Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08086 Corylus avellana HOM05D030319 ORTHO05D024879 2.7e-124 448.7 239 100.0
Haze_08083 Corylus avellana HOM05D030319 ORTHO05D024879 2.3e-123 445.7 239 99.2
Cfa012577 Carpinus fangiana HOM05D030319 ORTHO05D024879 1.3e-81 307.0 182 89.0
QL12p000905 Quercus lobata HOM05D030319 ORTHO05D024879 9.0e-35 151.4 233 39.1
Lsat_1_v5_gn_2_38441 Lactuca sativa HOM05D002687 ORTHO05D002052 1.6e-12 77.4 156 32.1
HanXRQChr12g0382031 Helianthus annuus HOM05D002687 ORTHO05D002052 8.2e-12 75.1 156 30.8
ECA238G0184 Erigeron canadensis HOM05D002687 ORTHO05D002052 1.1e-11 74.7 163 34.4
Lsat_1_v5_gn_3_114060 Lactuca sativa HOM05D002687 ORTHO05D002052 1.1e-11 74.7 156 29.5
HanXRQChr13g0420231 Helianthus annuus HOM05D002687 ORTHO05D002052 1.5e-10 70.9 156 29.5
Sabra16G0125800 Salix brachista HOM05D002687 ORTHO05D002052 2.6e-10 70.1 162 32.1
Cfa009948 Carpinus fangiana HOM05D002687 ORTHO05D002052 3.4e-10 69.7 165 33.3
Prupe.6G142400 Prunus persica HOM05D002687 ORTHO05D002052 4.5e-10 69.3 157 30.6
CiPaw.13G131000 Carya illinoinensis HOM05D002687 ORTHO05D002052 5.9e-10 68.9 217 30.0
MBI01_g04539_MAGBIO Magnolia biondii HOM05D002687 ORTHO05D002052 5.9e-10 68.9 201 27.9
Rhsim03G0065900 Rhododendron simsii HOM05D008136 ORTHO05D002052 5.9e-10 68.9 161 30.4
TAR633G0472 Trochodendron aralioides HOM05D002687 ORTHO05D002052 7.7e-10 68.6 197 29.4
BraA04t17653Z Brassica rapa HOM05D002687 ORTHO05D002052 1.3e-09 67.8 161 28.6
Cfa016687 Carpinus fangiana HOM05D008136 ORTHO05D002052 1.3e-09 67.8 166 28.3
Potri.006G204000 Populus trichocarpa HOM05D008136 ORTHO05D002052 2.9e-09 66.6 163 28.2
BcaC02g08259 Brassica carinata HOM05D002687 ORTHO05D002052 3.8e-09 66.2 159 28.3
C04p56620 Brassica napus HOM05D002687 ORTHO05D002052 3.8e-09 66.2 159 28.3
BolC4t27189H Brassica oleracea HOM05D002687 ORTHO05D002052 3.8e-09 66.2 159 28.3
CDE04G2921 Ceratophyllum demersum HOM05D002687 ORTHO05D002052 5.0e-09 65.9 162 26.5
Medtr4g051652 Medicago truncatula HOM05D002687 ORTHO05D002052 5.0e-09 65.9 192 29.2
A04p20800 Brassica napus HOM05D002687 ORTHO05D002052 1.1e-08 64.7 161 28.0
HanXRQChr14g0432161 Helianthus annuus HOM05D002687 ORTHO05D002052 1.1e-08 64.7 162 29.6
QL07p036935 Quercus lobata HOM05D002687 ORTHO05D002052 1.1e-08 64.7 162 28.4
RcHm_v2.0_Chr5g0073621 Rosa chinensis HOM05D010052 ORTHO05D010666 1.1e-08 64.7 218 27.5
TAR369G0448 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.1e-08 64.7 162 30.2
Actinidia07275 Actinidia chinensis HOM05D002687 ORTHO05D002052 1.4e-08 64.3 163 28.8
Hma1.2p1_0097F.1_g048090 Hydrangea macrophylla HOM05D002687 ORTHO05D002052 2.5e-08 63.5 160 30.6
Cfa016686 Carpinus fangiana HOM05D002687 ORTHO05D002052 3.2e-08 63.2 163 28.8
BcaB06g28135 Brassica carinata HOM05D002687 ORTHO05D002052 4.2e-08 62.8 159 26.4
Actinidia32046 Actinidia chinensis HOM05D000182 ORTHO05D000112 7.2e-08 62.0 151 29.1
CDE12G0475 Ceratophyllum demersum HOM05D000139 ORTHO05D000103 7.2e-08 62.0 202 24.8
Haze_19713 Corylus avellana HOM05D008136 ORTHO05D002052 9.4e-08 61.6 166 27.7
CARHR119770 Cardamine hirsuta HOM05D002687 ORTHO05D002052 1.2e-07 61.2 159 26.4
Nn2g14283 Nelumbo nucifera HOM05D002687 ORTHO05D002052 1.2e-07 61.2 163 28.2
PSO339G2661 Papaver somniferum HOM05D002687 ORTHO05D002052 2.1e-07 60.5 203 26.6
BcaB02g10079 Brassica carinata HOM05D002687 ORTHO05D002052 2.7e-07 60.1 155 26.5
Cpa.g.sc1142.1 Carica papaya HOM05D002687 ORTHO05D002052 2.7e-07 60.1 160 26.2
SalBow3G2018 Salvia bowleyana HOM05D002687 ORTHO05D002052 3.6e-07 59.7 162 27.8
PSO384G1068 Papaver somniferum HOM05D002687 ORTHO05D002052 4.6e-07 59.3 157 28.7
Carub.0001s0701 Capsella rubella HOM05D002687 ORTHO05D002052 7.9e-07 58.5 185 25.9
MD12G1038800 Malus domestica HOM05D002687 ORTHO05D002052 7.9e-07 58.5 157 29.9
SGA_v2.0_scaffold637G53306 Striga asiatica HOM05D002687 ORTHO05D002052 1.0e-06 58.2 162 29.0
Potri.009G019800 Populus trichocarpa HOM05D002687 ORTHO05D002052 1.8e-06 57.4 164 31.7
Aqoxy1G00679 Aquilegia oxysepala HOM05D002687 ORTHO05D002052 2.3e-06 57.0 167 25.1
COL.COLO4_29586 Corchorus olitorius HOM05D008136 ORTHO05D002052 3.9e-06 56.2 157 27.4
TPR.G19617 Trifolium pratense HOM05D000980 ORTHO05D000649 3.9e-06 56.2 150 28.0
BcaC06g32916 Brassica carinata HOM05D008136 ORTHO05D002052 5.1e-06 55.8 219 25.1
Prupe.7G048100 Prunus persica HOM05D010052 ORTHO05D010666 5.1e-06 55.8 224 24.1
A09p45540 Brassica napus HOM05D008136 ORTHO05D002052 6.7e-06 55.5 222 26.1
BraA09t40016Z Brassica rapa HOM05D008136 ORTHO05D002052 6.7e-06 55.5 222 26.1
Sp5g09840 Schrenkiella parvula HOM05D008136 ORTHO05D002052 6.7e-06 55.5 217 28.6
Psat1g209680 Pisum sativum HOM05D000733 ORTHO05D000649 8.8e-06 55.1 138 29.0


User provided reference genes

Program Settings