Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08083 Corylus avellana HOM05D030319 ORTHO05D024879 2.1e-124 449.1 239 100.0
Haze_08086 Corylus avellana HOM05D030319 ORTHO05D024879 2.3e-123 445.7 239 99.2
Cfa012577 Carpinus fangiana HOM05D030319 ORTHO05D024879 1.2e-82 310.5 182 90.1
QL12p000905 Quercus lobata HOM05D030319 ORTHO05D024879 9.0e-35 151.4 233 39.1
Lsat_1_v5_gn_2_38441 Lactuca sativa HOM05D002687 ORTHO05D002052 9.7e-13 78.2 156 32.1
HanXRQChr12g0382031 Helianthus annuus HOM05D002687 ORTHO05D002052 4.8e-12 75.9 156 30.8
ECA238G0184 Erigeron canadensis HOM05D002687 ORTHO05D002052 6.3e-12 75.5 163 34.4
Lsat_1_v5_gn_3_114060 Lactuca sativa HOM05D002687 ORTHO05D002052 6.3e-12 75.5 157 31.2
Cfa009948 Carpinus fangiana HOM05D002687 ORTHO05D002052 9.0e-11 71.6 165 32.7
HanXRQChr13g0420231 Helianthus annuus HOM05D002687 ORTHO05D002052 9.0e-11 71.6 156 29.5
Sabra16G0125800 Salix brachista HOM05D002687 ORTHO05D002052 1.5e-10 70.9 162 32.1
CiPaw.13G131000 Carya illinoinensis HOM05D002687 ORTHO05D002052 2.6e-10 70.1 217 30.4
Prupe.6G142400 Prunus persica HOM05D002687 ORTHO05D002052 3.4e-10 69.7 157 30.6
MBI01_g04539_MAGBIO Magnolia biondii HOM05D002687 ORTHO05D002052 4.5e-10 69.3 205 28.8
TAR633G0472 Trochodendron aralioides HOM05D002687 ORTHO05D002052 7.7e-10 68.6 197 29.4
BraA04t17653Z Brassica rapa HOM05D002687 ORTHO05D002052 1.0e-09 68.2 161 28.6
Potri.006G204000 Populus trichocarpa HOM05D008136 ORTHO05D002052 1.3e-09 67.8 163 28.8
BcaC02g08259 Brassica carinata HOM05D002687 ORTHO05D002052 2.9e-09 66.6 159 28.3
C04p56620 Brassica napus HOM05D002687 ORTHO05D002052 2.9e-09 66.6 159 28.3
BolC4t27189H Brassica oleracea HOM05D002687 ORTHO05D002052 2.9e-09 66.6 159 28.3
Rhsim03G0065900 Rhododendron simsii HOM05D008136 ORTHO05D002052 2.9e-09 66.6 161 29.8
Cfa016687 Carpinus fangiana HOM05D008136 ORTHO05D002052 5.0e-09 65.9 166 28.3
HanXRQChr14g0432161 Helianthus annuus HOM05D002687 ORTHO05D002052 5.0e-09 65.9 164 29.9
Medtr4g051652 Medicago truncatula HOM05D002687 ORTHO05D002052 5.0e-09 65.9 192 29.2
Actinidia07275 Actinidia chinensis HOM05D002687 ORTHO05D002052 6.5e-09 65.5 163 28.8
CDE04G2921 Ceratophyllum demersum HOM05D002687 ORTHO05D002052 6.5e-09 65.5 164 28.7
Hma1.2p1_0097F.1_g048090 Hydrangea macrophylla HOM05D002687 ORTHO05D002052 6.5e-09 65.5 160 31.2
A04p20800 Brassica napus HOM05D002687 ORTHO05D002052 8.5e-09 65.1 161 28.0
RcHm_v2.0_Chr5g0073621 Rosa chinensis HOM05D010052 ORTHO05D010666 1.1e-08 64.7 218 27.5
QL07p036935 Quercus lobata HOM05D002687 ORTHO05D002052 1.4e-08 64.3 162 28.4
TAR369G0448 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.4e-08 64.3 162 30.2
BcaB06g28135 Brassica carinata HOM05D002687 ORTHO05D002052 3.2e-08 63.2 159 26.4
Cfa016686 Carpinus fangiana HOM05D002687 ORTHO05D002052 4.2e-08 62.8 163 28.8
CDE12G0475 Ceratophyllum demersum HOM05D000139 ORTHO05D000103 5.5e-08 62.4 200 24.0
CARHR119770 Cardamine hirsuta HOM05D002687 ORTHO05D002052 1.2e-07 61.2 159 26.4
Nn2g14283 Nelumbo nucifera HOM05D002687 ORTHO05D002052 1.2e-07 61.2 162 27.8
SalBow3G2018 Salvia bowleyana HOM05D002687 ORTHO05D002052 1.6e-07 60.8 162 27.8
BcaB02g10079 Brassica carinata HOM05D002687 ORTHO05D002052 2.1e-07 60.5 155 26.5
PSO339G2661 Papaver somniferum HOM05D002687 ORTHO05D002052 2.1e-07 60.5 203 26.6
SGA_v2.0_scaffold637G53306 Striga asiatica HOM05D002687 ORTHO05D002052 2.1e-07 60.5 162 29.6
Actinidia32046 Actinidia chinensis HOM05D000182 ORTHO05D000112 3.6e-07 59.7 151 28.5
Cpa.g.sc1142.1 Carica papaya HOM05D002687 ORTHO05D002052 3.6e-07 59.7 160 26.2
Haze_19713 Corylus avellana HOM05D008136 ORTHO05D002052 3.6e-07 59.7 166 27.7
PSO384G1068 Papaver somniferum HOM05D002687 ORTHO05D002052 4.6e-07 59.3 157 28.7
Carub.0001s0701 Capsella rubella HOM05D002687 ORTHO05D002052 6.1e-07 58.9 185 25.9
MD12G1038800 Malus domestica HOM05D002687 ORTHO05D002052 7.9e-07 58.5 157 29.9
Potri.009G019800 Populus trichocarpa HOM05D002687 ORTHO05D002052 1.0e-06 58.2 162 29.6
BcaC06g32916 Brassica carinata HOM05D008136 ORTHO05D002052 1.8e-06 57.4 219 25.6
COL.COLO4_29586 Corchorus olitorius HOM05D008136 ORTHO05D002052 1.8e-06 57.4 156 27.6
A09p45540 Brassica napus HOM05D008136 ORTHO05D002052 2.3e-06 57.0 222 26.6
BraA09t40016Z Brassica rapa HOM05D008136 ORTHO05D002052 2.3e-06 57.0 222 26.6
Oeu035584.1 Olea europaea HOM05D002687 ORTHO05D002052 2.3e-06 57.0 164 29.9
Prupe.7G048100 Prunus persica HOM05D010052 ORTHO05D010666 2.3e-06 57.0 224 24.1
Sp5g09840 Schrenkiella parvula HOM05D008136 ORTHO05D002052 2.3e-06 57.0 217 29.0
TPR.G19617 Trifolium pratense HOM05D000980 ORTHO05D000649 2.3e-06 57.0 150 28.7
Psat1g209680 Pisum sativum HOM05D000733 ORTHO05D000649 3.9e-06 56.2 138 29.7
QL01p011302 Quercus lobata HOM05D002687 ORTHO05D002052 3.9e-06 56.2 164 28.0
Thhalv10010982m.g Eutrema salsugineum HOM05D008136 ORTHO05D002052 8.8e-06 55.1 222 27.0


User provided reference genes

Program Settings