Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 9.9e-102 374.0 277 100.0
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 1.3e-88 330.5 277 93.9
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 3.9e-82 308.9 277 90.3
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 1.4e-52 210.7 270 77.8
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 6.1e-43 178.7 259 73.4
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 1.5e-41 174.1 262 72.1
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 4.8e-40 169.1 275 68.4
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 8.2e-40 168.3 268 69.0
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 9.1e-39 164.9 259 70.7
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 2.6e-38 163.3 272 66.9
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 1.0e-37 161.4 259 69.1
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 6.5e-37 158.7 281 63.7
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 6.5e-37 158.7 271 67.2
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 2.5e-36 156.8 256 69.5
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 2.5e-36 156.8 207 82.1
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 3.2e-36 156.4 275 65.8
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 2.1e-35 153.7 261 67.8
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 4.7e-35 152.5 276 64.9
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 4.7e-35 152.5 270 65.6
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 1.0e-34 151.4 272 66.9
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 2.3e-34 150.2 275 64.4
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 5.2e-34 149.1 271 66.1
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 8.8e-34 148.3 269 64.7
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 8.8e-34 148.3 306 59.5
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 5.7e-33 145.6 271 64.6
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 7.5e-33 145.2 264 65.2
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 2.2e-32 143.7 267 63.7
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 3.7e-32 142.9 275 62.9
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 6.3e-32 142.1 256 67.2
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 1.1e-31 141.4 260 64.2
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.8e-31 140.6 256 66.8
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.8e-31 140.6 260 66.5
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 2.4e-31 140.2 267 64.0
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 5.3e-31 139.0 271 63.1
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 9.1e-31 138.3 260 66.2
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 2.7e-30 136.7 268 65.3
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.7e-30 136.7 256 66.0
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 2.7e-30 136.7 284 61.6
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 3.5e-30 136.3 260 63.5
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 3.5e-30 136.3 260 65.8
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 5.9e-30 135.6 256 66.0
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 1.3e-29 134.4 271 63.5
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 1.7e-29 134.0 274 61.3
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 2.9e-29 133.3 282 50.4
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.9e-29 133.3 272 61.4
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.1e-28 131.3 256 65.6
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 1.1e-28 131.3 272 62.1
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 1.5e-28 131.0 274 60.6
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 3.2e-28 129.8 269 61.7
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 7.2e-28 128.6 270 59.6
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 3.6e-27 126.3 280 58.2
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 3.6e-27 126.3 280 58.2
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 1.0e-26 124.8 260 60.4
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 1.4e-26 124.4 289 59.9
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 1.4e-26 124.4 258 62.0
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 1.4e-26 124.4 285 60.4
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 2.3e-26 123.6 276 62.3
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 3.0e-26 123.2 274 57.7
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 8.8e-26 121.7 264 62.9
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 8.8e-26 121.7 225 69.3
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 2.0e-25 120.6 311 55.0
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 2.6e-25 120.2 231 63.6
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 2.6e-25 120.2 262 63.0
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 4.4e-25 119.4 271 57.2
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 9.8e-25 118.2 204 71.1
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 1.3e-24 117.9 313 56.5
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 3.7e-24 116.3 221 52.9
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 8.3e-24 115.2 267 59.2
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 8.3e-24 115.2 267 59.2
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 2.4e-23 113.6 261 60.9
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 2.4e-23 113.6 261 60.9
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 2.4e-23 113.6 278 59.7
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 4.1e-23 112.8 260 60.0
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 1.2e-22 111.3 273 57.5
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 1.2e-22 111.3 385 47.0
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 3.5e-22 109.8 260 59.6
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 4.5e-22 109.4 261 60.2
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 4.5e-22 109.4 261 59.4
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 1.0e-21 108.2 95 62.1
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 1.3e-21 107.8 276 58.0
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 2.2e-21 107.1 89 65.2
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 2.2e-21 107.1 257 59.9
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 2.9e-21 106.7 287 57.1
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 2.9e-21 106.7 105 57.1
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 3.8e-21 106.3 96 60.4
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 5.0e-21 105.9 261 59.4
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 6.5e-21 105.5 256 60.5
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 8.5e-21 105.1 88 65.9
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 8.5e-21 105.1 92 62.0
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 8.5e-21 105.1 261 59.4
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 8.5e-21 105.1 255 61.6
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 4.2e-20 102.8 89 64.0
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 7.2e-20 102.1 233 61.8
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.1e-19 100.5 202 71.8
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 8.0e-19 98.6 273 46.5
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 1.4e-18 97.8 271 57.9
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 1.8e-18 97.4 275 58.5
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 1.3e-16 91.3 260 55.4
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 1.1e-15 88.2 100 47.0
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 4.1e-15 86.3 255 57.3
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 2.0e-14 84.0 89 55.1
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 2.0e-14 84.0 255 57.3
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 5.9e-14 82.4 287 53.7
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 7.7e-14 82.0 223 43.0
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 1.7e-13 80.9 89 53.9
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 3.8e-13 79.7 207 32.9
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 1.5e-12 77.8 88 47.7
Dinv28011 Davidia involucrata HOM05D006475 ORTHO05D007969 9.5e-12 75.1 105 50.5
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 2.1e-11 73.9 83 55.4
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 1.0e-10 71.6 263 50.6
Nitab4.5_0001175g0040 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.5e-09 67.8 195 49.2
COL.COLO4_12070 Corchorus olitorius HOM05D006475 ORTHO05D007969 2.2e-08 63.9 102 49.0
Sc07g0008230 Simmondsia chinensis HOM05D006475 ORTHO05D007969 2.2e-08 63.9 200 59.0
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 3.7e-08 63.2 34 82.4
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 4.9e-08 62.8 285 51.9
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 1.2e-06 58.2 71 40.8
Gohir.D08G138080 Gossypium hirsutum HOM05D006475 ORTHO05D007969 2.0e-06 57.4 34 79.4
Gorai.004G141500 Gossypium raimondii HOM05D006475 ORTHO05D007969 3.5e-06 56.6 34 79.4


User provided reference genes

Program Settings