Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08723 Corylus avellana HOM05D010605 ORTHO05D010031 3.3e-107 391.7 198 100.0
Haze_08725 Corylus avellana HOM05D010605 ORTHO05D010031 5.6e-107 391.0 198 99.5
Cfa012264 Carpinus fangiana HOM05D010605 ORTHO05D010031 1.6e-69 266.5 196 71.9
Haze_08724 Corylus avellana HOM05D010605 ORTHO05D010031 6.9e-65 251.1 189 70.4
Haze_08727 Corylus avellana HOM05D010605 ORTHO05D010031 6.9e-65 251.1 189 70.4
Haze_08721 Corylus avellana HOM05D010605 ORTHO05D010031 7.9e-61 237.7 200 62.0
Cfa012265 Carpinus fangiana HOM05D010605 ORTHO05D010031 3.8e-55 218.8 202 64.4
CiPaw.12G087500 Carya illinoinensis HOM05D010605 ORTHO05D010031 6.5e-47 191.4 182 54.9
CiPaw.12G087400 Carya illinoinensis HOM05D010605 ORTHO05D010031 8.5e-47 191.0 179 56.4
Hma1.2p1_0216F.1_g091240 Hydrangea macrophylla HOM05D010605 ORTHO05D010031 1.1e-43 180.6 188 51.6
Dinv37573 Davidia involucrata HOM05D010605 ORTHO05D010031 1.4e-38 163.7 174 50.0
CiPaw.11G127200 Carya illinoinensis HOM05D010605 ORTHO05D010031 2.7e-37 159.5 174 48.9
CiPaw.11G127100 Carya illinoinensis HOM05D010605 ORTHO05D010031 3.0e-36 156.0 176 47.7
QL02p032625 Quercus lobata HOM05D010605 ORTHO05D010031 7.4e-35 151.4 192 44.8
CSS0007858 Camellia sinensis var. sinensis HOM05D010605 ORTHO05D010031 9.1e-33 144.4 182 44.5
Actinidia28329 Actinidia chinensis HOM05D010605 ORTHO05D010031 3.5e-32 142.5 166 44.6
Dinv08500 Davidia involucrata HOM05D010605 ORTHO05D010031 6.1e-29 131.7 165 46.7
Lj8P215T31 Lonicera japonica HOM05D010605 ORTHO05D010031 4.0e-28 129.0 181 38.1
Oeu042370.1 Olea europaea HOM05D010605 ORTHO05D010031 6.7e-28 128.3 184 40.8
SGA_v2.0_scaffold173G39118 Striga asiatica HOM05D010605 ORTHO05D010031 1.6e-24 117.1 174 37.9
Ciclev10010677m.g Citrus clementina HOM05D010238 ORTHO05D010031 4.2e-14 82.4 195 30.3
Cfa016331 Carpinus fangiana HOM05D015404 ORTHO05D011570 9.4e-14 81.3 186 30.1
Nitab4.5_0003117g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 6.1e-13 78.6 191 29.8
FAN10G1930 Fragaria x ananassa HOM05D010238 ORTHO05D010031 4.0e-12 75.9 181 30.9
CDE10G0521 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 8.8e-12 74.7 176 26.7
Solyc08g067700.1 Solanum lycopersicum HOM05D010238 ORTHO05D010031 1.2e-11 74.3 222 27.9
QL09p011993 Quercus lobata HOM05D015404 ORTHO05D011570 7.5e-11 71.6 168 28.0
FAN06G3436 Fragaria x ananassa HOM05D010238 ORTHO05D010031 1.7e-10 70.5 173 31.8
Nitab4.5_0000125g0370 Nicotiana tabacum HOM05D010238 ORTHO05D010031 6.3e-10 68.6 74 47.3
MD15G1111300 Malus domestica HOM05D010238 ORTHO05D010031 1.1e-09 67.8 221 25.8
Prupe.1G470100 Prunus persica HOM05D010238 ORTHO05D010031 1.1e-09 67.8 210 26.2
Thecc.03G188800 Theobroma cacao HOM05D015404 ORTHO05D010031 1.4e-09 67.4 88 39.8
Manes.16G117600 Manihot esculenta HOM05D017842 ORTHO05D020741 1.8e-09 67.0 171 26.3
Prupe.1G469800 Prunus persica HOM05D010238 ORTHO05D010031 2.4e-09 66.6 225 27.6
Sopen08g021610 Solanum pennellii HOM05D031006 ORTHO05D030675 3.1e-09 66.2 102 38.2
Haze_16765 Corylus avellana HOM05D015404 ORTHO05D011570 4.1e-09 65.9 97 34.0
Nitab4.5_0007456g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 4.1e-09 65.9 71 47.9
Prupe.1G470400 Prunus persica HOM05D010238 ORTHO05D010031 5.4e-09 65.5 210 27.6
Prupe.1G470600 Prunus persica HOM05D010238 ORTHO05D010031 5.4e-09 65.5 209 24.4
Actinidia13276 Actinidia chinensis HOM05D010238 ORTHO05D010031 1.6e-08 63.9 107 35.5
Hma1.2p1_0175F.1_g077090 Hydrangea macrophylla HOM05D010238 ORTHO05D010031 4.5e-08 62.4 96 31.2
Pp3c8_14250 Physcomitrium patens HOM05D011172 ORTHO05D010031 4.5e-08 62.4 185 25.9
CiPaw.05G259800 Carya illinoinensis HOM05D015404 ORTHO05D011570 1.0e-07 61.2 177 26.6
Oeu027789.1 Olea europaea HOM05D010238 ORTHO05D010031 1.0e-07 61.2 87 37.9
Prupe.1G469600 Prunus persica HOM05D010238 ORTHO05D010031 1.0e-07 61.2 219 25.1
Gohir.D12G254800 Gossypium hirsutum HOM05D015404 ORTHO05D011570 5.0e-07 58.9 92 33.7
Prupe.1G469500 Prunus persica HOM05D010238 ORTHO05D010031 5.0e-07 58.9 179 26.8
RcHm_v2.0_Chr1g0379631 Rosa chinensis HOM05D015404 ORTHO05D011570 5.0e-07 58.9 97 32.0
CiPaw.08G129800 Carya illinoinensis HOM05D015404 ORTHO05D011570 6.6e-07 58.5 181 25.4
FAN10G0836 Fragaria x ananassa HOM05D017842 ORTHO05D020741 6.6e-07 58.5 87 31.0
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 1.5e-06 57.4 80 38.8
Rhsim02G0192000 Rhododendron simsii HOM05D010927 ORTHO05D010031 3.3e-06 56.2 186 24.7
Prupe.1G470500 Prunus persica HOM05D010238 ORTHO05D010031 4.3e-06 55.8 69 42.0
FAN06G0580 Fragaria x ananassa HOM05D017842 ORTHO05D020741 5.6e-06 55.5 168 25.0


User provided reference genes

Program Settings