Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 7.7e-197 690.3 344 100.0
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 1.6e-186 656.0 370 90.0
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 3.4e-160 568.5 368 79.3
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 7.8e-149 530.8 363 74.7
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 9.6e-147 523.9 361 73.1
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 2.8e-146 522.3 361 72.9
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 6.2e-146 521.2 363 72.2
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 2.4e-145 519.2 369 71.8
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.5e-144 516.5 363 71.6
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 5.8e-144 514.6 359 72.1
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 3.8e-143 511.9 361 71.5
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 2.7e-141 505.8 397 65.5
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 2.3e-140 502.7 358 69.8
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 3.0e-140 502.3 371 67.9
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 5.1e-140 501.5 361 70.4
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 8.7e-140 500.7 353 72.2
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 2.5e-139 499.2 362 68.8
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 3.3e-139 498.8 364 69.5
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.1e-138 496.1 353 70.8
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 8.1e-138 494.2 362 69.1
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 2.6e-136 489.2 366 67.5
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 2.9e-135 485.7 362 69.1
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 3.2e-134 482.3 362 66.3
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 4.2e-134 481.9 362 66.9
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 2.7e-133 479.2 362 66.3
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 2.7e-133 479.2 362 65.7
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 1.0e-132 477.2 367 65.1
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 1.8e-132 476.5 359 67.7
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 6.7e-132 474.6 367 66.5
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 1.1e-131 473.8 355 67.6
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 1.9e-131 473.0 350 66.6
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 4.3e-131 471.9 362 66.0
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 7.4e-131 471.1 354 66.7
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 1.3e-130 470.3 368 65.8
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 1.3e-130 470.3 368 65.8
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 1.3e-130 470.3 368 65.8
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 1.6e-130 469.9 367 65.7
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 3.7e-130 468.8 361 64.5
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 1.8e-129 466.5 356 67.1
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 3.1e-129 465.7 356 66.6
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 5.8e-128 461.5 351 66.4
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 1.3e-127 460.3 356 66.3
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 1.3e-127 460.3 352 66.2
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.3e-127 460.3 351 66.1
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 1.7e-127 459.9 351 67.5
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 6.5e-127 458.0 351 66.1
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 8.4e-127 457.6 324 70.4
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 1.4e-126 456.8 324 69.8
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 3.2e-126 455.7 371 66.0
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 4.2e-126 455.3 318 73.3
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 5.5e-126 454.9 364 63.7
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 2.1e-125 453.0 364 63.2
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 2.7e-125 452.6 363 63.4
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 2.7e-125 452.6 359 62.1
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 2.7e-125 452.6 364 62.9
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 4.6e-125 451.8 353 63.7
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 7.9e-125 451.1 355 65.6
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 7.9e-125 451.1 354 65.0
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 1.0e-124 450.7 360 65.3
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 3.0e-124 449.1 353 64.3
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 3.9e-124 448.7 355 64.5
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 1.5e-123 446.8 318 71.1
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 2.5e-123 446.0 355 63.4
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 4.3e-123 445.3 351 64.4
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 1.6e-122 443.4 362 63.3
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 6.2e-122 441.4 397 59.4
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 8.2e-122 441.0 415 57.1
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 1.4e-121 440.3 362 64.6
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 1.2e-120 437.2 362 61.6
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 5.0e-119 431.8 354 62.7
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 5.5e-118 428.3 359 61.0
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 2.7e-117 426.0 351 60.7
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 1.1e-110 404.1 290 71.7
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 9.4e-110 401.0 357 56.9
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.2e-109 400.6 362 58.0
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 1.6e-109 400.2 315 65.4
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.6e-109 400.2 325 61.8
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 7.9e-109 397.9 351 56.1
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 1.7e-106 390.2 362 55.2
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 2.0e-104 383.3 340 59.4
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 5.9e-96 355.1 247 75.3
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 2.8e-90 336.3 231 73.2
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 9.1e-89 331.3 345 49.9
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 3.5e-88 329.3 328 50.3
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 8.8e-84 314.7 350 50.6
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 8.8e-84 314.7 351 49.3
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 1.3e-82 310.8 329 50.8
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 2.6e-75 286.6 209 69.4
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 4.1e-73 279.3 278 56.1
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 7.0e-73 278.5 337 46.0
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 1.3e-63 247.7 179 68.2
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 2.1e-53 213.8 489 31.9
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 2.3e-52 210.3 187 58.3
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 3.7e-42 176.4 169 55.6
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 4.9e-34 149.4 141 53.2
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 4.3e-30 136.3 130 54.6
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 4.3e-30 136.3 130 54.6
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 9.6e-30 135.2 209 39.2
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.6e-21 107.8 91 53.8
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 1.3e-18 98.2 90 47.8
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 4.2e-17 93.2 86 46.5
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 6.2e-13 79.3 55 76.4
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 9.6e-06 55.5 74 44.6


User provided reference genes

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