Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 4.7e-224 780.8 374 100.0
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 4.2e-180 634.8 334 91.6
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 2.2e-160 569.3 334 80.8
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 2.6e-137 492.7 338 68.3
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 4.5e-134 481.9 334 70.4
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 7.7e-134 481.1 337 68.8
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 3.3e-132 475.7 304 75.7
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 3.6e-131 472.2 334 67.4
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 3.0e-130 469.2 315 69.8
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 2.6e-129 466.1 325 67.7
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 2.6e-129 466.1 328 68.9
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 3.4e-129 465.7 315 69.2
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 5.7e-129 464.9 339 65.8
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 1.7e-128 463.4 324 67.6
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 1.8e-127 459.9 309 71.8
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 9.2e-127 457.6 334 66.8
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 1.6e-126 456.8 334 66.2
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 1.6e-126 456.8 334 66.8
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 5.9e-126 454.9 310 69.7
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 5.9e-126 454.9 310 69.7
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 5.9e-126 454.9 318 68.6
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 7.8e-126 454.5 318 68.2
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 2.3e-125 453.0 365 61.6
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 2.9e-125 452.6 327 66.1
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 3.8e-125 452.2 310 70.6
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 3.8e-125 452.2 310 69.4
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 6.6e-125 451.4 315 69.2
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 2.5e-124 449.5 328 65.5
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 9.5e-124 447.6 327 65.7
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 9.5e-124 447.6 346 63.6
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 1.2e-123 447.2 331 66.5
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 1.2e-123 447.2 317 67.2
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 1.6e-123 446.8 335 66.0
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 1.4e-122 443.7 315 66.7
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 4.0e-122 442.2 309 68.3
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 1.2e-121 440.7 334 65.0
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 1.2e-121 440.7 313 69.3
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 2.6e-121 439.5 334 65.6
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 9.8e-121 437.6 337 62.6
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 2.2e-120 436.4 334 65.0
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 6.4e-120 434.9 318 65.7
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 6.4e-120 434.9 315 66.7
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 1.9e-119 433.3 334 65.3
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.9e-119 433.3 334 65.3
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 3.2e-119 432.6 316 66.1
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 4.1e-119 432.2 334 65.0
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 9.2e-119 431.0 323 64.7
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 1.6e-118 430.3 313 65.2
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 4.6e-118 428.7 312 65.4
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 1.3e-117 427.2 315 65.4
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 1.5e-116 423.7 333 61.9
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 1.9e-116 423.3 313 64.2
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 5.6e-116 421.8 327 60.6
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.6e-115 420.2 359 60.7
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 2.8e-115 419.5 425 52.9
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 3.6e-115 419.1 312 64.7
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 1.4e-114 417.2 322 62.4
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 1.8e-114 416.8 304 66.4
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 4.0e-114 415.6 311 65.0
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 2.6e-113 412.9 314 65.6
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 3.4e-113 412.5 311 64.6
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 4.4e-113 412.1 316 63.6
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 4.4e-113 412.1 340 60.9
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 1.3e-112 410.6 311 65.3
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 4.9e-112 408.7 318 62.6
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 6.4e-112 408.3 310 65.2
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 4.1e-111 405.6 318 63.8
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 5.4e-111 405.2 311 63.0
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 5.4e-111 405.2 311 63.0
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 7.0e-111 404.8 303 64.4
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 1.2e-110 404.1 320 61.9
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 2.1e-110 403.3 328 60.4
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 7.8e-110 401.4 311 63.3
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 1.3e-109 400.6 318 61.6
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 3.0e-109 399.4 311 62.1
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 3.9e-109 399.1 311 63.3
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 5.1e-109 398.7 336 58.3
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 1.2e-107 394.0 273 69.2
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 1.1e-106 391.0 314 60.8
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 2.3e-106 389.8 346 57.2
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 2.0e-105 386.7 309 60.8
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 2.0e-105 386.7 333 58.0
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 1.1e-103 380.9 443 48.1
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 4.1e-103 379.0 313 59.7
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 1.6e-102 377.1 312 59.3
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 2.1e-102 376.7 312 58.7
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 2.3e-101 373.2 315 58.7
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 1.1e-100 370.9 304 59.9
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 3.3e-100 369.4 314 58.3
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 7.3e-100 368.2 315 57.5
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 1.9e-95 353.6 311 55.9
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 3.9e-93 345.9 304 55.3
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 1.5e-92 344.0 301 56.8
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 3.3e-92 342.8 334 54.8
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 1.6e-91 340.5 306 56.2
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 1.8e-90 337.0 311 55.3
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 2.0e-89 333.6 337 49.6
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 4.6e-86 322.4 318 51.6
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 1.1e-84 317.8 248 64.1
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 2.1e-75 287.0 306 47.1
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 1.4e-71 274.2 314 44.3
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 1.6e-67 260.8 194 64.9
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 2.6e-65 253.4 309 42.7
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 2.2e-64 250.4 165 75.2
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 2.5e-55 220.3 313 39.9
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 4.5e-49 199.5 262 41.2
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 1.4e-47 194.5 136 69.9
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 1.1e-36 158.3 90 73.3
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 2.6e-36 157.1 138 56.5
Nn6g33134 Nelumbo nucifera HOM05D007134 ORTHO05D009004 1.2e-12 78.6 64 64.1


User provided reference genes

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