Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 1.3e-215 753.4 412 100.0
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 5.1e-188 661.8 409 90.5
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 5.1e-156 555.4 368 80.7
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 9.7e-147 524.6 416 68.0
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 1.5e-142 510.8 335 79.7
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 1.2e-141 507.7 417 66.2
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 1.2e-141 507.7 417 66.2
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 8.8e-140 501.5 423 70.2
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 2.0e-139 500.4 335 77.3
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 5.7e-139 498.8 329 76.9
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 9.7e-139 498.0 424 70.3
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 6.3e-138 495.4 335 74.9
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 6.3e-138 495.4 366 72.1
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 1.1e-137 494.6 334 76.3
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 3.1e-137 493.0 425 65.4
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 5.3e-137 492.3 336 77.4
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 9.1e-137 491.5 334 76.6
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 1.2e-136 491.1 365 73.2
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 1.2e-136 491.1 333 76.3
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 1.3e-135 487.6 367 69.5
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 3.8e-135 486.1 336 74.1
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 5.0e-135 485.7 331 75.2
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 1.1e-134 484.6 417 65.5
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 1.9e-134 483.8 362 69.6
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 2.5e-134 483.4 337 74.8
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 2.5e-134 483.4 337 75.7
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 2.5e-134 483.4 422 70.9
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 1.2e-133 481.1 333 74.8
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 2.7e-133 479.9 332 75.9
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 6.1e-133 478.8 336 74.4
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 1.0e-132 478.0 415 70.8
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 1.4e-132 477.6 334 75.1
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 6.8e-132 475.3 330 75.5
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 8.8e-132 474.9 336 73.8
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 1.2e-131 474.6 369 69.4
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 4.4e-131 472.6 329 74.2
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 4.4e-131 472.6 415 70.4
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 5.7e-131 472.2 371 69.8
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 9.8e-131 471.5 354 72.0
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 1.7e-130 470.7 419 69.7
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 2.8e-130 469.9 424 60.6
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 4.8e-130 469.2 366 67.8
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 5.4e-129 465.7 417 64.0
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 2.0e-128 463.8 441 67.1
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 2.7e-128 463.4 330 73.6
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 3.5e-128 463.0 332 73.2
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 3.5e-128 463.0 367 68.9
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 5.9e-128 462.2 433 65.1
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 1.0e-127 461.5 327 72.8
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 1.0e-127 461.5 325 73.5
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.3e-127 461.1 414 67.4
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 3.8e-127 459.5 332 73.8
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 1.5e-126 457.6 324 72.8
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 3.2e-126 456.4 330 73.3
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 5.5e-126 455.7 331 73.1
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 7.2e-126 455.3 331 72.2
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 1.6e-125 454.1 415 64.1
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 1.4e-124 451.1 332 69.9
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 2.3e-124 450.3 335 69.9
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 2.3e-124 450.3 338 69.8
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 2.3e-124 450.3 329 70.2
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 3.0e-124 449.9 389 64.3
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 2.0e-123 447.2 338 69.2
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 4.4e-123 446.0 327 71.6
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 5.7e-123 445.7 338 69.2
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 3.7e-122 443.0 329 71.1
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 6.3e-122 442.2 327 71.3
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 1.1e-121 441.4 333 67.9
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 1.1e-121 441.4 338 68.3
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 1.1e-121 441.4 368 65.2
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 1.1e-121 441.4 322 70.2
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 1.8e-121 440.7 336 68.5
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 1.8e-121 440.7 336 68.5
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 1.8e-121 440.7 336 67.9
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 2.4e-121 440.3 422 65.6
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 4.1e-121 439.5 336 68.5
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 3.5e-120 436.4 634 46.8
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 5.9e-120 435.6 342 67.5
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 3.8e-119 433.0 338 67.8
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 8.6e-119 431.8 369 63.7
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 2.1e-117 427.2 329 69.0
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 5.7e-115 419.1 352 65.6
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 1.1e-113 414.8 333 65.8
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 5.4e-113 412.5 341 66.3
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 9.2e-113 411.8 337 65.6
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 4.6e-112 409.5 327 65.4
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 4.6e-112 409.5 327 65.7
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 1.1e-102 378.3 276 72.1
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 2.6e-99 367.1 296 63.9
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 4.4e-99 366.3 284 68.3
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 1.6e-96 357.8 295 65.4
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 3.5e-96 356.7 302 61.6
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 8.6e-95 352.1 297 62.3
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 2.1e-93 347.4 241 73.9
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 2.1e-85 320.9 238 70.2
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 4.4e-83 313.2 243 68.3
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 4.2e-81 306.6 308 53.6
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 3.1e-68 263.8 205 67.3
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 1.3e-66 258.5 330 50.9
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 9.3e-65 252.3 184 74.5
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 4.6e-56 223.4 164 67.1
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 1.2e-48 198.7 172 61.0
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 5.3e-44 183.3 200 54.0
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 2.8e-37 161.0 283 38.5
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 6.7e-31 139.8 184 48.9
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 1.2e-27 129.0 69 84.1
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 1.0e-26 125.9 115 61.7
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 2.1e-24 118.2 93 69.9
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 3.6e-24 117.5 115 61.7
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 8.0e-24 116.3 90 67.8
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 2.3e-23 114.8 91 69.2
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 1.6e-19 102.1 146 63.7
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 7.7e-19 99.8 146 63.0
Nitab4.5_0000030g0480 Nicotiana tabacum HOM05D006577 ORTHO05D008428 1.5e-17 95.5 59 72.9
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 2.1e-16 91.7 146 61.6
AUR62042461 Chenopodium quinoa HOM05D006577 ORTHO05D008428 6.1e-16 90.1 53 77.4
FvH4_3g03932 Fragaria vesca HOM05D006577 ORTHO05D008428 1.4e-12 79.0 39 89.7
Lj3A8T28 Lonicera japonica HOM05D006577 ORTHO05D008428 3.1e-12 77.8 48 72.9
Lj3C28T3 Lonicera japonica HOM05D006577 ORTHO05D008428 3.1e-12 77.8 48 72.9
BcaB08g35318 Brassica carinata HOM05D006577 ORTHO05D008428 5.4e-12 77.0 55 69.1
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 1.2e-11 75.9 67 64.2
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 5.9e-11 73.6 112 35.7


User provided reference genes

Program Settings