Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08668 Corylus avellana HOM05D000003 ORTHO05D000004 9.8e-82 306.6 140 100.0
Haze_05255 Corylus avellana HOM05D000111 ORTHO05D001334 1.9e-13 79.7 58 56.9
CiPaw.05G068400 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.7e-12 75.5 57 56.1
CiPaw.15G109000 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.8e-12 75.1 62 51.6
CiPaw.11G093000 Carya illinoinensis HOM05D000003 ORTHO05D000004 8.2e-12 74.3 70 50.0
QL03p039168 Quercus lobata HOM05D000003 ORTHO05D000167 8.2e-12 74.3 72 45.8
QL05p036409 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-11 73.9 81 45.7
CiPaw.07G081000 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.4e-11 73.6 72 47.2
CiPaw.06G052300 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.8e-11 73.2 59 50.8
QL04p002075 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-11 73.2 77 45.5
CiPaw.16G076300 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.4e-11 72.8 57 52.6
QL04p088840 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-11 72.8 77 44.2
QL05p026414 Quercus lobata HOM05D000103 ORTHO05D000049 3.1e-11 72.4 105 40.0
CiPaw.10G141100 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.1e-11 72.0 47 61.7
QL11p037218 Quercus lobata HOM05D000130 ORTHO05D000004 4.1e-11 72.0 74 41.9
QL10p051120 Quercus lobata HOM05D000005 ORTHO05D000012 5.3e-11 71.6 72 48.6
CiPaw.08G120100 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.9e-11 71.2 57 52.6
QL05p052024 Quercus lobata HOM05D000003 ORTHO05D000004 6.9e-11 71.2 64 50.0
QL02p041162 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-10 70.5 76 43.4
QL05p064920 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-10 70.5 57 49.1
QL09p019305 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-10 70.5 62 48.4
CiPaw.09G152300 Carya illinoinensis HOM05D000003 ORTHO05D000167 1.5e-10 70.1 59 47.5
CiPaw.14G093100 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.5e-10 70.1 83 41.0
QL04p088136 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-10 70.1 79 41.8
Haze_27354 Corylus avellana HOM05D000003 ORTHO05D000004 2.0e-10 69.7 61 47.5
QL05p014002 Quercus lobata HOM05D000003 ORTHO05D000004 2.0e-10 69.7 53 54.7
QL05p017790 Quercus lobata HOM05D000003 ORTHO05D000167 2.0e-10 69.7 52 53.8
QL09p000062 Quercus lobata HOM05D000003 ORTHO05D000004 2.6e-10 69.3 78 41.0
QL09p019629 Quercus lobata HOM05D000003 ORTHO05D000004 2.6e-10 69.3 76 42.1
CiPaw.13G135400 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.4e-10 68.9 49 51.0
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 3.4e-10 68.9 73 39.7
QL03p020372 Quercus lobata HOM05D000003 ORTHO05D000004 5.9e-10 68.2 77 45.5
QL04p067637 Quercus lobata HOM05D000003 ORTHO05D000004 7.6e-10 67.8 66 51.5
QL09p011339 Quercus lobata HOM05D000003 ORTHO05D000006 7.6e-10 67.8 78 46.2
QL02p007660 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-09 67.4 63 46.0
CiPaw.16G041700 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.7e-09 66.6 92 39.1
CiPaw.09G167800 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.2e-09 66.2 72 44.4
CiPaw.15G073500 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.2e-09 66.2 49 53.1
QL10p056321 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-09 66.2 67 46.3
Prupe.7G049300 Prunus persica HOM05D000003 ORTHO05D000004 3.8e-09 65.5 66 45.5
QL02p052601 Quercus lobata HOM05D000003 ORTHO05D000004 3.8e-09 65.5 58 44.8
QL09p031838 Quercus lobata HOM05D000003 ORTHO05D000004 3.8e-09 65.5 78 44.9
QL05p002907 Quercus lobata HOM05D000003 ORTHO05D000004 5.0e-09 65.1 75 41.3
CSS0044445 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000004 1.1e-08 63.9 64 48.4
Haze_10890 Corylus avellana HOM05D007313 ORTHO05D005299 1.1e-08 63.9 65 46.2
QL11p053175 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-08 63.5 67 40.3
CiPaw.16G069900 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.9e-08 63.2 57 49.1
QL02p000576 Quercus lobata HOM05D002132 ORTHO05D002168 1.9e-08 63.2 77 40.3
QL11p012750 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-08 63.2 79 39.2
CiPaw.03G161500 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.5e-08 62.8 61 45.9
QL12p030327 Quercus lobata HOM05D000003 ORTHO05D000004 2.5e-08 62.8 48 47.9
QL04p039404 Quercus lobata HOM05D000003 ORTHO05D000004 4.2e-08 62.0 61 47.5
QL05p030558 Quercus lobata HOM05D000003 ORTHO05D000004 4.2e-08 62.0 63 42.9
CiPaw.05G213600 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.5e-08 61.6 62 45.2
CiPaw.08G150600 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.5e-08 61.6 48 60.4
CiPaw.14G039600 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.5e-08 61.6 80 42.5
QL09p015564 Quercus lobata HOM05D000003 ORTHO05D000004 5.5e-08 61.6 53 49.1
QL10p062138 Quercus lobata HOM05D000003 ORTHO05D000004 5.5e-08 61.6 58 43.1
QL10p062985 Quercus lobata HOM05D000003 ORTHO05D000004 5.5e-08 61.6 58 43.1
Prupe.1G197300 Prunus persica HOM05D000003 ORTHO05D000004 7.2e-08 61.2 48 52.1
QL01p005053 Quercus lobata HOM05D000003 ORTHO05D000004 7.2e-08 61.2 53 49.1
QL03p006515 Quercus lobata HOM05D000003 ORTHO05D000004 7.2e-08 61.2 76 38.2
QL05p002207 Quercus lobata HOM05D000003 ORTHO05D000167 7.2e-08 61.2 101 33.7
CiPaw.15G051200 Carya illinoinensis HOM05D000003 ORTHO05D000004 9.3e-08 60.8 62 41.9
QL12p025805 Quercus lobata HOM05D000967 ORTHO05D000796 9.3e-08 60.8 58 44.8
Lj6g0001642 Lotus japonicus HOM05D000003 ORTHO05D000167 1.2e-07 60.5 95 33.7
QL01p039135 Quercus lobata HOM05D000003 ORTHO05D000006 1.2e-07 60.5 63 42.9
QL05p065576 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-07 60.5 58 44.8
QL03p005847 Quercus lobata HOM05D000003 ORTHO05D000004 1.6e-07 60.1 47 53.2
CiPaw.01G096600 Carya illinoinensis HOM05D000003 ORTHO05D000167 2.1e-07 59.7 57 47.4
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 2.1e-07 59.7 64 40.6
QL12p025216 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-07 59.7 53 45.3
TWI18G0223 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.7e-07 59.3 57 47.4
Prupe.3G063400 Prunus persica HOM05D000003 ORTHO05D000167 3.6e-07 58.9 48 50.0
QL06p011007 Quercus lobata HOM05D000003 ORTHO05D000004 3.6e-07 58.9 63 42.9
TWI14G0340 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.6e-07 58.5 56 42.9
TWI31G1374 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.6e-07 58.5 56 42.9
QL03p053290 Quercus lobata HOM05D000003 ORTHO05D000004 6.1e-07 58.2 58 41.4
QL08p018981 Quercus lobata HOM05D000003 ORTHO05D000004 6.1e-07 58.2 53 49.1
TWI32G0681 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 6.1e-07 58.2 56 42.9
Atru.chr12.350 Acer truncatum HOM05D000003 ORTHO05D000167 7.9e-07 57.8 98 33.7
CiPaw.07G085700 Carya illinoinensis HOM05D000003 ORTHO05D000004 7.9e-07 57.8 49 42.9
QL02p036374 Quercus lobata HOM05D000003 ORTHO05D000004 7.9e-07 57.8 63 44.4
QL08p047630 Quercus lobata HOM05D000003 ORTHO05D000004 7.9e-07 57.8 63 42.9
QL10p055856 Quercus lobata HOM05D000003 ORTHO05D000004 7.9e-07 57.8 70 40.0
TWI23G0529 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 7.9e-07 57.8 57 40.4
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 7.9e-07 57.8 56 42.9
Atru.chr8.816 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-06 57.4 48 45.8
QL02p054803 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-06 57.4 53 45.3
QL05p012339 Quercus lobata HOM05D000003 ORTHO05D000167 1.0e-06 57.4 52 44.2
TAR211G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.0e-06 57.4 64 39.1
Glyma.08G301200 Glycine max HOM05D000005 ORTHO05D000012 1.3e-06 57.0 57 47.4
QL11p055311 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-06 57.0 63 41.3
QL02p022361 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-06 56.6 63 39.7
QL06p031073 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-06 56.6 87 34.5
QL09p017510 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-06 56.6 76 36.8
Atru.chr5.1907 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-06 56.2 51 47.1
Atru.chr8.1143 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-06 56.2 47 42.6
Sed0016145 Sechium edule HOM05D000003 ORTHO05D000004 2.3e-06 56.2 57 40.4
QL04p073918 Quercus lobata HOM05D000003 ORTHO05D000004 3.0e-06 55.8 63 38.1
Atru.chr1.2568 Acer truncatum HOM05D000003 ORTHO05D000004 3.9e-06 55.5 52 42.3
CANSAT78G0390 Cannabis sativa HOM05D000003 ORTHO05D000004 3.9e-06 55.5 64 37.5
CiPaw.13G119100 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.9e-06 55.5 47 42.6
CiPaw.16G035600 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.9e-06 55.5 42 47.6
COL.COLO4_15583 Corchorus olitorius HOM05D000003 ORTHO05D000004 3.9e-06 55.5 70 40.0
QL02p011750 Quercus lobata HOM05D000003 ORTHO05D000004 3.9e-06 55.5 52 46.2
QL02p087863 Quercus lobata HOM05D000003 ORTHO05D000004 3.9e-06 55.5 63 39.7
QL08p025789 Quercus lobata HOM05D000003 ORTHO05D000004 3.9e-06 55.5 48 43.8
Atru.chr6.278 Acer truncatum HOM05D000003 ORTHO05D000004 5.1e-06 55.1 48 45.8
Atru.chr9.913 Acer truncatum HOM05D000003 ORTHO05D000004 5.1e-06 55.1 45 48.9
CANSAT78G1435 Cannabis sativa HOM05D000003 ORTHO05D000004 5.1e-06 55.1 66 40.9
CANSAT80G2424 Cannabis sativa HOM05D000003 ORTHO05D000004 5.1e-06 55.1 51 43.1
CiPaw.03G190200 Carya illinoinensis HOM05D000003 ORTHO05D000167 5.1e-06 55.1 47 44.7
QL10p043402 Quercus lobata HOM05D000003 ORTHO05D000004 5.1e-06 55.1 58 43.1
TWI75G0193 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 5.1e-06 55.1 51 43.1
Atru.chr11.920 Acer truncatum HOM05D000003 ORTHO05D000004 6.7e-06 54.7 53 47.2
Atru.chr2.2282 Acer truncatum HOM05D000003 ORTHO05D000004 6.7e-06 54.7 73 42.5
Atru.chr5.3359 Acer truncatum HOM05D000003 ORTHO05D000004 6.7e-06 54.7 76 34.2
QL09p000395 Quercus lobata HOM05D000003 ORTHO05D000004 6.7e-06 54.7 63 39.7
Atru.chr8.605 Acer truncatum HOM05D000003 ORTHO05D000167 8.7e-06 54.3 47 44.7
CSS0013490 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 8.7e-06 54.3 48 50.0
FvH4_5g31282 Fragaria vesca HOM05D000003 ORTHO05D000004 8.7e-06 54.3 48 43.8
QL09p016157 Quercus lobata HOM05D000003 ORTHO05D000004 8.7e-06 54.3 63 41.3


User provided reference genes

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