Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08519 Corylus avellana HOM05D005788 ORTHO05D007111 2.1e-58 228.8 115 100.0
Haze_22512 Corylus avellana HOM05D005788 ORTHO05D007111 5.7e-27 124.4 123 63.4
Cfa013840 Carpinus fangiana HOM05D005788 ORTHO05D007111 1.8e-25 119.4 125 55.2
CiPaw.08G058400 Carya illinoinensis HOM05D005788 ORTHO05D007111 4.1e-17 91.7 115 48.7
QL02p033376 Quercus lobata HOM05D005788 ORTHO05D007111 1.9e-14 82.8 128 46.9
Sabra19G0093700 Salix brachista HOM05D005788 ORTHO05D007111 1.6e-13 79.7 115 41.7
CANSAT25G2274 Cannabis sativa HOM05D005788 ORTHO05D007111 2.7e-13 79.0 114 42.1
Dinv41719 Davidia involucrata HOM05D005788 ORTHO05D007111 2.7e-13 79.0 120 42.5
Actinidia23338 Actinidia chinensis HOM05D005788 ORTHO05D007111 6.1e-13 77.8 114 44.7
Duzib177G0992 Durio zibethinus HOM05D005788 ORTHO05D007111 1.8e-12 76.3 120 41.7
MD08G1220600 Malus domestica HOM05D005788 ORTHO05D007111 3.0e-12 75.5 117 41.9
MD15G1411300 Malus domestica HOM05D005788 ORTHO05D007111 3.9e-12 75.1 120 47.5
MD10G1093700 Malus domestica HOM05D005788 ORTHO05D007111 5.1e-12 74.7 120 47.5
Potri.019G082200 Populus trichocarpa HOM05D005788 ORTHO05D007111 6.7e-12 74.3 119 39.5
RcHm_v2.0_Chr7g0226481 Rosa chinensis HOM05D005788 ORTHO05D007111 6.7e-12 74.3 116 41.4
TAR381G0209 Trochodendron aralioides HOM05D005788 ORTHO05D007111 8.8e-12 73.9 114 42.1
Prupe.1G557500 Prunus persica HOM05D005788 ORTHO05D007111 1.1e-11 73.6 127 39.4
VMungo0720G1820 Vigna mungo HOM05D005788 ORTHO05D007111 2.0e-11 72.8 115 43.5
FvH4_5g31230 Fragaria vesca HOM05D005788 ORTHO05D007111 2.5e-11 72.4 124 41.9
FAN18G3373 Fragaria x ananassa HOM05D005788 ORTHO05D007111 2.5e-11 72.4 124 41.9
Gorai.013G139900 Gossypium raimondii HOM05D005788 ORTHO05D007111 2.5e-11 72.4 131 40.5
Potri.013G111200 Populus trichocarpa HOM05D005788 ORTHO05D007111 3.3e-11 72.0 118 36.4
Cpa.g.sc66.28 Carica papaya HOM05D005788 ORTHO05D007111 7.4e-11 70.9 117 42.7
Nitab4.5_0001082g0120 Nicotiana tabacum HOM05D005788 ORTHO05D007111 7.4e-11 70.9 115 40.9
Thecc.08G185000 Theobroma cacao HOM05D005788 ORTHO05D007111 7.4e-11 70.9 116 38.8
COL.COLO4_23644 Corchorus olitorius HOM05D005788 ORTHO05D007111 9.7e-11 70.5 116 39.7
Nn5g27655 Nelumbo nucifera HOM05D005788 ORTHO05D007111 9.7e-11 70.5 114 40.4
Nitab4.5_0000303g0240 Nicotiana tabacum HOM05D005788 ORTHO05D007111 1.3e-10 70.1 126 41.3
Gohir.A13G121000 Gossypium hirsutum HOM05D005788 ORTHO05D007111 1.7e-10 69.7 131 40.5
Gohir.D13G125100 Gossypium hirsutum HOM05D005788 ORTHO05D007111 2.2e-10 69.3 131 39.7
PGSC0003DMG400026071 Solanum tuberosum HOM05D005788 ORTHO05D007111 2.2e-10 69.3 120 41.7
CSS0022814 Camellia sinensis var. sinensis HOM05D005788 ORTHO05D007111 1.1e-09 67.0 121 38.0
Dinv15067 Davidia involucrata HOM05D005788 ORTHO05D007111 1.1e-09 67.0 124 37.1
FAN08G3056 Fragaria x ananassa HOM05D005788 ORTHO05D007111 1.1e-09 67.0 124 39.5
vmacro21836 Vaccinium macrocarpon HOM05D005788 ORTHO05D007111 1.4e-09 66.6 114 36.8
Sopen06g023730 Solanum pennellii HOM05D005788 ORTHO05D007111 1.8e-09 66.2 121 40.5
Glyma.20G174300 Glycine max HOM05D005788 ORTHO05D007111 2.4e-09 65.9 116 42.2
Eucgr.F02589 Eucalyptus grandis HOM05D005788 ORTHO05D007111 5.3e-09 64.7 120 40.0
Rhsim06G0094900 Rhododendron simsii HOM05D005788 ORTHO05D007111 5.3e-09 64.7 114 36.8
Solyc06g065240.3 Solanum lycopersicum HOM05D005788 ORTHO05D007111 5.3e-09 64.7 121 39.7
Ciclev10001278m.g Citrus clementina HOM05D005788 ORTHO05D007111 9.1e-09 63.9 141 39.7
FAN13G1254 Fragaria x ananassa HOM05D005788 ORTHO05D007111 9.1e-09 63.9 124 38.7
Glyma.10G217800 Glycine max HOM05D005788 ORTHO05D007111 9.1e-09 63.9 115 42.6
Cc00_g23910 Coffea canephora HOM05D005788 ORTHO05D007111 1.2e-08 63.5 121 38.0
PSO782G4240 Papaver somniferum HOM05D005788 ORTHO05D007111 1.2e-08 63.5 126 37.3
TPR.G15721 Trifolium pratense HOM05D005788 ORTHO05D007111 1.2e-08 63.5 117 35.0
Atru.chr13.1732 Acer truncatum HOM05D005788 ORTHO05D007111 3.4e-08 62.0 128 35.9
ClCG08G008690 Citrullus lanatus HOM05D005788 ORTHO05D007111 3.4e-08 62.0 125 39.2
MELO3C019942.2 Cucumis melo HOM05D005788 ORTHO05D007111 3.4e-08 62.0 125 39.2
Lj5g0012683 Lotus japonicus HOM05D005788 ORTHO05D007111 3.4e-08 62.0 115 37.4
PSO170G1049 Papaver somniferum HOM05D005788 ORTHO05D007111 4.5e-08 61.6 120 36.7
Hma1.2p1_0162F.1_g072170 Hydrangea macrophylla HOM05D005788 ORTHO05D007111 5.9e-08 61.2 117 39.3
HanXRQChr11g0325971 Helianthus annuus HOM05D005788 ORTHO05D007111 7.7e-08 60.8 126 36.5
Carub.0002s1877 Capsella rubella HOM05D005788 ORTHO05D007111 1.0e-07 60.5 118 35.6
Rhsim09G0039300 Rhododendron simsii HOM05D005788 ORTHO05D007111 1.7e-07 59.7 114 38.6
Sed0027152 Sechium edule HOM05D005788 ORTHO05D007111 1.7e-07 59.7 125 40.0
Sc01g0001840 Simmondsia chinensis HOM05D005788 ORTHO05D007111 2.9e-07 58.9 113 38.1
CsaV3_6G004710 Cucumis sativus L. HOM05D005788 ORTHO05D007111 3.8e-07 58.5 125 38.4
PGR042G3638 Punica granatum HOM05D005788 ORTHO05D007111 8.5e-07 57.4 125 32.8
Peaxi162Scf00268g00087 Petunia axillaris HOM05D005788 ORTHO05D007111 1.1e-06 57.0 116 37.9
Aa31LG4G8620 Aethionema arabicum HOM05D005788 ORTHO05D007111 3.2e-06 55.5 129 34.9
BcaB03g14921 Brassica carinata HOM05D005788 ORTHO05D007111 3.2e-06 55.5 114 35.1
Manes.02G192900 Manihot esculenta HOM05D005788 ORTHO05D007111 4.2e-06 55.1 125 32.8
CAN.G308.72 Capsicum annuum HOM05D005788 ORTHO05D007111 9.4e-06 53.9 133 33.8
Sp5g27060 Schrenkiella parvula HOM05D005788 ORTHO05D007111 9.4e-06 53.9 129 37.2


User provided reference genes

Program Settings