Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 1.1e-84 316.6 168 100.0
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 1.3e-67 260.0 194 75.8
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 7.2e-55 217.6 177 69.5
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 1.3e-48 196.8 177 63.8
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 1.8e-45 186.4 162 62.3
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 3.0e-45 185.7 157 64.3
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 6.7e-45 184.5 177 59.3
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 6.7e-45 184.5 157 64.3
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 1.5e-44 183.3 158 64.6
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 4.4e-44 181.8 178 59.6
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.3e-43 180.3 177 58.8
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.3e-43 180.3 177 58.8
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 2.2e-43 179.5 178 57.3
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 3.7e-43 178.7 198 54.5
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 3.7e-43 178.7 172 58.1
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 4.8e-43 178.3 154 64.3
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 8.2e-43 177.6 177 56.5
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 8.2e-43 177.6 153 62.1
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 8.2e-43 177.6 153 62.1
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 1.4e-42 176.8 153 61.4
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 1.4e-42 176.8 177 55.9
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 1.8e-42 176.4 164 58.5
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 2.4e-42 176.0 177 56.5
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 4.1e-42 175.3 186 56.5
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 4.1e-42 175.3 178 57.9
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 5.3e-42 174.9 153 61.4
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 1.2e-41 173.7 179 57.5
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 1.2e-41 173.7 153 60.8
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 1.6e-41 173.3 182 55.5
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 1.6e-41 173.3 157 59.2
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 3.5e-41 172.2 154 59.7
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 4.5e-41 171.8 181 53.0
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 4.5e-41 171.8 175 56.0
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 1.0e-40 170.6 177 53.7
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 1.7e-40 169.9 158 58.9
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 1.7e-40 169.9 155 59.4
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 3.8e-40 168.7 181 51.9
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 5.0e-40 168.3 181 53.0
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 8.5e-40 167.5 153 60.1
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 8.5e-40 167.5 177 53.7
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 1.1e-39 167.2 154 59.7
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 1.5e-39 166.8 154 57.8
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.5e-39 166.8 177 53.7
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 1.9e-39 166.4 153 60.1
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 2.5e-39 166.0 177 52.5
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 2.5e-39 166.0 177 52.5
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 2.5e-39 166.0 158 58.9
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 3.2e-39 165.6 169 55.0
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 5.5e-39 164.9 154 57.8
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 5.5e-39 164.9 154 57.8
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 7.2e-39 164.5 154 59.1
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 1.2e-38 163.7 181 51.4
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 1.2e-38 163.7 178 54.5
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 1.6e-38 163.3 178 52.8
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 1.6e-38 163.3 181 50.8
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 1.6e-38 163.3 178 53.4
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 3.6e-38 162.2 160 55.0
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 6.1e-38 161.4 160 54.4
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 8.0e-38 161.0 152 59.2
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 2.3e-37 159.5 160 54.4
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 3.0e-37 159.1 152 55.9
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 5.2e-37 158.3 177 52.5
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 1.5e-36 156.8 171 50.9
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 2.0e-36 156.4 153 54.2
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 2.6e-36 156.0 160 53.1
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 2.6e-36 156.0 180 50.0
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 1.1e-34 150.6 145 57.2
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 3.1e-34 149.1 145 56.6
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 7.0e-34 147.9 174 48.3
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 2.7e-33 146.0 182 47.8
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 4.5e-33 145.2 160 50.0
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 1.3e-32 143.7 143 60.1
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 1.3e-32 143.7 149 53.7
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 2.2e-32 142.9 145 54.5
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 2.9e-32 142.5 141 58.9
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 2.9e-32 142.5 94 78.7
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 5.0e-32 141.7 145 53.8
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 5.0e-32 141.7 153 51.0
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 5.0e-32 141.7 167 50.3
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 7.2e-31 137.9 191 45.0
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 2.1e-30 136.3 156 50.0
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 4.7e-30 135.2 140 57.1
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 2.3e-29 132.9 94 69.1
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 1.5e-28 130.2 95 67.4
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 5.7e-28 128.3 95 67.4
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 2.2e-27 126.3 252 35.7
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 1.2e-25 120.6 111 62.2
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 1.6e-25 120.2 141 52.5
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 2.7e-25 119.4 117 57.3
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 3.8e-24 115.5 95 62.1
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 5.0e-24 115.2 84 64.3
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.1e-23 114.0 119 52.9
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 1.9e-23 113.2 128 49.2
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 4.2e-23 112.1 148 41.9
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 2.1e-22 109.8 105 55.2
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 2.1e-22 109.8 118 56.8
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 2.7e-22 109.4 175 37.7
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 3.6e-22 109.0 105 55.2
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 8.0e-22 107.8 75 73.3
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 8.0e-22 107.8 148 39.9
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 8.0e-22 107.8 143 39.9
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 2.3e-21 106.3 148 45.3
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 4.0e-21 105.5 104 58.7
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 1.2e-20 104.0 132 43.9
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 4.4e-20 102.1 145 42.8
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 7.5e-20 101.3 158 41.1
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 6.3e-19 98.2 75 64.0
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 2.7e-17 92.8 188 34.0
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 2.9e-16 89.4 96 52.1
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 3.6e-14 82.4 149 37.6
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 1.5e-12 77.0 75 56.0
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 1.4e-10 70.5 125 36.0
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 9.2e-10 67.8 47 70.2
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 7.8e-09 64.7 56 60.7
AT5G10605 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 2.8e-06 56.2 33 78.8


User provided reference genes

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