Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08533 Corylus avellana HOM05D000732 ORTHO05D001037 1.3e-49 199.5 108 100.0
Haze_01450 Corylus avellana HOM05D000732 ORTHO05D001037 6.3e-12 74.3 42 88.1
Haze_08206 Corylus avellana HOM05D000732 ORTHO05D001037 3.1e-11 72.0 40 92.5
Lalb_Chr22g0352061 Lupinus albus HOM05D000732 ORTHO05D001037 2.0e-10 69.3 39 87.2
Cfa015199 Carpinus fangiana HOM05D000732 ORTHO05D001037 5.9e-10 67.8 37 91.9
Cfa019531 Carpinus fangiana HOM05D000732 ORTHO05D001037 5.9e-10 67.8 37 91.9
CiPaw.01G095800 Carya illinoinensis HOM05D000732 ORTHO05D001037 5.9e-10 67.8 37 91.9
Manes.11G125500 Manihot esculenta HOM05D000732 ORTHO05D001037 5.9e-10 67.8 37 91.9
QL10p051216 Quercus lobata HOM05D000732 ORTHO05D001037 5.9e-10 67.8 37 91.9
Atru.chr4.1267 Acer truncatum HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
AT1G08760 Arabidopsis thaliana HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 86.5
arahy.Tifrunner.gnm1.ann1.3BRQ4W Arachis hypogaea HOM05D000732 ORTHO05D001037 7.7e-10 67.4 49 69.4
arahy.Tifrunner.gnm1.ann1.89WMF4 Arachis hypogaea HOM05D000732 ORTHO05D001037 7.7e-10 67.4 49 69.4
arahy.Tifrunner.gnm1.ann1.F7AVJ6 Arachis hypogaea HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
BcaC07g41927 Brassica carinata HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 86.5
BraA06t23776Z Brassica rapa HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 86.5
CANSAT78G1705 Cannabis sativa HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
Ciclev10018994m.g Citrus clementina HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
Duzib151G0684 Durio zibethinus HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
FvH4_1g23460 Fragaria vesca HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
FAN19G1687 Fragaria x ananassa HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
FAN23G1643 Fragaria x ananassa HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
FAN26G2746 Fragaria x ananassa HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
FAN28G0453 Fragaria x ananassa HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
Gohir.A10G140000 Gossypium hirsutum HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
Gohir.D02G011900 Gossypium hirsutum HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
Gohir.D10G126800 Gossypium hirsutum HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
Gorai.005G015300 Gossypium raimondii HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
Gorai.011G139700 Gossypium raimondii HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
Lsat_1_v5_gn_5_71201 Lactuca sativa HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
MD04G1045400 Malus domestica HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
MD13G1256500 Malus domestica HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
Prupe.1G198600 Prunus persica HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
PGR083G2190 Punica granatum HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
RcHm_v2.0_Chr2g0118831 Rosa chinensis HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
Sabra07G0106800 Salix brachista HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
Sabra07G0118700 Salix brachista HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
Sp1g07400 Schrenkiella parvula HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 86.5
THA.LOC104805816 Tarenaya hassleriana HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
Thecc.04G174200 Theobroma cacao HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
TWI15G0939 Tripterygium wilfordii HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
unitig_578.g16256 Utricularia gibba HOM05D000732 ORTHO05D001037 7.7e-10 67.4 37 89.2
AL1G19190 Arabidopsis lyrata HOM05D000732 ORTHO05D001037 1.0e-09 67.0 37 86.5
BcaNung06266 Brassica carinata HOM05D000732 ORTHO05D001037 1.0e-09 67.0 37 86.5
BolC5t29442H Brassica oleracea HOM05D000732 ORTHO05D001037 1.0e-09 67.0 37 86.5
BraA09t41920Z Brassica rapa HOM05D000732 ORTHO05D001037 1.0e-09 67.0 37 86.5
Carub.0001s0810 Capsella rubella HOM05D000732 ORTHO05D001037 1.0e-09 67.0 37 86.5
COL.COLO4_08221 Corchorus olitorius HOM05D000732 ORTHO05D001037 1.0e-09 67.0 37 86.5
Duzib268G0812 Durio zibethinus HOM05D000732 ORTHO05D001037 1.0e-09 67.0 37 86.5
Thhalv10006887m.g Eutrema salsugineum HOM05D000732 ORTHO05D001037 1.0e-09 67.0 37 86.5
unitig_18.g30054 Utricularia gibba HOM05D000732 ORTHO05D001037 1.0e-09 67.0 37 86.5
BcaB03g16369 Brassica carinata HOM05D000732 ORTHO05D001037 1.3e-09 66.6 37 86.5
Glyma.11G126000 Glycine max HOM05D000732 ORTHO05D001037 1.3e-09 66.6 37 86.5
Glyma.12G050600 Glycine max HOM05D000732 ORTHO05D001037 1.3e-09 66.6 37 86.5
Lj3g0012404 Lotus japonicus HOM05D000732 ORTHO05D001037 1.3e-09 66.6 37 86.5
CARHR008680 Cardamine hirsuta HOM05D000732 ORTHO05D001037 1.7e-09 66.2 37 83.8
Cpa.g.sc9.321 Carica papaya HOM05D000732 ORTHO05D001037 1.7e-09 66.2 37 86.5
ClCG06G000970 Citrullus lanatus HOM05D000732 ORTHO05D001037 1.7e-09 66.2 37 86.5
MELO3C022442.2 Cucumis melo HOM05D000732 ORTHO05D001037 1.7e-09 66.2 37 86.5
CsaV3_6G006820 Cucumis sativus L. HOM05D000732 ORTHO05D001037 1.7e-09 66.2 37 86.5
Gohir.A02G011100 Gossypium hirsutum HOM05D000732 ORTHO05D001037 1.7e-09 66.2 37 86.5
Sed0000679 Sechium edule HOM05D000732 ORTHO05D001037 1.7e-09 66.2 37 86.5
Aa31LG2G18700 Aethionema arabicum HOM05D000732 ORTHO05D001037 2.2e-09 65.9 37 86.5
BolC8t52511H Brassica oleracea HOM05D000732 ORTHO05D001037 2.2e-09 65.9 37 83.8
Ca_01248_v3 Cicer arietinum L. HOM05D000732 ORTHO05D001037 2.2e-09 65.9 37 86.5
Eucgr.H00341 Eucalyptus grandis HOM05D000732 ORTHO05D001037 2.2e-09 65.9 37 86.5
Glyma.15G028800 Glycine max HOM05D000732 ORTHO05D001037 2.2e-09 65.9 37 86.5
Lj3g0019803 Lotus japonicus HOM05D000732 ORTHO05D001037 2.2e-09 65.9 37 86.5
Manes.04G047100 Manihot esculenta HOM05D000732 ORTHO05D001037 2.2e-09 65.9 37 86.5
Medtr2g099095 Medicago truncatula HOM05D000732 ORTHO05D001037 2.2e-09 65.9 37 86.5
Psat5g290360 Pisum sativum HOM05D000732 ORTHO05D001037 2.2e-09 65.9 37 86.5
Sabra17G0000900 Salix brachista HOM05D000732 ORTHO05D001037 2.2e-09 65.9 37 86.5
Sabra17G0016000 Salix brachista HOM05D000732 ORTHO05D001037 2.2e-09 65.9 37 86.5
THA.LOC104821115 Tarenaya hassleriana HOM05D000732 ORTHO05D001037 2.2e-09 65.9 37 86.5
TPR.G6594 Trifolium pratense HOM05D000732 ORTHO05D001037 2.2e-09 65.9 37 86.5
TWI38G1157 Tripterygium wilfordii HOM05D000732 ORTHO05D001037 2.2e-09 65.9 37 86.5
VMungo1080G0037 Vigna mungo HOM05D000732 ORTHO05D001037 2.2e-09 65.9 37 86.5
Ca_20803_v3 Cicer arietinum L. HOM05D000732 ORTHO05D001037 2.9e-09 65.5 37 86.5
MBI07_g18521_MAGBIO Magnolia biondii HOM05D000732 ORTHO05D001037 2.9e-09 65.5 37 86.5
Medtr4g068050 Medicago truncatula HOM05D000732 ORTHO05D001037 2.9e-09 65.5 37 86.5
Oeu034443.3 Olea europaea HOM05D000732 ORTHO05D001037 2.9e-09 65.5 37 86.5
Psat7g209400 Pisum sativum HOM05D000732 ORTHO05D001037 2.9e-09 65.5 37 86.5
Potri.007G131600 Populus trichocarpa HOM05D000732 ORTHO05D001037 2.9e-09 65.5 37 86.5
Potri.017G026200 Populus trichocarpa HOM05D000732 ORTHO05D001037 2.9e-09 65.5 37 86.5
TPR.G34245 Trifolium pratense HOM05D000732 ORTHO05D001037 2.9e-09 65.5 37 86.5
arahy.Tifrunner.gnm1.ann1.P16UST Arachis hypogaea HOM05D000732 ORTHO05D001037 3.8e-09 65.1 50 66.0
MSTRG.22011 Avicennia marina HOM05D000732 ORTHO05D001037 3.8e-09 65.1 37 86.5
CAN.G65.154 Capsicum annuum HOM05D000732 ORTHO05D001037 3.8e-09 65.1 37 86.5
Nn7g37579 Nelumbo nucifera HOM05D000732 ORTHO05D001037 3.8e-09 65.1 37 86.5
Nitab4.5_0001586g0200 Nicotiana tabacum HOM05D000732 ORTHO05D001037 3.8e-09 65.1 37 86.5
Nitab4.5_0002722g0020 Nicotiana tabacum HOM05D000732 ORTHO05D001037 3.8e-09 65.1 37 86.5
SalBow6G2995 Salvia bowleyana HOM05D000732 ORTHO05D001037 3.8e-09 65.1 37 86.5
Sc13g0006710 Simmondsia chinensis HOM05D000732 ORTHO05D001037 3.8e-09 65.1 37 86.5
Solyc06g073110.3 Solanum lycopersicum HOM05D000732 ORTHO05D001037 3.8e-09 65.1 37 86.5
Sopen06g029460 Solanum pennellii HOM05D000732 ORTHO05D001037 3.8e-09 65.1 37 86.5
TAR362G0289 Trochodendron aralioides HOM05D000732 ORTHO05D001037 3.8e-09 65.1 37 86.5
Ah.13g073720 Amaranthus hybridus HOM05D000732 ORTHO05D001037 5.0e-09 64.7 37 83.8
CSS0021096 Camellia sinensis var. sinensis HOM05D000732 ORTHO05D001037 5.0e-09 64.7 37 83.8
CSS0031933 Camellia sinensis var. sinensis HOM05D000732 ORTHO05D001037 5.0e-09 64.7 37 83.8
AUR62002353 Chenopodium quinoa HOM05D000732 ORTHO05D001037 5.0e-09 64.7 37 83.8
AUR62023831 Chenopodium quinoa HOM05D000732 ORTHO05D001037 5.0e-09 64.7 37 83.8
Phvul.011G052900 Phaseolus vulgaris HOM05D000732 ORTHO05D001037 5.0e-09 64.7 37 83.8
Hund12403 Selenicereus undatus HOM05D000732 ORTHO05D001037 5.0e-09 64.7 37 83.8
VMungo1127G0028 Vigna mungo HOM05D000732 ORTHO05D001037 5.0e-09 64.7 37 83.8
MSTRG.24573 Avicennia marina HOM05D000732 ORTHO05D001037 6.5e-09 64.3 37 86.5
EL10Ac3g06015 Beta vulgaris HOM05D000732 ORTHO05D001037 6.5e-09 64.3 37 81.1
CiPaw.02G051800 Carya illinoinensis HOM05D000732 ORTHO05D001037 6.5e-09 64.3 37 86.5
Glyma.13G345500 Glycine max HOM05D000732 ORTHO05D001037 6.5e-09 64.3 37 83.8
Os09g0516700 Oryza sativa ssp. japonica HOM05D000732 ORTHO05D001037 6.5e-09 64.3 37 83.8
Zm00001eb318630 Zea mays HOM05D000732 ORTHO05D001037 6.5e-09 64.3 37 83.8
HanXRQChr12g0379701 Helianthus annuus HOM05D000732 ORTHO05D001037 8.5e-09 63.9 37 86.5
HanXRQChr15g0469171 Helianthus annuus HOM05D000732 ORTHO05D001037 8.5e-09 63.9 37 86.5
Os08g0541500 Oryza sativa ssp. japonica HOM05D000732 ORTHO05D001037 8.5e-09 63.9 37 83.8
Zm00001eb037300 Zea mays HOM05D000732 ORTHO05D001037 8.5e-09 63.9 37 83.8
ATR0743G126 Amborella trichopoda HOM05D000732 ORTHO05D001037 1.1e-08 63.5 37 81.1
ECA233G5137 Erigeron canadensis HOM05D000732 ORTHO05D001037 1.1e-08 63.5 37 83.8
Migut.N03096 Erythranthe guttata HOM05D000732 ORTHO05D001037 1.1e-08 63.5 37 83.8
HanXRQChr12g0380281 Helianthus annuus HOM05D000732 ORTHO05D001037 1.1e-08 63.5 37 83.8
Lj6C108T8 Lonicera japonica HOM05D000732 ORTHO05D001037 1.1e-08 63.5 37 86.5
PSO675G8077 Papaver somniferum HOM05D000732 ORTHO05D001037 1.1e-08 63.5 37 83.8
Lsat_1_v5_gn_3_109761 Lactuca sativa HOM05D000732 ORTHO05D001037 1.5e-08 63.2 37 81.1
Lalb_Chr03g0026011 Lupinus albus HOM05D000732 ORTHO05D001037 1.5e-08 63.2 37 81.1
Lalb_Chr14g0372531 Lupinus albus HOM05D000732 ORTHO05D001037 1.5e-08 63.2 39 76.9
BcaB03g13315 Brassica carinata HOM05D000732 ORTHO05D001037 1.9e-08 62.8 37 83.8
Hma1.2p1_0324F.1_g125630 Hydrangea macrophylla HOM05D000732 ORTHO05D001037 1.9e-08 62.8 37 83.8
Peaxi162Scf00180g00312 Petunia axillaris HOM05D000732 ORTHO05D001037 1.9e-08 62.8 37 83.8
GSVIVG01010850001 Vitis vinifera HOM05D000732 ORTHO05D001037 1.9e-08 62.8 37 83.8
Aqoxy2G04130 Aquilegia oxysepala HOM05D000732 ORTHO05D001037 2.5e-08 62.4 37 81.1
Dinv05084 Davidia involucrata HOM05D000732 ORTHO05D001037 2.5e-08 62.4 37 81.1
Lj3A42T21 Lonicera japonica HOM05D000732 ORTHO05D001037 2.5e-08 62.4 37 81.1
Lj3C50T6 Lonicera japonica HOM05D000732 ORTHO05D001037 2.5e-08 62.4 37 81.1
CDE02G0077 Ceratophyllum demersum HOM05D000732 ORTHO05D001037 3.2e-08 62.0 37 81.1
CDE09G0408 Ceratophyllum demersum HOM05D000732 ORTHO05D001037 3.2e-08 62.0 37 81.1
HanXRQChr13g0419851 Helianthus annuus HOM05D000732 ORTHO05D001037 3.2e-08 62.0 37 81.1
PSO017G4930 Papaver somniferum HOM05D000732 ORTHO05D001037 3.2e-08 62.0 37 81.1
Actinidia27087 Actinidia chinensis HOM05D000732 ORTHO05D001037 4.2e-08 61.6 37 81.1
Actinidia34579 Actinidia chinensis HOM05D000732 ORTHO05D001037 4.2e-08 61.6 37 81.1
Dinv44159 Davidia involucrata HOM05D000732 ORTHO05D001037 4.2e-08 61.6 37 81.1
Hund03179 Selenicereus undatus HOM05D000732 ORTHO05D001037 4.2e-08 61.6 37 75.7
Lalb_Chr24g0396741 Lupinus albus HOM05D000732 ORTHO05D001037 7.2e-08 60.8 37 78.4
SGA_v2.0_scaffold322G48601 Striga asiatica HOM05D000732 ORTHO05D001037 7.2e-08 60.8 37 78.4
TAR626G1308 Trochodendron aralioides HOM05D000732 ORTHO05D001037 7.2e-08 60.8 37 78.4
HPP92_005580 Vanilla planifolia HOM05D000732 ORTHO05D001037 7.2e-08 60.8 56 57.1
Sed0021620 Sechium edule HOM05D000732 ORTHO05D001037 9.4e-08 60.5 37 81.1
DCAR_028427 Daucus carota HOM05D000732 ORTHO05D001037 1.2e-07 60.1 37 78.4
Rhsim09G0021700 Rhododendron simsii HOM05D000732 ORTHO05D001037 1.2e-07 60.1 37 75.7
RhsimUnG0138000 Rhododendron simsii HOM05D000732 ORTHO05D001037 1.2e-07 60.1 37 75.7
Zm00001eb102800 Zea mays HOM05D000732 ORTHO05D001037 1.2e-07 60.1 37 78.4
BcaB03g15244 Brassica carinata HOM05D000424 ORTHO05D000355 1.6e-07 59.7 51 60.8
Oeu020492.1 Olea europaea HOM05D000732 ORTHO05D001037 2.1e-07 59.3 37 73.0
vmacro00615 Vaccinium macrocarpon HOM05D000732 ORTHO05D001037 2.1e-07 59.3 37 75.7
vmacro00678 Vaccinium macrocarpon HOM05D000732 ORTHO05D001037 2.1e-07 59.3 37 75.7
ECA240G3135 Erigeron canadensis HOM05D000732 ORTHO05D001037 2.7e-07 58.9 37 78.4
Peaxi162Scf00504g00098 Petunia axillaris HOM05D000732 ORTHO05D001037 2.7e-07 58.9 37 78.4
SEGI_12761 Sequoiadendron giganteum HOM05D000732 ORTHO05D001037 6.1e-07 57.8 37 73.0
HPP92_005595 Vanilla planifolia HOM05D000732 ORTHO05D001037 6.1e-07 57.8 37 73.0
Mapoly0073s0066 Marchantia polymorpha HOM05D000732 ORTHO05D001037 8.0e-07 57.4 37 70.3
ATR1127G067 Amborella trichopoda HOM05D000732 ORTHO05D007766 1.4e-06 56.6 37 75.7
Pp3c7_26930 Physcomitrium patens HOM05D000732 ORTHO05D001037 1.4e-06 56.6 37 70.3
AagrBONN_evm.TU.Sc2ySwM_362.1564 Anthoceros agrestis HOM05D000732 ORTHO05D001037 1.8e-06 56.2 36 72.2
arahy.Tifrunner.gnm1.ann1.PIE3V7 Arachis hypogaea HOM05D000732 ORTHO05D001037 1.8e-06 56.2 37 73.0
Pp3c1_38260 Physcomitrium patens HOM05D000732 ORTHO05D001037 2.3e-06 55.8 37 67.6
SEGI_19662 Sequoiadendron giganteum HOM05D000732 ORTHO05D001037 2.3e-06 55.8 37 70.3
Pp3c1_210 Physcomitrium patens HOM05D000732 ORTHO05D001037 3.0e-06 55.5 37 70.3
Pp3c2_3720 Physcomitrium patens HOM05D000732 ORTHO05D001037 3.0e-06 55.5 37 64.9
SEGI_07181 Sequoiadendron giganteum HOM05D000732 ORTHO05D007225 3.0e-06 55.5 39 69.2
Pp3c2_28590 Physcomitrium patens HOM05D000732 ORTHO05D001037 4.0e-06 55.1 37 64.9
arahy.Tifrunner.gnm1.ann1.93QG5G Arachis hypogaea HOM05D000732 ORTHO05D001037 5.2e-06 54.7 37 70.3
BcaB07g34061 Brassica carinata HOM05D000736 ORTHO05D016041 5.2e-06 54.7 44 70.5
BcaC02g10480 Brassica carinata HOM05D000732 ORTHO05D001037 5.2e-06 54.7 37 75.7
Lj1g0025180 Lotus japonicus HOM05D000732 ORTHO05D001037 5.2e-06 54.7 43 62.8
Aqoxy4G03286 Aquilegia oxysepala HOM05D000732 ORTHO05D007766 6.7e-06 54.3 37 67.6
Medtr0050s0010 Medicago truncatula HOM05D000732 ORTHO05D001037 8.8e-06 53.9 37 70.3
Psat1g109640 Pisum sativum HOM05D000732 ORTHO05D001037 8.8e-06 53.9 37 70.3
TPR.G27714 Trifolium pratense HOM05D000732 ORTHO05D001037 8.8e-06 53.9 39 64.1


User provided reference genes

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