Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08219 Corylus avellana HOM05D008363 ORTHO05D010508 1.9e-83 312.4 150 100.0
Cfa012447 Carpinus fangiana HOM05D000816 ORTHO05D010508 1.3e-47 193.4 144 75.7
Cpa.g.sc227.8 Carica papaya HOM05D008363 ORTHO05D010508 1.6e-29 133.3 211 38.4
TAR636G2722 Trochodendron aralioides HOM05D008363 ORTHO05D010508 4.3e-27 125.2 205 38.0
TAR633G2165 Trochodendron aralioides HOM05D008363 ORTHO05D010508 7.4e-27 124.4 184 39.1
CSS0023279 Camellia sinensis var. sinensis HOM05D008363 ORTHO05D010508 9.6e-27 124.0 182 39.6
CSS0031173 Camellia sinensis var. sinensis HOM05D008363 ORTHO05D010508 9.6e-27 124.0 182 39.6
Thecc.03G227000 Theobroma cacao HOM05D008363 ORTHO05D010508 6.2e-26 121.3 206 37.9
Dinv25219 Davidia involucrata HOM05D008363 ORTHO05D010508 2.0e-24 116.3 141 49.6
Duzib084G1116 Durio zibethinus HOM05D008363 ORTHO05D010508 1.9e-22 109.8 208 36.1
RcHm_v2.0_Chr7g0209801 Rosa chinensis HOM05D008363 ORTHO05D010508 2.5e-22 109.4 207 33.3
TWI60G0018 Tripterygium wilfordii HOM05D008363 ORTHO05D010508 5.5e-22 108.2 187 36.4
Gohir.A03G000300 Gossypium hirsutum HOM05D008363 ORTHO05D010508 7.1e-22 107.8 206 37.9
Prupe.5G035100 Prunus persica HOM05D008363 ORTHO05D010508 7.1e-22 107.8 189 35.4
Actinidia14803 Actinidia chinensis HOM05D008363 ORTHO05D010508 9.3e-22 107.5 204 33.8
Gohir.D03G171900 Gossypium hirsutum HOM05D008363 ORTHO05D010508 1.2e-21 107.1 206 37.4
Psat2g136320 Pisum sativum HOM05D008363 ORTHO05D010508 1.6e-21 106.7 204 35.8
Aqoxy5G00023 Aquilegia oxysepala HOM05D008363 ORTHO05D010508 6.0e-21 104.8 194 33.0
FAN08G0799 Fragaria x ananassa HOM05D008363 ORTHO05D010508 7.9e-21 104.4 189 33.3
FAN13G1991 Fragaria x ananassa HOM05D008363 ORTHO05D010508 7.9e-21 104.4 189 33.3
Duzib084G0653 Durio zibethinus HOM05D008363 ORTHO05D010508 1.0e-20 104.0 154 42.9
FAN18G1001 Fragaria x ananassa HOM05D008363 ORTHO05D010508 1.3e-20 103.6 189 33.3
FvH4_5g22141 Fragaria vesca HOM05D008363 ORTHO05D010508 3.9e-20 102.1 189 32.8
Ca_06083_v3 Cicer arietinum L. HOM05D008363 ORTHO05D010508 5.1e-20 101.7 181 36.5
FAN04G2847 Fragaria x ananassa HOM05D008363 ORTHO05D010508 1.1e-19 100.5 189 32.3
Hma1.2p1_0303F.1_g119070 Hydrangea macrophylla HOM05D008363 ORTHO05D010508 3.3e-19 99.0 210 31.0
Ciclev10013884m.g Citrus clementina HOM05D008363 ORTHO05D010508 4.3e-19 98.6 184 35.3
Manes.15G182300 Manihot esculenta HOM05D008363 ORTHO05D010508 5.7e-19 98.2 203 31.5
Dinv28961 Davidia involucrata HOM05D008363 ORTHO05D010508 7.4e-19 97.8 202 34.2
Duzib205G1194 Durio zibethinus HOM05D008363 ORTHO05D010508 7.4e-19 97.8 192 33.3
COL.COLO4_17025 Corchorus olitorius HOM05D008363 ORTHO05D010508 1.3e-18 97.1 192 35.4
Glyma.09G204700 Glycine max HOM05D008363 ORTHO05D010508 4.1e-17 92.0 203 31.0
ECA240G1797 Erigeron canadensis HOM05D002571 ORTHO05D002868 8.5e-15 84.3 157 36.9
MD16G1273800 Malus domestica HOM05D008363 ORTHO05D010508 1.4e-14 83.6 64 60.9
DCAR_005636 Daucus carota HOM05D008363 ORTHO05D010508 3.2e-14 82.4 188 28.2
PGR031G1477 Punica granatum HOM05D008363 ORTHO05D010508 4.2e-14 82.0 193 31.1
MD06G1034800 Malus domestica HOM05D008363 ORTHO05D010508 1.6e-13 80.1 67 56.7
MELO3C013848.2 Cucumis melo HOM05D008363 ORTHO05D010508 2.7e-13 79.3 56 66.1
CsaV3_3G001670 Cucumis sativus L. HOM05D008363 ORTHO05D010508 3.6e-13 79.0 78 50.0
CANSAT21G1194 Cannabis sativa HOM05D008363 ORTHO05D010508 1.0e-12 77.4 195 27.2
Ciclev10023626m.g Citrus clementina HOM05D008363 ORTHO05D010508 1.4e-12 77.0 194 30.4
Cc08_g02830 Coffea canephora HOM05D008363 ORTHO05D010508 2.3e-12 76.3 207 27.5
Manes.05G195161 Manihot esculenta HOM05D008363 ORTHO05D010508 3.0e-12 75.9 208 26.0
DCAR_024961 Daucus carota HOM05D008363 ORTHO05D010508 1.1e-11 73.9 206 29.6
PGR042G3791 Punica granatum HOM05D008363 ORTHO05D010508 1.9e-11 73.2 44 68.2
Glyma.01G018200 Glycine max HOM05D008363 ORTHO05D010508 1.3e-10 70.5 72 48.6
Potri.001G141900 Populus trichocarpa HOM05D008363 ORTHO05D010508 1.7e-10 70.1 195 28.7
Lsat_1_v5_gn_6_79301 Lactuca sativa HOM05D008363 ORTHO05D010508 4.8e-10 68.6 143 31.5
Migut.A01011 Erythranthe guttata HOM05D008363 ORTHO05D010508 1.4e-09 67.0 191 25.7
MBI18_g13989_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.0e-08 63.2 66 48.5
Potri.014G146500 Populus trichocarpa HOM05D008363 ORTHO05D010508 8.5e-07 57.8 202 24.3


User provided reference genes

Program Settings