Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08721 Corylus avellana HOM05D010605 ORTHO05D010031 4.3e-104 381.3 191 100.0
Haze_08723 Corylus avellana HOM05D010605 ORTHO05D010031 1.3e-60 236.9 200 62.0
Haze_08725 Corylus avellana HOM05D010605 ORTHO05D010031 1.7e-60 236.5 200 62.0
Cfa012264 Carpinus fangiana HOM05D010605 ORTHO05D010031 3.2e-59 232.3 191 66.0
Cfa012265 Carpinus fangiana HOM05D010605 ORTHO05D010031 7.9e-58 227.6 181 68.5
Haze_08724 Corylus avellana HOM05D010605 ORTHO05D010031 7.9e-58 227.6 182 68.7
Haze_08727 Corylus avellana HOM05D010605 ORTHO05D010031 7.9e-58 227.6 182 68.7
CiPaw.12G087500 Carya illinoinensis HOM05D010605 ORTHO05D010031 3.0e-41 172.6 180 54.4
QL02p032625 Quercus lobata HOM05D010605 ORTHO05D010031 7.4e-40 167.9 188 51.6
CiPaw.12G087400 Carya illinoinensis HOM05D010605 ORTHO05D010031 8.2e-39 164.5 176 54.0
CiPaw.11G127100 Carya illinoinensis HOM05D010605 ORTHO05D010031 4.1e-38 162.2 172 50.6
Hma1.2p1_0216F.1_g091240 Hydrangea macrophylla HOM05D010605 ORTHO05D010031 4.1e-38 162.2 188 48.4
CiPaw.11G127200 Carya illinoinensis HOM05D010605 ORTHO05D010031 9.1e-38 161.0 167 51.5
Dinv37573 Davidia involucrata HOM05D010605 ORTHO05D010031 7.9e-34 147.9 171 48.5
Dinv08500 Davidia involucrata HOM05D010605 ORTHO05D010031 2.2e-28 129.8 160 43.8
CSS0007858 Camellia sinensis var. sinensis HOM05D010605 ORTHO05D010031 8.5e-28 127.9 183 42.1
Oeu042370.1 Olea europaea HOM05D010605 ORTHO05D010031 2.5e-27 126.3 179 41.9
Actinidia28329 Actinidia chinensis HOM05D010605 ORTHO05D010031 2.7e-26 122.9 169 40.2
Lj8P215T31 Lonicera japonica HOM05D010605 ORTHO05D010031 2.7e-26 122.9 177 37.9
SGA_v2.0_scaffold173G39118 Striga asiatica HOM05D010605 ORTHO05D010031 6.3e-23 111.7 168 38.1
Ciclev10010677m.g Citrus clementina HOM05D010238 ORTHO05D010031 3.3e-16 89.4 192 32.8
CDE10G0521 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 6.3e-15 85.1 168 28.0
Cfa016331 Carpinus fangiana HOM05D015404 ORTHO05D011570 2.4e-14 83.2 169 30.8
Nitab4.5_0003117g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 1.6e-13 80.5 189 30.2
Solyc08g067700.1 Solanum lycopersicum HOM05D010238 ORTHO05D010031 4.2e-11 72.4 204 28.4
FAN06G0580 Fragaria x ananassa HOM05D017842 ORTHO05D020741 3.6e-10 69.3 177 31.1
FAN10G1930 Fragaria x ananassa HOM05D010238 ORTHO05D010031 4.7e-10 68.9 167 30.5
QL09p011993 Quercus lobata HOM05D015404 ORTHO05D011570 1.0e-09 67.8 158 27.8
Actinidia13276 Actinidia chinensis HOM05D010238 ORTHO05D010031 4.0e-09 65.9 96 38.5
FAN10G0836 Fragaria x ananassa HOM05D017842 ORTHO05D020741 6.8e-09 65.1 100 35.0
Prupe.1G469500 Prunus persica HOM05D010238 ORTHO05D010031 6.8e-09 65.1 216 28.7
Pp3c8_14250 Physcomitrium patens HOM05D011172 ORTHO05D010031 8.8e-09 64.7 176 26.7
Manes.16G117600 Manihot esculenta HOM05D017842 ORTHO05D020741 1.2e-08 64.3 161 26.1
Prupe.1G470100 Prunus persica HOM05D010238 ORTHO05D010031 1.2e-08 64.3 215 25.6
Nitab4.5_0000125g0370 Nicotiana tabacum HOM05D010238 ORTHO05D010031 1.5e-08 63.9 73 43.8
Nitab4.5_0007456g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 2.0e-08 63.5 80 41.2
Prupe.1G469600 Prunus persica HOM05D010238 ORTHO05D010031 2.0e-08 63.5 227 29.5
Hma1.2p1_0175F.1_g077090 Hydrangea macrophylla HOM05D010238 ORTHO05D010031 2.6e-08 63.2 81 42.0
CiPaw.05G259800 Carya illinoinensis HOM05D015404 ORTHO05D011570 5.7e-08 62.0 170 26.5
FAN06G3436 Fragaria x ananassa HOM05D010238 ORTHO05D010031 5.7e-08 62.0 167 30.5
Pp3c25_13990 Physcomitrium patens HOM05D011172 ORTHO05D010031 9.8e-08 61.2 154 27.3
Prupe.1G469800 Prunus persica HOM05D010238 ORTHO05D010031 9.8e-08 61.2 231 26.4
Prupe.1G470600 Prunus persica HOM05D010238 ORTHO05D010031 2.2e-07 60.1 215 26.0
CiPaw.08G129800 Carya illinoinensis HOM05D015404 ORTHO05D011570 3.7e-07 59.3 174 25.9
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 3.7e-07 59.3 65 49.2
Oeu027789.1 Olea europaea HOM05D010238 ORTHO05D010031 4.8e-07 58.9 68 45.6
Pp3c22_6890 Physcomitrium patens HOM05D011172 ORTHO05D010031 4.8e-07 58.9 78 34.6
Sopen08g021610 Solanum pennellii HOM05D031006 ORTHO05D030675 8.3e-07 58.2 100 35.0
Prupe.1G470400 Prunus persica HOM05D010238 ORTHO05D010031 1.1e-06 57.8 190 27.9
Haze_16765 Corylus avellana HOM05D015404 ORTHO05D011570 3.1e-06 56.2 97 32.0
Thecc.03G188800 Theobroma cacao HOM05D015404 ORTHO05D010031 3.1e-06 56.2 86 33.7
Cc06_g13000 Coffea canephora HOM05D010238 ORTHO05D010031 4.1e-06 55.8 79 45.6
MD15G1111300 Malus domestica HOM05D010238 ORTHO05D010031 4.1e-06 55.8 220 24.1
Prupe.1G470500 Prunus persica HOM05D010238 ORTHO05D010031 4.1e-06 55.8 74 43.2
Pp3c22_6902 Physcomitrium patens HOM05D011172 ORTHO05D010031 5.4e-06 55.5 157 27.4
TPR.G23939 Trifolium pratense HOM05D010238 ORTHO05D010031 7.0e-06 55.1 98 35.7


User provided reference genes

Program Settings