Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08173 Corylus avellana HOM05D007702 ORTHO05D009736 2.8e-163 578.6 291 100.0
Cfa012496 Carpinus fangiana HOM05D007702 ORTHO05D009736 2.7e-134 482.3 260 95.0
CiPaw.11G097300 Carya illinoinensis HOM05D007702 ORTHO05D009736 2.2e-80 303.1 285 61.8
Manes.06G177600 Manihot esculenta HOM05D007702 ORTHO05D009736 8.9e-69 264.6 241 59.3
QL12p001257 Quercus lobata HOM05D007702 ORTHO05D009736 4.9e-67 258.8 212 67.0
Thecc.06G057000 Theobroma cacao HOM05D007702 ORTHO05D009736 1.9e-63 246.9 268 55.6
Prupe.3G023000 Prunus persica HOM05D007702 ORTHO05D009736 1.6e-62 243.8 274 52.9
Duzib235G0870 Durio zibethinus HOM05D007702 ORTHO05D009736 3.6e-62 242.7 255 56.1
Gohir.A10G002000 Gossypium hirsutum HOM05D007702 ORTHO05D009736 2.3e-61 240.0 234 58.1
Gohir.D10G002100 Gossypium hirsutum HOM05D007702 ORTHO05D009736 2.0e-60 236.9 228 57.9
MD09G1165300 Malus domestica HOM05D007702 ORTHO05D009736 3.4e-60 236.1 274 55.1
Gorai.011G002500 Gossypium raimondii HOM05D007702 ORTHO05D009736 4.4e-60 235.7 228 57.9
Eucgr.J03180 Eucalyptus grandis HOM05D007702 ORTHO05D009736 3.7e-59 232.6 235 57.0
Cpa.g.sc155.12 Carica papaya HOM05D007702 ORTHO05D009736 8.3e-59 231.5 266 51.1
Sabra08G0002400 Salix brachista HOM05D007702 ORTHO05D009736 1.4e-58 230.7 253 54.5
Potri.008G004800 Populus trichocarpa HOM05D007702 ORTHO05D009736 1.6e-57 227.3 271 53.5
EL10Ac7g18156 Beta vulgaris HOM05D007702 ORTHO05D009736 2.0e-57 226.9 270 50.0
Ciclev10032212m.g Citrus clementina HOM05D007702 ORTHO05D009736 1.3e-56 224.2 253 52.2
AUR62001339 Chenopodium quinoa HOM05D007702 ORTHO05D009736 1.7e-56 223.8 275 50.2
BraA06t23478Z Brassica rapa HOM05D007702 ORTHO05D009736 3.0e-56 223.0 243 53.1
AUR62025666 Chenopodium quinoa HOM05D007702 ORTHO05D009736 5.0e-56 222.2 263 50.2
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 1.1e-55 221.1 251 49.4
CSS0020400 Camellia sinensis var. sinensis HOM05D007702 ORTHO05D009736 1.5e-55 220.7 261 49.4
A06p02690 Brassica napus HOM05D007702 ORTHO05D009736 7.3e-55 218.4 239 52.7
Solyc01g102860.2 Solanum lycopersicum HOM05D007702 ORTHO05D009736 9.5e-55 218.0 273 48.7
Cc03_g07590 Coffea canephora HOM05D007702 ORTHO05D009736 6.2e-54 215.3 237 53.6
COL.COLO4_31154 Corchorus olitorius HOM05D007702 ORTHO05D009736 6.2e-54 215.3 219 56.2
Sopen01g045260 Solanum pennellii HOM05D007702 ORTHO05D009736 2.3e-53 213.4 248 52.0
BcaB07g33554 Brassica carinata HOM05D007702 ORTHO05D009736 5.2e-53 212.2 236 52.5
CANSAT54G1387 Cannabis sativa HOM05D007702 ORTHO05D009736 6.8e-53 211.8 243 51.4
Ah.08g217790 Amaranthus hybridus HOM05D007702 ORTHO05D009736 1.2e-52 211.1 227 50.2
CANSAT54G2309 Cannabis sativa HOM05D007702 ORTHO05D009736 1.5e-52 210.7 170 65.3
Aqoxy7G02739 Aquilegia oxysepala HOM05D007702 ORTHO05D009736 2.6e-52 209.9 226 53.5
BcaC08g43279 Brassica carinata HOM05D007702 ORTHO05D009736 2.6e-52 209.9 232 53.0
C06p06290 Brassica napus HOM05D007702 ORTHO05D009736 2.6e-52 209.9 232 53.0
BolC6t35738H Brassica oleracea HOM05D007702 ORTHO05D009736 2.6e-52 209.9 232 53.0
TAR383G0542 Trochodendron aralioides HOM05D007702 ORTHO05D009736 3.4e-52 209.5 360 40.8
PGR042G2668 Punica granatum HOM05D007702 ORTHO05D009736 5.8e-52 208.8 274 48.9
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 7.5e-52 208.4 270 47.4
MBI07_g12934_MAGBIO Magnolia biondii HOM05D007702 ORTHO05D009736 8.3e-51 204.9 187 57.8
Peaxi162Scf00051g00198 Petunia axillaris HOM05D007702 ORTHO05D009736 1.4e-50 204.1 287 47.0
RcHm_v2.0_Chr2g0149381 Rosa chinensis HOM05D007702 ORTHO05D009736 4.1e-50 202.6 223 55.6
Nitab4.5_0010634g0010 Nicotiana tabacum HOM05D007702 ORTHO05D009736 5.4e-50 202.2 247 50.2
Thhalv10012117m.g Eutrema salsugineum HOM05D007702 ORTHO05D009736 7.1e-50 201.8 244 51.2
PGSC0003DMG400018255 Solanum tuberosum HOM05D007702 ORTHO05D009736 1.2e-49 201.1 226 50.9
DCAR_007958 Daucus carota HOM05D007702 ORTHO05D009736 4.6e-49 199.1 236 48.7
Nn2g12749 Nelumbo nucifera HOM05D007702 ORTHO05D009736 4.6e-49 199.1 205 53.2
Nitab4.5_0006053g0030 Nicotiana tabacum HOM05D007702 ORTHO05D009736 2.3e-48 196.8 228 50.4
Ca_00991_v3 Cicer arietinum L. HOM05D007702 ORTHO05D009736 3.0e-48 196.4 121 76.0
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.1e-47 194.5 224 54.0
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.1e-47 194.5 227 53.3
Atru.chr1.2666 Acer truncatum HOM05D007702 ORTHO05D009736 1.9e-47 193.7 269 48.0
THA.LOC104817895 Tarenaya hassleriana HOM05D007702 ORTHO05D009736 9.5e-47 191.4 262 45.0
Aa31LG10G3400 Aethionema arabicum HOM05D007702 ORTHO05D009736 1.2e-46 191.0 278 44.2
Migut.I01200 Erythranthe guttata HOM05D007702 ORTHO05D009736 1.6e-46 190.7 133 70.7
CDE05G1247 Ceratophyllum demersum HOM05D007702 ORTHO05D009736 2.1e-46 190.3 316 42.1
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.8e-46 189.9 235 51.9
Carub.0001s3998 Capsella rubella HOM05D007702 ORTHO05D009736 3.6e-46 189.5 239 49.0
Psat5g305320 Pisum sativum HOM05D007702 ORTHO05D009736 3.6e-46 189.5 227 49.3
Sp1g37800 Schrenkiella parvula HOM05D007702 ORTHO05D009736 8.1e-46 188.3 238 47.5
arahy.Tifrunner.gnm1.ann1.TT2UX9 Arachis hypogaea HOM05D007702 ORTHO05D009736 2.3e-45 186.8 262 43.9
TPR.G39495 Trifolium pratense HOM05D007702 ORTHO05D009736 2.3e-45 186.8 151 63.6
FvH4_6g36940 Fragaria vesca HOM05D007702 ORTHO05D009736 3.1e-45 186.4 221 50.2
AT1G51080 Arabidopsis thaliana HOM05D007702 ORTHO05D009736 4.0e-45 186.0 242 47.9
CARHR041100 Cardamine hirsuta HOM05D007702 ORTHO05D009736 5.2e-45 185.7 242 47.5
GSVIVG01029550001 Vitis vinifera HOM05D007702 ORTHO05D009736 1.2e-44 184.5 232 50.9
Medtr2g101430 Medicago truncatula HOM05D007702 ORTHO05D009736 2.0e-44 183.7 232 47.0
AL1G58880 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 2.6e-44 183.3 245 46.9
unitig_748.g7485 Utricularia gibba HOM05D007702 ORTHO05D009736 2.6e-44 183.3 233 48.1
ClCG09G001650 Citrullus lanatus HOM05D007702 ORTHO05D009736 3.4e-44 183.0 216 50.5
CsaV3_7G033690 Cucumis sativus L. HOM05D007702 ORTHO05D009736 9.9e-44 181.4 235 45.1
CAN.G2401.1 Capsicum annuum HOM05D000005 ORTHO05D000012 1.0e-40 171.4 187 50.8
Oeu049633.1 Olea europaea HOM05D007702 ORTHO05D009736 2.3e-40 170.2 214 46.7
SGA_v2.0_scaffold71G23985 Striga asiatica HOM05D007702 ORTHO05D009736 6.6e-40 168.7 235 45.5
MELO3C024282.2 Cucumis melo HOM05D007702 ORTHO05D009736 1.9e-39 167.2 235 45.1
PSO144G0036 Papaver somniferum HOM05D007702 ORTHO05D009736 3.6e-38 162.9 236 47.9
PSO423G0097 Papaver somniferum HOM05D007702 ORTHO05D009736 1.4e-37 161.0 236 45.8
Lsat_1_v5_gn_1_39381 Lactuca sativa HOM05D007702 ORTHO05D009736 8.9e-37 158.3 183 51.9
ATR1126G014 Amborella trichopoda HOM05D007702 ORTHO05D009736 7.6e-36 155.2 126 61.1
Gorai.011G091300 Gossypium raimondii HOM05D007702 ORTHO05D009736 4.9e-35 152.5 222 45.0
Aa31LG6G10000 Aethionema arabicum HOM05D007702 ORTHO05D009736 1.9e-34 150.6 129 56.6
Os03g0138900 Oryza sativa ssp. japonica HOM05D007702 ORTHO05D009736 9.3e-34 148.3 254 40.6
Rhsim08G0250300 Rhododendron simsii HOM05D007702 ORTHO05D009736 9.3e-34 148.3 291 38.8
vmacro18744 Vaccinium macrocarpon HOM05D007702 ORTHO05D009736 6.0e-33 145.6 130 50.0
ECA236G1927 Erigeron canadensis HOM05D007702 ORTHO05D009736 1.1e-31 141.4 218 44.0
SalBow6G4959 Salvia bowleyana HOM05D007702 ORTHO05D009736 4.3e-31 139.4 206 44.2
Mapoly0020s0094 Marchantia polymorpha HOM05D007702 ORTHO05D009736 8.4e-27 125.2 228 33.8
Pp3c5_18880 Physcomitrium patens HOM05D007702 ORTHO05D009736 2.4e-26 123.6 258 34.1
SEGI_14624 Sequoiadendron giganteum HOM05D007702 ORTHO05D009736 2.7e-25 120.2 226 35.0
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.3e-24 117.9 185 46.5
EL10Ac3g06847 Beta vulgaris HOM05D000495 ORTHO05D009736 2.3e-24 117.1 121 50.4
Aa31LG3G5120 Aethionema arabicum HOM05D007702 ORTHO05D009736 5.1e-24 115.9 153 46.4
AagrBONN_evm.TU.Sc2ySwM_228.5746 Anthoceros agrestis HOM05D007702 ORTHO05D009736 2.1e-22 110.5 229 33.6
Zm00001eb230260 Zea mays HOM05D007702 ORTHO05D009736 1.5e-20 104.4 247 33.2
FAN10G3703 Fragaria x ananassa HOM05D007702 ORTHO05D009736 2.1e-14 84.0 170 38.2
Dinv37777 Davidia involucrata HOM05D000532 ORTHO05D002745 6.9e-13 79.0 151 38.4
FAN02G1843 Fragaria x ananassa HOM05D007702 ORTHO05D009736 2.5e-10 70.5 146 37.7
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 9.3e-10 68.6 53 58.5
AL3G14490 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 3.9e-08 63.2 51 56.9
FAN07G0391 Fragaria x ananassa HOM05D007702 ORTHO05D009736 4.8e-06 56.2 169 32.0


User provided reference genes

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