Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08171 Corylus avellana HOM05D002388 ORTHO05D008833 1.4e-51 206.1 108 100.0
QL12p001301 Quercus lobata HOM05D002388 ORTHO05D008833 9.7e-37 156.8 92 85.9
TAR375G0363 Trochodendron aralioides HOM05D002388 ORTHO05D008833 2.0e-34 149.1 86 88.4
Lj1g0006191 Lotus japonicus HOM05D002388 ORTHO05D008833 5.9e-34 147.5 92 81.5
Eucgr.D02219 Eucalyptus grandis HOM05D002388 ORTHO05D008833 1.7e-33 146.0 81 90.1
MD06G1025500 Malus domestica HOM05D002388 ORTHO05D008833 1.7e-33 146.0 81 91.4
Prupe.5G029600 Prunus persica HOM05D002388 ORTHO05D008833 1.7e-33 146.0 81 91.4
MD16G1280900 Malus domestica HOM05D002388 ORTHO05D008833 2.9e-33 145.2 81 90.1
Potri.001G138100 Populus trichocarpa HOM05D002388 ORTHO05D008833 3.8e-33 144.8 81 87.7
CiPaw.11G097500 Carya illinoinensis HOM05D002388 ORTHO05D008833 5.0e-33 144.4 81 90.1
Dinv28991 Davidia involucrata HOM05D002388 ORTHO05D008833 5.0e-33 144.4 81 92.6
Psat4g122960 Pisum sativum HOM05D002388 ORTHO05D008833 5.0e-33 144.4 87 83.9
Sabra01G0106900 Salix brachista HOM05D002388 ORTHO05D008833 5.0e-33 144.4 81 87.7
TPR.G3364 Trifolium pratense HOM05D002388 ORTHO05D008833 5.0e-33 144.4 81 91.4
arahy.Tifrunner.gnm1.ann1.Y11EX9 Arachis hypogaea HOM05D002388 ORTHO05D008833 6.5e-33 144.1 81 87.7
DCAR_004281 Daucus carota HOM05D002388 ORTHO05D008833 1.1e-32 143.3 81 90.1
Hma1.2p1_0870F.1_g230830 Hydrangea macrophylla HOM05D002388 ORTHO05D008833 1.1e-32 143.3 82 87.8
THA.LOC104804589 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 1.1e-32 143.3 81 91.4
Actinidia14785 Actinidia chinensis HOM05D002388 ORTHO05D008833 1.4e-32 142.9 86 86.0
PGR031G2620 Punica granatum HOM05D002388 ORTHO05D008833 2.5e-32 142.1 79 91.1
MELO3C013830.2 Cucumis melo HOM05D002388 ORTHO05D008833 3.2e-32 141.7 84 83.3
Glyma.10G041600 Glycine max HOM05D002388 ORTHO05D008833 3.2e-32 141.7 81 88.9
Nn3g19407 Nelumbo nucifera HOM05D002388 ORTHO05D008833 3.2e-32 141.7 81 88.9
FAN04G1000 Fragaria x ananassa HOM05D002388 ORTHO05D008833 4.2e-32 141.4 101 76.2
Ciclev10003014m.g Citrus clementina HOM05D002388 ORTHO05D008833 5.5e-32 141.0 81 87.7
Medtr8g066600 Medicago truncatula HOM05D002388 ORTHO05D008833 5.5e-32 141.0 81 87.7
TWI60G0513 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 7.2e-32 140.6 81 85.2
TWI81G0136 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 7.2e-32 140.6 81 84.0
CiPaw.12G067300 Carya illinoinensis HOM05D002388 ORTHO05D008833 9.3e-32 140.2 81 87.7
CsaV3_3G001440 Cucumis sativus L. HOM05D002388 ORTHO05D008833 9.3e-32 140.2 81 87.7
FAN18G1485 Fragaria x ananassa HOM05D002388 ORTHO05D008833 1.2e-31 139.8 81 88.9
TAR119G0002 Trochodendron aralioides HOM05D002388 ORTHO05D008833 1.2e-31 139.8 81 87.7
vmacro14193 Vaccinium macrocarpon HOM05D002388 ORTHO05D008833 1.2e-31 139.8 81 87.7
Cc08_g03400 Coffea canephora HOM05D002388 ORTHO05D008833 1.6e-31 139.4 81 86.4
Glyma.13G128600 Glycine max HOM05D002388 ORTHO05D008833 1.6e-31 139.4 81 87.7
EL10Ac5g12027 Beta vulgaris HOM05D002388 ORTHO05D008833 2.1e-31 139.0 81 86.4
CSS0033524 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 2.1e-31 139.0 81 87.7
RcHm_v2.0_Chr7g0211611 Rosa chinensis HOM05D002388 ORTHO05D008833 2.1e-31 139.0 81 88.9
CSS0026703 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 2.7e-31 138.7 81 87.7
Duzib205G0142 Durio zibethinus HOM05D002388 ORTHO05D008833 2.7e-31 138.7 81 88.9
Thecc.03G308600 Theobroma cacao HOM05D002388 ORTHO05D008833 2.7e-31 138.7 81 87.7
FAN08G0310 Fragaria x ananassa HOM05D002388 ORTHO05D008833 3.6e-31 138.3 81 86.4
Ah.12g055420 Amaranthus hybridus HOM05D002388 ORTHO05D008833 4.6e-31 137.9 81 84.0
SalBow6G3465 Salvia bowleyana HOM05D002388 ORTHO05D008833 4.6e-31 137.9 81 86.4
Sed0013912 Sechium edule HOM05D002388 ORTHO05D008833 4.6e-31 137.9 81 86.4
CANSAT21G0073 Cannabis sativa HOM05D002388 ORTHO05D008833 6.1e-31 137.5 81 88.9
AUR62018655 Chenopodium quinoa HOM05D002388 ORTHO05D008833 6.1e-31 137.5 81 87.7
Cpa.g.sc13.304 Carica papaya HOM05D002388 ORTHO05D008833 7.9e-31 137.1 81 88.9
Gohir.D08G175050 Gossypium hirsutum HOM05D002388 ORTHO05D008833 7.9e-31 137.1 81 86.4
Gorai.004G182800 Gossypium raimondii HOM05D002388 ORTHO05D008833 7.9e-31 137.1 81 86.4
Medtr2g014320 Medicago truncatula HOM05D002388 ORTHO05D008833 7.9e-31 137.1 78 87.2
GSVIVG01013070001 Vitis vinifera HOM05D002388 ORTHO05D008833 7.9e-31 137.1 78 85.9
Manes.04G058600 Manihot esculenta HOM05D002388 ORTHO05D008833 1.0e-30 136.7 79 86.1
AUR62007344 Chenopodium quinoa HOM05D002388 ORTHO05D008833 1.4e-30 136.3 81 87.7
Duzib068G0043 Durio zibethinus HOM05D002388 ORTHO05D008833 1.4e-30 136.3 81 87.7
COL.COLO4_16958 Corchorus olitorius HOM05D002388 ORTHO05D008833 3.9e-30 134.8 82 86.6
Migut.A01083 Erythranthe guttata HOM05D002388 ORTHO05D008833 3.9e-30 134.8 81 81.5
SGA_v2.0_scaffold20G09240 Striga asiatica HOM05D002388 ORTHO05D008833 3.9e-30 134.8 80 82.5
Aa31LG4G4590 Aethionema arabicum HOM05D002388 ORTHO05D008833 6.7e-30 134.0 81 86.4
A02p19260 Brassica napus HOM05D002388 ORTHO05D008833 6.7e-30 134.0 81 86.4
BolC2t09212H Brassica oleracea HOM05D002388 ORTHO05D008833 6.7e-30 134.0 81 86.4
BraA07t31559Z Brassica rapa HOM05D002388 ORTHO05D008833 6.7e-30 134.0 81 86.4
Thhalv10019650m.g Eutrema salsugineum HOM05D002388 ORTHO05D008833 6.7e-30 134.0 81 86.4
PSO384G4479 Papaver somniferum HOM05D002388 ORTHO05D008833 6.7e-30 134.0 81 85.2
AL2G34200 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 8.8e-30 133.7 82 82.9
BraA02t06971Z Brassica rapa HOM05D002388 ORTHO05D008833 8.8e-30 133.7 81 86.4
CSS0009097 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 8.8e-30 133.7 80 86.2
Carub.0002s2112 Capsella rubella HOM05D002388 ORTHO05D008833 8.8e-30 133.7 81 85.2
Nitab4.5_0000556g0150 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.1e-29 133.3 81 82.7
AT1G74340 Arabidopsis thaliana HOM05D002388 ORTHO05D008833 1.5e-29 132.9 81 84.0
HanXRQChr17g0538091 Helianthus annuus HOM05D002388 ORTHO05D008833 1.5e-29 132.9 81 80.2
Phvul.003G283500 Phaseolus vulgaris HOM05D002388 ORTHO05D008833 1.5e-29 132.9 81 80.2
Sp5g29500 Schrenkiella parvula HOM05D002388 ORTHO05D008833 1.5e-29 132.9 81 85.2
BcaC08g46864 Brassica carinata HOM05D002388 ORTHO05D008833 1.9e-29 132.5 81 86.4
BolC6t39879H Brassica oleracea HOM05D002388 ORTHO05D008833 1.9e-29 132.5 81 86.4
CARHR067600 Cardamine hirsuta HOM05D002388 ORTHO05D008833 1.9e-29 132.5 81 84.0
Nitab4.5_0002778g0070 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.9e-29 132.5 80 83.8
PSO339G0280 Papaver somniferum HOM05D002388 ORTHO05D008833 1.9e-29 132.5 81 84.0
Peaxi162Scf00185g00821 Petunia axillaris HOM05D002388 ORTHO05D008833 1.9e-29 132.5 81 82.7
CAN.G137.4 Capsicum annuum HOM05D002388 ORTHO05D008833 2.5e-29 132.1 81 81.5
ECA246G0855 Erigeron canadensis HOM05D002388 ORTHO05D008833 3.3e-29 131.7 81 80.2
Peaxi162Scf00045g00216 Petunia axillaris HOM05D002388 ORTHO05D008833 3.3e-29 131.7 81 81.5
CSS0006499 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 4.3e-29 131.3 80 85.0
unitig_32.g10897 Utricularia gibba HOM05D002388 ORTHO05D008833 5.7e-29 131.0 81 81.5
Solyc08g005210.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 7.4e-29 130.6 81 81.5
Sopen08g001240 Solanum pennellii HOM05D002388 ORTHO05D008833 7.4e-29 130.6 81 81.5
Os11g0311550 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 1.3e-28 129.8 79 82.3
CAN.G474.16 Capsicum annuum HOM05D002388 ORTHO05D008833 3.7e-28 128.3 81 79.0
Lsat_1_v5_gn_3_19620 Lactuca sativa HOM05D002388 ORTHO05D008833 1.4e-27 126.3 83 75.9
Lalb_Chr05g0225791 Lupinus albus HOM05D002388 ORTHO05D008833 1.8e-27 125.9 81 81.5
Nitab4.5_0001632g0030 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.8e-27 125.9 81 77.8
Sopen06g021590 Solanum pennellii HOM05D002388 ORTHO05D008833 3.1e-27 125.2 81 76.5
CDE05G0657 Ceratophyllum demersum HOM05D002388 ORTHO05D008833 4.1e-27 124.8 80 75.0
PGSC0003DMG400003487 Solanum tuberosum HOM05D002388 ORTHO05D008833 4.1e-27 124.8 81 79.0
Nitab4.5_0000109g0080 Nicotiana tabacum HOM05D002388 ORTHO05D008833 5.3e-27 124.4 81 76.5
Peaxi162Scf00038g00010 Petunia axillaris HOM05D002388 ORTHO05D008833 9.1e-27 123.6 79 77.2
PGSC0003DMG400016784 Solanum tuberosum HOM05D002388 ORTHO05D008833 9.1e-27 123.6 81 75.3
Solyc06g066400.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 1.2e-26 123.2 81 75.3
ATR0564G363 Amborella trichopoda HOM05D002388 ORTHO05D008833 5.9e-26 120.9 81 76.5
THA.LOC104808763 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 2.7e-23 112.1 76 76.3
Nn1g00187 Nelumbo nucifera HOM05D002388 ORTHO05D008833 3.0e-22 108.6 57 93.0
SEGI_36022 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 6.7e-22 107.5 81 65.4
Mapoly0067s0029 Marchantia polymorpha HOM05D002388 ORTHO05D008833 3.3e-21 105.1 80 62.5
PGSC0003DMG400043827 Solanum tuberosum HOM05D002388 ORTHO05D008833 4.8e-20 101.3 81 67.9
arahy.Tifrunner.gnm1.ann1.G961TR Arachis hypogaea HOM05D002388 ORTHO05D008833 1.8e-19 99.4 93 58.1
CSS0023919 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 3.4e-18 95.1 78 69.2
Pp3c22_2990 Physcomitrium patens HOM05D002388 ORTHO05D008833 3.4e-18 95.1 80 60.0
AagrBONN_evm.TU.Sc2ySwM_228.4391 Anthoceros agrestis HOM05D003123 ORTHO05D003492 7.7e-18 94.0 76 56.6
Hund14364 Selenicereus undatus HOM05D002388 ORTHO05D008833 7.7e-18 94.0 51 90.2
SEGI_14802 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 3.2e-16 88.6 70 64.3
ClCG10G001370 Citrullus lanatus HOM05D002388 ORTHO05D008833 1.6e-15 86.3 53 81.1
Os02g0140101 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 2.7e-15 85.5 49 83.7
BcaB05g24849 Brassica carinata HOM05D002388 ORTHO05D008833 8.0e-15 84.0 50 84.0
PGSC0003DMG400016734 Solanum tuberosum HOM05D002388 ORTHO05D008833 2.3e-14 82.4 55 74.5
MCO11G506 Micromonas commoda HOM05D002388 ORTHO05D008833 4.2e-08 61.6 74 35.1
Peaxi162Scf00218g02111 Petunia axillaris HOM05D004298 ORTHO05D008833 4.7e-07 58.2 39 64.1


User provided reference genes

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