Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 3.4e-305 1050.8 521 100.0
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 3.4e-297 1024.2 521 97.1
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 3.4e-236 821.6 515 79.8
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 7.3e-223 777.3 504 78.8
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 8.4e-203 710.7 514 69.8
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 8.1e-198 694.1 515 68.2
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 3.2e-194 682.2 515 68.0
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 2.1e-193 679.5 516 66.1
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 4.3e-191 671.8 517 64.4
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 9.6e-191 670.6 517 66.5
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-190 670.2 517 66.5
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 3.6e-190 668.7 516 63.4
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 2.4e-189 666.0 517 66.5
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 4.0e-189 665.2 517 66.2
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 4.0e-189 665.2 517 66.2
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 9.0e-189 664.1 510 65.5
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 2.2e-187 659.4 516 63.0
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 2.9e-187 659.1 510 65.1
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.9e-186 656.4 516 63.0
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 9.3e-186 654.1 516 64.5
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 1.6e-185 653.3 510 64.5
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 1.3e-184 650.2 514 63.8
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 6.7e-184 647.9 517 63.8
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 3.3e-183 645.6 520 64.4
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 2.2e-179 632.9 491 66.0
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 2.9e-179 632.5 493 65.5
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 2.9e-179 632.5 518 62.2
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 3.5e-177 625.5 493 65.1
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 3.0e-176 622.5 515 61.4
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 1.3e-174 617.1 517 61.5
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 1.6e-174 616.7 497 64.8
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 3.4e-172 609.0 438 66.4
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 8.4e-171 604.4 494 64.4
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 1.9e-170 603.2 518 60.4
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 1.9e-170 603.2 511 58.5
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 7.1e-170 601.3 519 61.1
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 3.9e-168 595.5 515 60.0
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 6.7e-168 594.7 495 63.4
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 3.3e-167 592.4 511 60.1
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 9.7e-167 590.9 517 58.8
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 2.2e-166 589.7 518 59.3
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 1.8e-165 586.6 538 56.7
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 1.5e-164 583.6 492 60.0
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 5.9e-164 581.6 513 57.3
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 2.9e-163 579.3 515 58.1
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 3.8e-163 578.9 492 62.0
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 6.5e-163 578.2 525 58.5
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 6.5e-163 578.2 518 57.7
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 1.4e-162 577.0 520 60.0
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 2.5e-162 576.2 492 61.6
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 7.2e-162 574.7 513 56.1
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 9.4e-162 574.3 513 57.3
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 1.2e-161 573.9 513 59.3
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 2.7e-161 572.8 518 57.5
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 2.3e-160 569.7 513 56.9
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 2.0e-159 566.6 516 56.8
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 1.7e-158 563.5 512 57.8
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 2.8e-158 562.8 519 57.6
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 4.8e-158 562.0 515 54.8
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 4.1e-157 558.9 515 57.5
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 2.0e-156 556.6 515 53.4
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 5.5e-154 548.5 511 57.1
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.2e-153 547.4 488 59.0
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 2.1e-153 546.6 515 55.9
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 2.1e-153 546.6 494 58.3
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 2.7e-153 546.2 520 55.4
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 4.7e-153 545.4 516 55.6
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 6.1e-153 545.0 520 55.8
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 7.9e-153 544.7 496 58.1
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 6.7e-152 541.6 516 55.8
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 6.7e-152 541.6 491 56.8
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 8.8e-152 541.2 515 56.1
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 2.6e-151 539.7 517 55.3
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 9.7e-151 537.7 517 55.7
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-150 537.3 494 57.1
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 1.7e-150 537.0 519 55.1
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 1.4e-149 533.9 517 55.5
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 1.8e-149 533.5 514 55.1
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 5.3e-149 531.9 517 55.3
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 2.0e-148 530.0 515 55.9
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 3.5e-148 529.3 494 57.1
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 5.0e-147 525.4 494 57.1
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 1.9e-146 523.5 514 55.6
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 2.7e-145 519.6 492 55.9
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 6.1e-145 518.5 492 56.1
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 3.7e-142 509.2 513 53.2
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.1e-141 507.7 395 63.8
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 8.5e-139 498.0 523 51.1
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 8.5e-139 498.0 523 53.5
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 2.7e-137 493.0 514 49.4
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 1.0e-136 491.1 505 53.5
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 6.5e-131 471.9 463 56.4
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 2.7e-129 466.5 513 49.3
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 1.6e-124 450.7 398 58.3
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 2.0e-124 450.3 500 48.8
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 2.1e-121 440.3 344 61.9
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 1.4e-117 427.6 495 47.9
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 1.5e-111 407.5 524 45.0
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 4.9e-110 402.5 393 53.9
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 2.6e-103 380.2 270 68.5
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 4.0e-96 356.3 335 53.1
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 1.7e-94 350.9 327 58.1
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 5.2e-88 329.3 347 50.4
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 1.5e-79 301.2 198 72.7
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 1.5e-79 301.2 198 72.7
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 9.0e-72 275.4 219 62.6
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 2.4e-69 267.3 540 32.0
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 1.6e-68 264.6 531 34.3
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 8.1e-65 252.3 490 34.7
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 1.0e-59 235.3 162 66.0
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 7.2e-53 212.6 531 29.2
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 8.7e-51 205.7 196 59.2
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 4.8e-41 173.3 490 28.8
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 5.3e-40 169.9 173 57.8
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 4.5e-31 140.2 115 60.0
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 1.0e-30 139.0 116 61.2
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 3.2e-29 134.0 142 48.6
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 5.5e-29 133.3 115 55.7
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 3.6e-28 130.6 172 38.4
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 3.6e-28 130.6 142 47.9
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 7.7e-23 112.8 116 55.2
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.5e-21 108.6 122 46.7
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 6.8e-19 99.8 289 28.7
Actinidia33399 Actinidia chinensis HOM05D006455 ORTHO05D008098 2.8e-09 67.8 41 68.3


User provided reference genes

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