Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 7.5e-104 380.6 197 100.0
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 5.0e-15 85.5 54 83.3
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 9.4e-14 81.3 75 64.0
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 9.4e-14 81.3 75 64.0
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 8.0e-13 78.2 43 88.4
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 8.0e-13 78.2 50 80.0
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 2.3e-12 76.6 42 90.5
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 2.3e-12 76.6 75 60.0
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.3e-12 76.6 51 76.5
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 2.3e-12 76.6 75 58.7
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 3.0e-12 76.3 43 88.4
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 3.9e-12 75.9 75 57.3
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 5.2e-12 75.5 75 56.0
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 5.2e-12 75.5 47 78.7
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 5.2e-12 75.5 42 88.1
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 6.7e-12 75.1 81 54.3
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 6.7e-12 75.1 81 54.3
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 6.7e-12 75.1 71 60.6
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 8.8e-12 74.7 75 61.3
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 8.8e-12 74.7 42 90.5
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 8.8e-12 74.7 42 88.1
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 1.1e-11 74.3 75 58.7
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 1.5e-11 73.9 75 56.0
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 1.5e-11 73.9 45 82.2
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 1.5e-11 73.9 65 64.6
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 1.5e-11 73.9 75 54.7
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 2.0e-11 73.6 75 57.3
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.0e-11 73.6 81 53.1
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 2.0e-11 73.6 71 59.2
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 3.3e-11 72.8 106 51.9
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 3.3e-11 72.8 75 56.0
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 5.7e-11 72.0 42 81.0
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 7.4e-11 71.6 76 52.6
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 7.4e-11 71.6 74 55.4
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 7.4e-11 71.6 43 81.4
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 9.7e-11 71.2 74 55.4
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 1.3e-10 70.9 68 55.9
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 1.3e-10 70.9 69 55.1
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 1.7e-10 70.5 67 56.7
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 1.7e-10 70.5 45 77.8
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 2.2e-10 70.1 76 55.3
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 3.7e-10 69.3 42 81.0
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 3.7e-10 69.3 75 57.3
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 3.7e-10 69.3 75 53.3
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 4.8e-10 68.9 79 53.2
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 6.3e-10 68.6 68 52.9
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 6.3e-10 68.6 68 52.9
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 6.3e-10 68.6 43 81.4
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 6.3e-10 68.6 43 79.1
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 6.3e-10 68.6 76 53.9
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 8.2e-10 68.2 44 75.0
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 8.2e-10 68.2 67 55.2
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 8.2e-10 68.2 67 55.2
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 8.2e-10 68.2 41 80.5
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 8.2e-10 68.2 41 80.5
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 8.2e-10 68.2 75 52.0
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 1.4e-09 67.4 43 74.4
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 1.4e-09 67.4 42 78.6
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 1.4e-09 67.4 127 41.7
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 1.4e-09 67.4 76 50.0
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 2.4e-09 66.6 68 51.5
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 2.4e-09 66.6 75 52.0
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 2.4e-09 66.6 52 65.4
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 3.1e-09 66.2 82 50.0
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 4.1e-09 65.9 42 78.6
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 5.3e-09 65.5 72 52.8
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 5.3e-09 65.5 79 46.8
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 5.3e-09 65.5 73 52.1
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 7.0e-09 65.1 44 72.7
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 7.0e-09 65.1 42 76.2
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 9.1e-09 64.7 69 53.6
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 9.1e-09 64.7 75 50.7
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 9.1e-09 64.7 43 74.4
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 1.2e-08 64.3 71 50.7
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 1.2e-08 64.3 75 50.7
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 1.2e-08 64.3 50 64.0
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 2.0e-08 63.5 75 53.3
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 2.6e-08 63.2 75 53.3
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 2.6e-08 63.2 72 51.4
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 2.6e-08 63.2 45 64.4
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 3.5e-08 62.8 151 35.1
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 4.5e-08 62.4 42 73.8
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 4.5e-08 62.4 42 73.8
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 4.5e-08 62.4 42 76.2
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 4.5e-08 62.4 42 73.8
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 4.5e-08 62.4 42 73.8
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 7.7e-08 61.6 42 73.8
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 7.7e-08 61.6 42 73.8
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 7.7e-08 61.6 72 50.0
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 1.3e-07 60.8 43 72.1
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 1.3e-07 60.8 42 73.8
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 1.3e-07 60.8 42 73.8
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 1.3e-07 60.8 42 73.8
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 1.3e-07 60.8 42 73.8
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 1.3e-07 60.8 42 73.8
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 1.3e-07 60.8 42 73.8
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 1.7e-07 60.5 42 71.4
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 5.0e-07 58.9 43 69.8
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 5.0e-07 58.9 41 68.3
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 8.5e-07 58.2 43 69.8
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 8.5e-07 58.2 53 58.5


User provided reference genes

Program Settings