Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 3.8e-28 127.5 65 100.0
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 7.9e-26 119.8 63 93.7
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 9.6e-24 112.8 63 90.5
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 9.6e-24 112.8 63 90.5
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 1.3e-23 112.5 63 88.9
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 3.7e-23 110.9 63 85.7
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 4.8e-23 110.5 64 84.4
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 1.8e-22 108.6 63 87.3
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 3.1e-22 107.8 63 85.7
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 5.3e-22 107.1 63 85.7
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 6.9e-22 106.7 62 85.5
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 1.2e-21 105.9 63 84.1
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 2.6e-21 104.8 63 82.5
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 3.4e-21 104.4 63 82.5
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 5.8e-21 103.6 63 82.5
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 5.8e-21 103.6 63 82.5
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 7.6e-21 103.2 63 85.7
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 1.0e-20 102.8 63 81.0
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 8.4e-20 99.8 63 81.0
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 2.5e-19 98.2 65 81.5
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 3.2e-19 97.8 63 79.4
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 5.5e-19 97.1 63 79.4
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 1.2e-18 95.9 63 77.8
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 2.1e-18 95.1 63 69.8
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 6.0e-18 93.6 63 76.2
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 7.9e-18 93.2 65 70.8
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 7.9e-18 93.2 65 70.8
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 7.9e-18 93.2 65 70.8
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 1.0e-17 92.8 63 74.6
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 1.3e-17 92.4 62 74.2
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 3.0e-17 91.3 64 68.8
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 5.1e-17 90.5 63 74.6
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 6.7e-17 90.1 63 74.6
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 8.7e-17 89.7 64 70.3
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 8.7e-17 89.7 66 66.7
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 1.1e-16 89.4 61 77.0
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 3.3e-16 87.8 63 71.4
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 3.3e-16 87.8 66 65.2
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 4.3e-16 87.4 66 68.2
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 4.3e-16 87.4 66 68.2
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 4.3e-16 87.4 66 65.2
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 4.3e-16 87.4 61 75.4
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 5.7e-16 87.0 66 65.2
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 5.7e-16 87.0 66 66.7
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 7.4e-16 86.7 65 69.2
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 9.6e-16 86.3 66 63.6
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 9.6e-16 86.3 66 63.6
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 9.6e-16 86.3 67 62.7
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 9.6e-16 86.3 66 63.6
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 1.3e-15 85.9 66 63.6
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 1.3e-15 85.9 66 63.6
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 1.3e-15 85.9 66 63.6
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 1.3e-15 85.9 66 63.6
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 1.3e-15 85.9 66 63.6
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 1.3e-15 85.9 65 67.7
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 1.6e-15 85.5 67 62.7
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 1.6e-15 85.5 67 62.7
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 1.6e-15 85.5 63 73.0
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 1.6e-15 85.5 66 63.6
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 2.1e-15 85.1 65 67.7
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 3.7e-15 84.3 63 68.3
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 6.3e-15 83.6 61 70.5
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 6.3e-15 83.6 63 69.8
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 8.2e-15 83.2 66 65.2
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 1.1e-14 82.8 65 64.6
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 1.4e-14 82.4 66 63.6
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 1.4e-14 82.4 60 65.0
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 1.8e-14 82.0 51 74.5
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 1.8e-14 82.0 67 61.2
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 1.8e-14 82.0 51 74.5
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 1.8e-14 82.0 63 69.8
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 2.4e-14 81.6 66 63.6
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 3.1e-14 81.3 65 63.1
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 3.1e-14 81.3 61 63.9
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 3.1e-14 81.3 61 72.1
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 3.1e-14 81.3 61 72.1
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 5.3e-14 80.5 62 61.3
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 6.9e-14 80.1 66 60.6
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 1.2e-13 79.3 80 56.2
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 2.0e-13 78.6 61 60.7
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 2.0e-13 78.6 64 64.1
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 3.4e-13 77.8 61 67.2
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 3.8e-12 74.3 61 63.9
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 6.5e-12 73.6 63 63.5
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 6.5e-12 73.6 67 61.2
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 1.1e-11 72.8 45 75.6
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 1.4e-11 72.4 63 63.5
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 1.4e-11 72.4 63 61.9
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.4e-11 72.4 63 61.9
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.4e-11 72.4 63 61.9
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.4e-11 72.4 63 61.9
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.4e-11 72.4 63 61.9
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.9e-11 72.0 63 61.9
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 1.9e-11 72.0 63 61.9
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 1.9e-11 72.0 61 62.3
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 5.5e-11 70.5 61 60.7
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 5.5e-11 70.5 63 58.7
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 9.3e-11 69.7 66 57.6
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 6.1e-10 67.0 64 59.4
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 1.0e-09 66.2 63 58.7
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 1.0e-09 66.2 63 58.7
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 3.9e-09 64.3 34 82.4
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 3.9e-09 64.3 63 57.1
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 1.5e-08 62.4 62 54.8
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 1.5e-08 62.4 64 56.2
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 2.5e-08 61.6 63 55.6
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 7.4e-08 60.1 63 54.0
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 6.3e-07 57.0 40 67.5
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 8.2e-07 56.6 40 65.0
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 2.4e-06 55.1 42 61.9
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 5.3e-06 53.9 28 82.1


User provided reference genes

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