Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08304 Corylus avellana HOM05D004955 ORTHO05D005965 4.2e-201 704.5 361 100.0
Haze_08303 Corylus avellana HOM05D004955 ORTHO05D005965 4.8e-165 584.7 407 78.4
Haze_07894 Corylus avellana HOM05D004955 ORTHO05D005965 3.9e-159 565.1 407 76.4
Haze_08299 Corylus avellana HOM05D004955 ORTHO05D005965 1.7e-149 533.1 325 87.1
QL12p007112 Quercus lobata HOM05D004955 ORTHO05D005965 3.6e-144 515.4 407 68.3
CiPaw.12G060300 Carya illinoinensis HOM05D004955 ORTHO05D005965 1.6e-136 490.0 408 65.9
Potri.001G146900 Populus trichocarpa HOM05D004955 ORTHO05D005965 9.8e-134 480.7 407 64.1
GSVIVG01011242001 Vitis vinifera HOM05D004955 ORTHO05D005965 2.4e-132 476.1 407 62.7
RcHm_v2.0_Chr7g0208321 Rosa chinensis HOM05D004955 ORTHO05D005965 2.0e-131 473.0 407 63.1
GSVIVG01013229001 Vitis vinifera HOM05D004955 ORTHO05D005965 2.0e-131 473.0 418 62.4
Prupe.5G046300 Prunus persica HOM05D004955 ORTHO05D005965 2.7e-131 472.6 407 62.9
FvH4_5g21180 Fragaria vesca HOM05D004955 ORTHO05D005965 1.3e-130 470.3 413 62.7
Sabra01G0115600 Salix brachista HOM05D004955 ORTHO05D005965 1.3e-130 470.3 407 63.6
Dinv28916 Davidia involucrata HOM05D004955 ORTHO05D005965 1.5e-129 466.8 407 63.6
Thecc.07G110200 Theobroma cacao HOM05D004955 ORTHO05D005965 1.5e-129 466.8 407 61.9
FAN08G3652 Fragaria x ananassa HOM05D004955 ORTHO05D005965 2.5e-129 466.1 415 62.2
MD06G1040100 Malus domestica HOM05D004955 ORTHO05D005965 3.2e-129 465.7 419 63.2
FAN18G2324 Fragaria x ananassa HOM05D004955 ORTHO05D005965 7.2e-129 464.5 432 60.0
COL.COLO4_17563 Corchorus olitorius HOM05D004955 ORTHO05D005965 9.4e-129 464.2 407 60.9
Gohir.D01G034800 Gossypium hirsutum HOM05D004955 ORTHO05D005965 2.1e-128 463.0 407 61.7
Gorai.002G043000 Gossypium raimondii HOM05D004955 ORTHO05D005965 2.1e-128 463.0 407 61.7
FAN04G2254 Fragaria x ananassa HOM05D004955 ORTHO05D005965 3.6e-128 462.2 433 60.3
Gohir.A01G044000 Gossypium hirsutum HOM05D004955 ORTHO05D005965 4.0e-127 458.8 407 60.7
Atru.BG.31.p Acer truncatum HOM05D004955 ORTHO05D005965 8.8e-127 457.6 407 60.9
Duzib213G0438 Durio zibethinus HOM05D004955 ORTHO05D005965 2.0e-126 456.4 407 60.7
FAN13G2236 Fragaria x ananassa HOM05D004955 ORTHO05D005965 5.7e-126 454.9 434 59.7
Cpa.g.sc39.114 Carica papaya HOM05D004955 ORTHO05D005965 1.3e-125 453.8 413 59.8
Eucgr.D02153 Eucalyptus grandis HOM05D004955 ORTHO05D005965 2.2e-125 453.0 404 62.1
TAR375G0042 Trochodendron aralioides HOM05D004955 ORTHO05D005965 2.8e-125 452.6 407 60.7
CSS0030337 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 1.8e-124 449.9 407 60.4
TWI81G0724 Tripterygium wilfordii HOM05D004955 ORTHO05D005965 4.1e-124 448.7 417 61.4
CSS0027312 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 1.2e-123 447.2 407 60.2
VMungo1215G2917 Vigna mungo HOM05D004955 ORTHO05D005965 2.0e-123 446.4 415 60.7
MBI04_g44837_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 4.5e-123 445.3 408 60.3
Lalb_Chr16g0379231 Lupinus albus HOM05D004955 ORTHO05D005965 5.9e-123 444.9 414 60.9
arahy.Tifrunner.gnm1.ann1.JVPY2N Arachis hypogaea HOM05D004955 ORTHO05D005965 2.3e-122 443.0 436 58.9
arahy.Tifrunner.gnm1.ann1.U6D9EY Arachis hypogaea HOM05D004955 ORTHO05D005965 2.3e-122 443.0 436 58.9
CANSAT80G1132 Cannabis sativa HOM05D004955 ORTHO05D005965 2.3e-122 443.0 407 60.4
Ca_24631_v3 Cicer arietinum L. HOM05D004955 ORTHO05D005965 2.5e-121 439.5 415 60.2
Ciclev10031124m.g Citrus clementina HOM05D004955 ORTHO05D005965 2.5e-121 439.5 407 59.7
Rhsim09G0128800 Rhododendron simsii HOM05D004955 ORTHO05D005965 2.5e-121 439.5 435 58.6
Manes.15G172800 Manihot esculenta HOM05D004955 ORTHO05D005965 1.6e-120 436.8 362 62.7
Psat2g174720 Pisum sativum HOM05D004955 ORTHO05D005965 4.7e-120 435.3 435 57.7
PGR031G1993 Punica granatum HOM05D004955 ORTHO05D005965 4.7e-120 435.3 407 58.7
Lj2g0012431 Lotus japonicus HOM05D004955 ORTHO05D005965 1.0e-119 434.1 432 57.9
Lj3A396G10 Lonicera japonica HOM05D004955 ORTHO05D005965 2.3e-119 433.0 424 58.3
Medtr5g013970 Medicago truncatula HOM05D004955 ORTHO05D005965 2.3e-119 433.0 436 58.7
Nitab4.5_0002055g0140 Nicotiana tabacum HOM05D004955 ORTHO05D005965 3.0e-119 432.6 407 59.2
Nitab4.5_0006693g0050 Nicotiana tabacum HOM05D004955 ORTHO05D005965 3.0e-119 432.6 407 59.0
PGSC0003DMG400024224 Solanum tuberosum HOM05D004955 ORTHO05D005965 1.2e-118 430.6 407 59.2
vmacro21668 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 1.2e-118 430.6 407 60.2
Nn1g00613 Nelumbo nucifera HOM05D004955 ORTHO05D005965 3.4e-118 429.1 407 59.2
Glyma.07G096600 Glycine max HOM05D004955 ORTHO05D005965 5.7e-118 428.3 410 58.0
vmacro00352 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 7.5e-118 427.9 389 62.7
AUR62007230 Chenopodium quinoa HOM05D004955 ORTHO05D005965 9.8e-118 427.6 394 59.4
Aa31LG9G15390 Aethionema arabicum HOM05D004955 ORTHO05D005965 1.7e-117 426.8 409 55.7
Sopen08g025850 Solanum pennellii HOM05D004955 ORTHO05D005965 1.7e-117 426.8 407 58.5
SHI01417 Sapria himalayana HOM05D004955 ORTHO05D005965 2.2e-117 426.4 396 58.1
CAN.G799.17 Capsicum annuum HOM05D004955 ORTHO05D005965 6.4e-117 424.9 407 58.2
CsaV3_1G038770 Cucumis sativus L. HOM05D004955 ORTHO05D005965 6.4e-117 424.9 409 59.2
EL10Ac5g12196 Beta vulgaris HOM05D004955 ORTHO05D005965 1.8e-116 423.3 432 55.6
AUR62018770 Chenopodium quinoa HOM05D004955 ORTHO05D005965 1.8e-116 423.3 394 58.6
Glyma.20G095000 Glycine max HOM05D004955 ORTHO05D005965 1.8e-116 423.3 408 57.6
Phvul.002G003600 Phaseolus vulgaris HOM05D004955 ORTHO05D005965 1.8e-116 423.3 415 59.0
Hund14430 Selenicereus undatus HOM05D004955 ORTHO05D005965 1.8e-116 423.3 421 56.8
Solyc08g077270.4 Solanum lycopersicum HOM05D004955 ORTHO05D005965 1.8e-116 423.3 407 57.7
CSS0006893 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 1.2e-115 420.6 408 57.8
MELO3C015301.2 Cucumis melo HOM05D004955 ORTHO05D005965 4.6e-115 418.7 409 57.9
DCAR_005602 Daucus carota HOM05D004955 ORTHO05D005965 4.6e-115 418.7 407 57.2
Oeu039341.2 Olea europaea HOM05D004955 ORTHO05D005965 1.3e-114 417.2 431 55.9
AUR62001104 Chenopodium quinoa HOM05D004955 ORTHO05D005965 1.7e-114 416.8 396 58.8
Sc07g0008830 Simmondsia chinensis HOM05D004955 ORTHO05D005965 1.7e-114 416.8 407 56.3
Peaxi162Scf00084g00922 Petunia axillaris HOM05D004955 ORTHO05D005965 3.9e-114 415.6 434 54.8
MD16G1269200 Malus domestica HOM05D004955 ORTHO05D005965 1.5e-113 413.7 415 58.3
AT5G18070 Arabidopsis thaliana HOM05D004955 ORTHO05D005965 2.5e-113 412.9 410 55.9
Sed0006321 Sechium edule HOM05D004955 ORTHO05D005965 4.3e-113 412.1 408 57.1
THA.LOC104814429 Tarenaya hassleriana HOM05D004955 ORTHO05D005965 7.3e-113 411.4 409 55.0
AL6G29260 Arabidopsis lyrata HOM05D004955 ORTHO05D005965 9.5e-113 411.0 411 55.7
Cc05_g03300 Coffea canephora HOM05D004955 ORTHO05D005965 1.2e-112 410.6 405 56.5
CARHR195050 Cardamine hirsuta HOM05D004955 ORTHO05D005965 4.7e-112 408.7 412 56.8
Aqoxy3G03106 Aquilegia oxysepala HOM05D004955 ORTHO05D005965 6.2e-112 408.3 409 56.5
Dinv25184 Davidia involucrata HOM05D004955 ORTHO05D005965 1.0e-111 407.5 396 58.6
ATR0829G014 Amborella trichopoda HOM05D004955 ORTHO05D005965 2.3e-111 406.4 406 55.2
PSO063G1154 Papaver somniferum HOM05D004955 ORTHO05D005965 3.1e-111 406.0 414 56.8
SalBow6G1446 Salvia bowleyana HOM05D004955 ORTHO05D005965 5.2e-111 405.2 407 55.8
Sp6g26230 Schrenkiella parvula HOM05D004955 ORTHO05D005965 5.2e-111 405.2 408 56.6
Carub.0006s1636 Capsella rubella HOM05D004955 ORTHO05D005965 1.2e-110 404.1 413 54.7
Thhalv10013080m.g Eutrema salsugineum HOM05D004955 ORTHO05D005965 1.2e-110 404.1 407 55.5
PSO017G5366 Papaver somniferum HOM05D004955 ORTHO05D005965 1.2e-110 404.1 414 56.5
HPP92_017500 Vanilla planifolia HOM05D004955 ORTHO05D005965 1.2e-110 404.1 408 54.4
C09p58920 Brassica napus HOM05D004955 ORTHO05D005965 2.0e-110 403.3 408 54.2
MSTRG.1970 Avicennia marina HOM05D004955 ORTHO05D005965 2.6e-110 402.9 407 56.0
PSO541G5086 Papaver somniferum HOM05D004955 ORTHO05D005965 2.6e-110 402.9 414 56.5
Migut.E00912 Erythranthe guttata HOM05D004955 ORTHO05D005965 7.5e-110 401.4 407 57.0
Migut.E00798 Erythranthe guttata HOM05D004955 ORTHO05D005965 2.2e-109 399.8 407 56.8
ClCG03G017340 Citrullus lanatus HOM05D004955 ORTHO05D005965 3.7e-109 399.1 376 58.5
BolC9t58736H Brassica oleracea HOM05D004955 ORTHO05D005965 6.4e-109 398.3 407 54.1
BcaC04g18728 Brassica carinata HOM05D004955 ORTHO05D005965 8.3e-109 397.9 408 53.7
ECA233G2813 Erigeron canadensis HOM05D004955 ORTHO05D005965 8.3e-109 397.9 403 55.8
A10p21440 Brassica napus HOM05D004955 ORTHO05D005965 3.2e-108 396.0 427 52.5
MBI04_g29834_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 3.2e-108 396.0 417 55.4
BraA10t44206Z Brassica rapa HOM05D004955 ORTHO05D005965 4.1e-108 395.6 407 53.6
SGA_v2.0_scaffold18G08384 Striga asiatica HOM05D004955 ORTHO05D005965 4.6e-107 392.1 408 54.7
HanXRQChr14g0455871 Helianthus annuus HOM05D004955 ORTHO05D005965 4.3e-105 385.6 405 55.8
Atru.chr6.1775 Acer truncatum HOM05D004955 ORTHO05D005965 1.3e-101 374.0 357 58.3
C03p10070 Brassica napus HOM05D004955 ORTHO05D005965 1.4e-100 370.5 406 52.0
BraA03t10187Z Brassica rapa HOM05D004955 ORTHO05D005965 1.4e-100 370.5 406 52.0
A03p08630 Brassica napus HOM05D004955 ORTHO05D005965 2.4e-100 369.8 406 52.2
Lsat_1_v5_gn_6_66461 Lactuca sativa HOM05D004955 ORTHO05D005965 3.2e-100 369.4 407 53.6
unitig_21.g20378 Utricularia gibba HOM05D004955 ORTHO05D005965 3.2e-100 369.4 396 54.8
BcaB01g05173 Brassica carinata HOM05D004955 ORTHO05D005965 9.2e-100 367.9 407 52.1
BolC3t13493H Brassica oleracea HOM05D004955 ORTHO05D005965 9.2e-100 367.9 407 52.1
Zm00001eb119880 Zea mays HOM05D004955 ORTHO05D005965 1.2e-99 367.5 409 50.6
Os07g0195400 Oryza sativa ssp. japonica HOM05D004955 ORTHO05D005965 3.9e-98 362.5 407 47.7
Actinidia25945 Actinidia chinensis HOM05D004955 ORTHO05D005965 5.6e-97 358.6 407 52.3
SEGI_00537 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 2.1e-96 356.7 407 51.4
BcaB08g36711 Brassica carinata HOM05D004955 ORTHO05D005965 7.1e-92 341.7 406 50.7
CDE08G0647 Ceratophyllum demersum HOM05D004955 ORTHO05D005965 1.3e-90 337.4 258 65.9
SGA_v2.0_scaffold157G37418 Striga asiatica HOM05D004955 ORTHO05D005965 3.9e-82 309.3 268 60.1
AagrBONN_evm.TU.Sc2ySwM_362.507 Anthoceros agrestis HOM05D004955 ORTHO05D005965 5.6e-81 305.4 435 45.5
Pp3c15_140 Physcomitrium patens HOM05D004955 ORTHO05D005965 7.9e-75 285.0 417 44.1
SMO174G0171 Selaginella moellendorffii HOM05D004955 ORTHO05D005965 5.3e-71 272.3 397 44.3
CBR_g36832 Chara braunii HOM05D004955 ORTHO05D005965 2.2e-69 266.9 441 40.1
Mapoly0074s0077 Marchantia polymorpha HOM05D004955 ORTHO05D005965 4.9e-69 265.8 427 42.9
Glyma.01G201400 Glycine max HOM05D004955 ORTHO05D005965 9.6e-65 251.5 293 51.5
MD09G1284100 Malus domestica HOM05D004955 ORTHO05D005965 2.5e-57 226.9 313 47.9
PRCOL_00000375 Prasinoderma coloniale HOM05D004955 ORTHO05D005965 1.8e-55 220.7 431 38.1
MCO08G085 Micromonas commoda HOM05D004955 ORTHO05D005965 2.3e-50 203.8 442 33.7
Cre08.g379700 Chlamydomonas reinhardtii HOM05D004955 ORTHO05D005965 1.1e-47 194.9 447 35.3
TPR.G6765 Trifolium pratense HOM05D004955 ORTHO05D005965 5.9e-46 189.1 310 45.5
Nn3g19414 Nelumbo nucifera HOM05D004955 ORTHO05D005965 1.3e-45 188.0 133 68.4
Glyma.16G093333 Glycine max HOM05D004955 ORTHO05D005965 5.0e-45 186.0 136 69.9
SEGI_27182 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 1.5e-28 131.3 245 37.6
Haze_08302 Corylus avellana HOM05D004955 ORTHO05D005965 3.2e-28 130.2 161 52.8
SEGI_19301 Sequoiadendron giganteum HOM05D005396 ORTHO05D006400 8.8e-26 122.1 189 41.8
Haze_26496 Corylus avellana HOM05D004955 ORTHO05D005965 3.3e-25 120.2 269 34.6
Glyma.16G093100 Glycine max HOM05D004955 ORTHO05D005965 4.8e-24 116.3 76 73.7
Haze_08300 Corylus avellana HOM05D004955 ORTHO05D005965 2.3e-13 80.9 43 88.4
Ah.04g153990 Amaranthus hybridus HOM05D004955 ORTHO05D005965 1.5e-12 78.2 73 49.3
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 4.2e-12 76.6 73 61.6
BcaB01g06395 Brassica carinata HOM05D004955 ORTHO05D005965 1.2e-09 68.6 78 52.6


User provided reference genes

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