Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 7.4e-178 627.1 316 100.0
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 6.3e-169 597.4 304 98.0
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 1.4e-157 559.7 304 92.8
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 1.4e-155 553.1 312 89.1
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 3.0e-147 525.4 304 86.2
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 2.6e-146 522.3 304 86.2
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 3.3e-146 521.9 306 85.0
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 4.4e-146 521.5 299 86.3
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 2.2e-145 519.2 311 82.3
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 2.2e-145 519.2 304 86.8
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 1.1e-144 516.9 304 85.2
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 1.1e-144 516.9 304 85.5
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 1.8e-144 516.2 304 83.9
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 5.3e-144 514.6 304 84.2
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 2.0e-143 512.7 304 85.2
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 2.0e-143 512.7 304 84.2
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 3.5e-143 511.9 304 84.9
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 1.3e-142 510.0 304 81.2
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.3e-142 510.0 299 85.3
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 1.7e-142 509.6 316 82.6
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 2.9e-142 508.8 304 84.9
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 6.5e-142 507.7 304 82.9
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.5e-141 506.5 300 84.7
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 1.9e-141 506.1 300 85.0
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 7.2e-141 504.2 304 81.9
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 1.2e-140 503.4 297 82.8
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.6e-140 503.1 304 82.6
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 2.7e-140 502.3 304 80.3
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.6e-140 501.9 302 82.8
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 3.6e-140 501.9 305 80.7
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.8e-139 499.6 310 81.3
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 3.0e-139 498.8 311 80.7
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 3.0e-139 498.8 304 82.2
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 4.0e-139 498.4 305 81.3
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 4.0e-139 498.4 305 81.3
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 4.0e-139 498.4 304 80.3
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 5.2e-139 498.0 304 82.9
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 2.0e-138 496.1 304 82.2
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 3.4e-138 495.4 304 79.6
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 4.4e-138 495.0 304 78.9
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 5.7e-138 494.6 304 81.6
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 7.5e-138 494.2 304 79.3
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 9.7e-138 493.8 304 79.3
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 1.3e-137 493.4 304 81.2
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 1.3e-137 493.4 304 80.9
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 1.7e-137 493.0 304 79.3
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 1.7e-137 493.0 304 80.9
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 2.2e-137 492.7 304 80.6
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 2.8e-137 492.3 304 81.2
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 6.3e-137 491.1 304 80.3
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 6.3e-137 491.1 304 79.9
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 6.3e-137 491.1 304 79.9
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 2.4e-136 489.2 304 79.3
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 3.1e-136 488.8 304 80.9
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 4.1e-136 488.4 304 79.6
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 2.0e-135 486.1 305 79.3
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 2.0e-135 486.1 306 79.4
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 2.7e-135 485.7 292 85.3
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 2.2e-134 482.6 304 80.3
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 2.9e-134 482.3 304 79.6
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 6.5e-134 481.1 306 77.5
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 6.5e-134 481.1 306 77.5
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 1.5e-133 479.9 306 77.1
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 2.5e-133 479.2 304 77.0
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 3.2e-133 478.8 306 77.1
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 4.2e-133 478.4 304 79.3
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 5.5e-133 478.0 306 76.8
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 7.2e-133 477.6 306 76.5
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 4.0e-131 471.9 306 78.1
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 6.8e-131 471.1 308 77.6
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 1.2e-130 470.3 306 77.8
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.5e-130 469.9 311 76.2
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 1.5e-130 469.9 300 77.7
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 2.0e-130 469.5 306 76.1
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 7.5e-130 467.6 304 76.3
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 9.8e-130 467.2 310 76.5
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 3.7e-129 465.3 300 77.0
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 8.3e-129 464.2 304 75.3
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 7.0e-128 461.1 306 77.1
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 1.6e-127 459.9 300 77.0
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 2.0e-127 459.5 306 76.8
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.5e-125 453.4 283 80.6
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 1.0e-118 430.6 297 70.7
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 2.3e-118 429.5 262 82.4
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 1.6e-116 423.3 315 67.3
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 6.1e-116 421.4 300 71.0
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 4.0e-115 418.7 247 85.8
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 1.2e-114 417.2 301 70.4
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 2.6e-114 416.0 294 72.8
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 7.5e-114 414.5 304 68.4
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 6.0e-111 404.8 286 71.0
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 7.3e-109 397.9 266 75.2
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 2.6e-98 362.8 242 74.0
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 6.0e-95 351.7 306 58.2
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 1.6e-92 343.6 265 67.2
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 1.4e-91 340.5 305 60.7
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 1.8e-91 340.1 230 74.3
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 7.6e-90 334.7 220 75.9
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 2.2e-89 333.2 256 67.6
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 2.3e-86 323.2 291 57.0
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.7e-86 321.2 196 81.6
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 1.1e-85 320.9 305 54.4
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 1.6e-84 317.0 298 55.4
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 2.6e-82 309.7 306 57.5
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 4.5e-74 282.3 196 70.9
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 1.9e-72 276.9 297 50.5
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 2.0e-66 256.9 214 63.1
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 2.7e-63 246.5 310 43.9
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 1.8e-62 243.8 303 50.5
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.2e-57 226.9 143 81.1
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.0e-57 225.7 144 81.2
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 9.3e-56 221.5 144 79.2
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.0e-49 201.4 144 75.7
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 7.2e-48 195.3 334 38.9
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 2.2e-44 183.7 163 54.0
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.2e-42 177.9 115 76.5
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.7e-37 159.1 91 79.1
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 2.8e-36 156.8 265 41.9
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 9.1e-35 151.8 362 30.7
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 1.7e-33 147.5 314 33.4
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.8e-27 127.5 348 30.5
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 4.1e-27 126.3 80 77.5
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.2e-13 81.6 43 86.0


User provided reference genes

Program Settings