 39.1
BcaC08g44538 Brassica carinata HOM05D003118 ORTHO05D003618 2.6e-16 92.0 152 37.5
C06p20020 Brassica napus HOM05D003118 ORTHO05D003618 2.6e-16 92.0 152 37.5
Medtr7g063200 Medicago truncatula HOM05D003118 ORTHO05D003618 4.4e-16 91.3 79 51.9
BraA07t29773Z Brassica rapa HOM05D003118 ORTHO05D003618 5.8e-16 90.9 140 38.6
Actinidia27618 Actinidia chinensis HOM05D003118 ORTHO05D003618 2.2e-15 89.0 117 40.2
A07p20860 Brassica napus HOM05D003118 ORTHO05D003618 2.9e-15 88.6 140 37.9
A04p14690 Brassica napus HOM05D003118 ORTHO05D003618 8.4e-15 87.0 151 37.7
C04p48560 Brassica napus HOM05D003118 ORTHO05D003618 8.4e-15 87.0 151 37.7
BolC4t26449H Brassica oleracea HOM05D003118 ORTHO05D003618 8.4e-15 87.0 151 37.7
SGA_v2.0_scaffold173G39132 Striga asiatica HOM05D003118 ORTHO05D003618 8.4e-15 87.0 496 27.0
BcaB06g27629 Brassica carinata HOM05D003118 ORTHO05D003618 1.4e-14 86.3 147 37.4
BraA04t17109Z Brassica rapa HOM05D003118 ORTHO05D003618 1.9e-14 85.9 151 37.1
BraA09t41913Z Brassica rapa HOM05D003118 ORTHO05D003618 5.4e-14 84.3 171 31.0
BcaB07g34111 Brassica carinata HOM05D003118 ORTHO05D003618 1.6e-13 82.8 170 32.9
GSVIVG01026973001 Vitis vinifera HOM05D003118 ORTHO05D003618 1.7e-12 79.3 63 52.4
Cfa002220 Carpinus fangiana HOM05D003118 ORTHO05D003618 8.7e-12 77.0 122 41.0
HanXRQChr04g0120811 Helianthus annuus HOM05D003118 ORTHO05D003618 1.1e-11 76.6 85 38.8
SMO116G0096 Selaginella moellendorffii HOM05D003118 ORTHO05D003898 1.5e-11 76.3 149 30.9
Haze_25282 Corylus avellana HOM05D003118 ORTHO05D165800 1.3e-10 73.2 75 61.3
AagrBONN_evm.TU.Sc2ySwM_228.3604 Anthoceros agrestis HOM05D003118 ORTHO05D003618 2.1e-10 72.4 151 30.5
Pp3c25_1090 Physcomitrium patens HOM05D003118 ORTHO05D003618 8.1e-10 70.5 81 39.5
ECA236G1529 Erigeron canadensis HOM05D003118 ORTHO05D003618 1.4e-09 69.7 138 31.9
Psat7g004040 Pisum sativum HOM05D003118 ORTHO05D003618 3.1e-09 68.6 123 40.7
Actinidia27617 Actinidia chinensis HOM05D003118 ORTHO05D003618 1.5e-08 66.2 129 39.5
HanXRQChr11g0344401 Helianthus annuus HOM05D003118 ORTHO05D003618 1.5e-08 66.2 85 34.1
ECA236G4268 Erigeron canadensis HOM05D003118 ORTHO05D003618 2.0e-08 65.9 96 33.3
Psat5g132840 Pisum sativum HOM05D003118 ORTHO05D003618 2.6e-08 65.5 104 46.2
Mapoly0002s0236 Marchantia polymorpha HOM05D003118 ORTHO05D003618 3.4e-08 65.1 610 24.8
Ah.12g052000 Amaranthus hybridus HOM05D003118 ORTHO05D003618 1.1e-06 60.1 143 32.9


User provided reference genes

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