Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08724 Corylus avellana HOM05D010605 ORTHO05D010031 4.2e-93 344.7 183 100.0
Haze_08727 Corylus avellana HOM05D010605 ORTHO05D010031 4.2e-93 344.7 183 100.0
Cfa012264 Carpinus fangiana HOM05D010605 ORTHO05D010031 5.2e-75 284.6 182 82.4
Haze_08725 Corylus avellana HOM05D010605 ORTHO05D010031 2.6e-66 255.8 189 70.9
Haze_08723 Corylus avellana HOM05D010605 ORTHO05D010031 4.4e-66 255.0 189 70.4
Haze_08721 Corylus avellana HOM05D010605 ORTHO05D010031 4.0e-59 231.9 182 68.7
Cfa012265 Carpinus fangiana HOM05D010605 ORTHO05D010031 2.6e-50 202.6 185 67.6
CiPaw.12G087500 Carya illinoinensis HOM05D010605 ORTHO05D010031 3.9e-46 188.7 176 54.0
CiPaw.12G087400 Carya illinoinensis HOM05D010605 ORTHO05D010031 1.9e-45 186.4 172 55.8
Hma1.2p1_0216F.1_g091240 Hydrangea macrophylla HOM05D010605 ORTHO05D010031 3.2e-40 169.1 195 46.7
CiPaw.11G127200 Carya illinoinensis HOM05D010605 ORTHO05D010031 4.6e-39 165.2 168 51.8
CiPaw.11G127100 Carya illinoinensis HOM05D010605 ORTHO05D010031 1.6e-36 156.8 170 50.0
Dinv37573 Davidia involucrata HOM05D010605 ORTHO05D010031 3.1e-35 152.5 173 45.7
QL02p032625 Quercus lobata HOM05D010605 ORTHO05D010031 1.2e-31 140.6 177 46.9
CSS0007858 Camellia sinensis var. sinensis HOM05D010605 ORTHO05D010031 5.1e-30 135.2 181 41.4
Actinidia28329 Actinidia chinensis HOM05D010605 ORTHO05D010031 1.9e-29 133.3 162 41.4
Lj8P215T31 Lonicera japonica HOM05D010605 ORTHO05D010031 2.5e-29 132.9 177 37.9
Dinv08500 Davidia involucrata HOM05D010605 ORTHO05D010031 1.6e-28 130.2 163 44.8
Oeu042370.1 Olea europaea HOM05D010605 ORTHO05D010031 1.2e-26 124.0 182 39.0
SGA_v2.0_scaffold173G39118 Striga asiatica HOM05D010605 ORTHO05D010031 1.2e-26 124.0 168 39.9
Solyc08g067700.1 Solanum lycopersicum HOM05D010238 ORTHO05D010031 6.3e-12 75.1 221 27.1
Ciclev10010677m.g Citrus clementina HOM05D010238 ORTHO05D010031 1.1e-11 74.3 191 30.4
FAN06G3436 Fragaria x ananassa HOM05D010238 ORTHO05D010031 1.8e-11 73.6 166 33.1
FAN10G1930 Fragaria x ananassa HOM05D010238 ORTHO05D010031 4.1e-11 72.4 166 33.7
Nitab4.5_0003117g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 2.6e-10 69.7 192 27.1
Pp3c8_14250 Physcomitrium patens HOM05D011172 ORTHO05D010031 4.5e-10 68.9 179 26.3
Cfa016331 Carpinus fangiana HOM05D015404 ORTHO05D011570 1.1e-08 64.3 170 27.6
QL09p011993 Quercus lobata HOM05D015404 ORTHO05D011570 1.4e-08 63.9 173 26.6
Prupe.1G469600 Prunus persica HOM05D010238 ORTHO05D010031 2.5e-08 63.2 220 24.5
FAN06G0580 Fragaria x ananassa HOM05D017842 ORTHO05D020741 3.2e-08 62.8 170 27.1
Prupe.1G469500 Prunus persica HOM05D010238 ORTHO05D010031 7.2e-08 61.6 198 23.7
Actinidia13276 Actinidia chinensis HOM05D010238 ORTHO05D010031 1.6e-07 60.5 92 37.0
Nitab4.5_0000125g0370 Nicotiana tabacum HOM05D010238 ORTHO05D010031 3.6e-07 59.3 73 43.8
Oeu027789.1 Olea europaea HOM05D010238 ORTHO05D010031 3.6e-07 59.3 74 44.6
Prupe.1G469800 Prunus persica HOM05D010238 ORTHO05D010031 4.6e-07 58.9 225 24.9
Nitab4.5_0007456g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 1.4e-06 57.4 61 47.5
Pp3c22_6902 Physcomitrium patens HOM05D011172 ORTHO05D010031 1.4e-06 57.4 158 30.4
MD15G1111300 Malus domestica HOM05D010238 ORTHO05D010031 3.0e-06 56.2 209 31.1
Thecc.03G188800 Theobroma cacao HOM05D015404 ORTHO05D010031 3.0e-06 56.2 105 31.4
Pp3c22_6890 Physcomitrium patens HOM05D011172 ORTHO05D010031 3.9e-06 55.8 86 33.7
Pp3c25_13990 Physcomitrium patens HOM05D011172 ORTHO05D010031 3.9e-06 55.8 156 26.3
Prupe.1G470600 Prunus persica HOM05D010238 ORTHO05D010031 5.1e-06 55.5 209 22.5
FAN10G0836 Fragaria x ananassa HOM05D017842 ORTHO05D020741 8.8e-06 54.7 92 30.4
Manes.16G117600 Manihot esculenta HOM05D017842 ORTHO05D020741 8.8e-06 54.7 165 24.2


User provided reference genes

Program Settings