Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08528 Corylus avellana HOM05D007146 ORTHO05D008971 2.1e-85 318.9 154 100.0
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 8.1e-45 184.1 131 68.7
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 4.0e-28 128.6 136 52.9
Ciclev10022203m.g Citrus clementina HOM05D007146 ORTHO05D008971 1.3e-26 123.6 137 50.4
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 2.9e-26 122.5 135 48.9
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 2.9e-26 122.5 135 48.9
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 6.4e-26 121.3 147 45.6
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 1.9e-25 119.8 136 48.5
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 2.4e-25 119.4 136 48.5
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 1.2e-24 117.1 135 48.9
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 2.7e-24 115.9 132 47.7
Thecc.07G156300 Theobroma cacao HOM05D007146 ORTHO05D008971 3.5e-24 115.5 135 48.1
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 6.0e-24 114.8 136 46.3
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 6.0e-24 114.8 133 46.6
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 1.7e-23 113.2 136 44.9
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 5.1e-23 111.7 136 47.1
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 3.3e-22 109.0 144 45.8
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 5.6e-22 108.2 144 47.2
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 7.3e-22 107.8 135 46.7
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 9.6e-22 107.5 136 48.5
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 4.8e-21 105.1 135 46.7
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 1.1e-20 104.0 134 47.0
Ca_03695_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 1.8e-20 103.2 133 44.4
Ca_03700_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 1.8e-20 103.2 133 44.4
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 3.1e-20 102.4 158 39.2
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 4.0e-20 102.1 134 43.3
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 6.9e-20 101.3 133 45.9
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 6.9e-20 101.3 158 38.6
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 2.0e-19 99.8 158 38.0
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 2.6e-19 99.4 131 44.3
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 2.6e-19 99.4 158 40.5
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 3.4e-19 99.0 133 43.6
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 3.4e-19 99.0 139 41.0
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 5.8e-19 98.2 132 42.4
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 9.9e-19 97.4 133 44.4
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 1.3e-18 97.1 132 43.9
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 2.2e-18 96.3 144 43.1
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 1.4e-17 93.6 135 42.2
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 1.9e-17 93.2 135 45.2
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 2.4e-17 92.8 131 41.2
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 2.4e-17 92.8 139 41.0
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 5.4e-17 91.7 132 41.7
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 9.3e-17 90.9 135 39.3
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 9.3e-17 90.9 147 42.9
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 1.2e-16 90.5 132 42.4
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 2.7e-16 89.4 133 41.4
MBI02_g40068_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 7.9e-16 87.8 149 39.6
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 2.3e-15 86.3 149 38.9
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 8.7e-15 84.3 133 39.1
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 1.5e-14 83.6 133 44.4
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 1.5e-14 83.6 131 42.7
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 3.3e-14 82.4 148 37.2
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 4.3e-14 82.0 145 38.6
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 2.4e-12 76.3 132 35.6
Ah.06g187020 Amaranthus hybridus HOM05D007146 ORTHO05D008971 5.3e-12 75.1 135 34.1
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 9.0e-12 74.3 133 34.6
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 4.5e-11 72.0 132 34.1
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 5.8e-11 71.6 132 35.6
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 9.9e-11 70.9 133 33.8
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 1.3e-10 70.5 132 33.3
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 6.4e-10 68.2 132 34.1
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 6.4e-10 68.2 132 34.8
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 1.1e-09 67.4 138 37.0
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 1.4e-09 67.0 132 34.8
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 1.4e-09 67.0 150 35.3
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 1.9e-09 66.6 136 32.4
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 2.4e-09 66.2 138 37.7
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 2.4e-09 66.2 131 35.1
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 3.2e-09 65.9 131 33.6
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 3.2e-09 65.9 64 48.4
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 4.6e-08 62.0 131 33.6
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 4.6e-08 62.0 131 32.1
RcHm_v2.0_Chr6g0273061 Rosa chinensis HOM05D007146 ORTHO05D008971 4.6e-08 62.0 50 54.0
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 4.6e-08 62.0 133 31.6
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 6.0e-08 61.6 132 31.1
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 6.0e-08 61.6 151 31.1
DCAR_002379 Daucus carota HOM05D007146 ORTHO05D008971 1.3e-07 60.5 132 31.8
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 1.8e-07 60.1 131 35.9
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 3.9e-07 58.9 131 31.3
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 6.7e-07 58.2 131 33.6
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 6.7e-07 58.2 131 33.6
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 8.7e-07 57.8 133 31.6
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 1.1e-06 57.4 131 33.6
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 1.1e-06 57.4 131 33.6
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 1.1e-06 57.4 131 32.1
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 1.5e-06 57.0 131 32.1
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 7.4e-06 54.7 131 28.2


User provided reference genes

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