Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08047 Corylus avellana HOM05D007357 ORTHO05D009314 8.9e-91 337.0 185 100.0
Cfa012604 Carpinus fangiana HOM05D007357 ORTHO05D009314 8.1e-76 287.3 212 78.8
Haze_08057 Corylus avellana HOM05D007357 ORTHO05D009314 1.4e-59 233.4 185 75.1
CiPaw.11G103400 Carya illinoinensis HOM05D007357 ORTHO05D009314 9.3e-56 220.7 165 75.2
QL02p024644 Quercus lobata HOM05D007357 ORTHO05D009314 4.1e-51 205.3 192 66.7
CsaV3_3G030320 Cucumis sativus L. HOM05D007357 ORTHO05D009314 1.0e-49 200.7 198 62.1
Actinidia14748 Actinidia chinensis HOM05D007357 ORTHO05D009314 3.0e-46 189.1 195 58.5
CSS0024010 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 5.1e-46 188.3 196 58.7
Sed0001819 Sechium edule HOM05D007357 ORTHO05D009314 1.5e-45 186.8 200 59.0
Prupe.5G019800 Prunus persica HOM05D007357 ORTHO05D009314 5.7e-45 184.9 192 58.3
ClCG07G002370 Citrullus lanatus HOM05D007357 ORTHO05D009314 3.7e-44 182.2 198 57.6
MELO3C022754.2 Cucumis melo HOM05D007357 ORTHO05D009314 5.9e-42 174.9 198 56.1
MD06G1015900 Malus domestica HOM05D007357 ORTHO05D009314 7.7e-42 174.5 193 55.4
RcHm_v2.0_Chr7g0213521 Rosa chinensis HOM05D007357 ORTHO05D009314 8.5e-41 171.0 124 71.8
FvH4_5g24040 Fragaria vesca HOM05D007357 ORTHO05D009314 1.1e-40 170.6 123 72.4
FAN18G2492 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.1e-40 170.6 123 72.4
FAN18G4511 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.1e-40 170.6 123 72.4
Rhsim07G0138300 Rhododendron simsii HOM05D007357 ORTHO05D009314 1.4e-40 170.2 193 52.8
TAR629G3058 Trochodendron aralioides HOM05D007357 ORTHO05D009314 1.9e-40 169.9 193 54.4
arahy.Tifrunner.gnm1.ann1.0Q5JCD Arachis hypogaea HOM05D007357 ORTHO05D009314 4.2e-40 168.7 191 55.5
arahy.Tifrunner.gnm1.ann1.JPN6B0 Arachis hypogaea HOM05D007357 ORTHO05D009314 4.2e-40 168.7 191 55.5
Gohir.D12G206000 Gossypium hirsutum HOM05D007357 ORTHO05D009314 5.5e-40 168.3 196 54.6
VMungo1215G1709 Vigna mungo HOM05D007357 ORTHO05D009314 5.5e-40 168.3 185 56.8
FAN08G0560 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.2e-39 167.2 123 70.7
Gohir.A12G203400 Gossypium hirsutum HOM05D007357 ORTHO05D009314 2.1e-39 166.4 195 54.4
Gorai.008G220900 Gossypium raimondii HOM05D007357 ORTHO05D009314 2.1e-39 166.4 195 54.9
FvH4_3g08760 Fragaria vesca HOM05D007357 ORTHO05D009314 1.4e-38 163.7 123 69.1
Sed0016962 Sechium edule HOM05D007357 ORTHO05D009314 2.3e-38 162.9 197 53.3
Phvul.002G128100 Phaseolus vulgaris HOM05D007357 ORTHO05D009314 3.9e-38 162.2 192 52.1
Cc08_g05250 Coffea canephora HOM05D007357 ORTHO05D009314 1.1e-37 160.6 211 46.9
Nitab4.5_0001033g0080 Nicotiana tabacum HOM05D007357 ORTHO05D009314 1.1e-37 160.6 204 49.0
Nn4g25471 Nelumbo nucifera HOM05D007357 ORTHO05D009314 2.6e-37 159.5 192 49.5
COL.COLO4_16848 Corchorus olitorius HOM05D007357 ORTHO05D009314 9.7e-37 157.5 186 51.6
TWI34G1422 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 2.8e-36 156.0 191 51.3
Cpa.g.sc223.2 Carica papaya HOM05D007357 ORTHO05D009314 6.3e-36 154.8 196 52.6
PGSC0003DMG400030879 Solanum tuberosum HOM05D007357 ORTHO05D009314 1.1e-35 154.1 202 48.5
Peaxi162Scf00408g00712 Petunia axillaris HOM05D007357 ORTHO05D009314 9.1e-35 151.0 208 46.6
Sopen08g024580 Solanum pennellii HOM05D007357 ORTHO05D009314 9.1e-35 151.0 202 48.0
Migut.A00548 Erythranthe guttata HOM05D007357 ORTHO05D009314 1.5e-34 150.2 215 43.7
CANSAT21G2249 Cannabis sativa HOM05D007357 ORTHO05D009314 2.0e-34 149.8 184 53.3
Potri.001G132232 Populus trichocarpa HOM05D007357 ORTHO05D009314 2.0e-34 149.8 192 51.0
TWI34G1682 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 2.6e-34 149.4 191 50.8
Manes.17G008100 Manihot esculenta HOM05D007357 ORTHO05D009314 4.5e-34 148.7 188 52.7
Ah.07g201200 Amaranthus hybridus HOM05D007357 ORTHO05D009314 1.0e-33 147.5 196 49.0
Glyma.01G150100 Glycine max HOM05D007357 ORTHO05D009314 1.7e-33 146.7 191 52.4
Ciclev10002529m.g Citrus clementina HOM05D007357 ORTHO05D009314 3.8e-33 145.6 124 64.5
CSS0046502 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 5.0e-33 145.2 167 55.1
Lj2g0006468 Lotus japonicus HOM05D007357 ORTHO05D009314 8.5e-33 144.4 194 50.0
CAN.G1269.3 Capsicum annuum HOM05D007357 ORTHO05D009314 1.4e-32 143.7 151 55.0
AUR62027337 Chenopodium quinoa HOM05D007357 ORTHO05D009314 4.2e-32 142.1 122 59.0
AUR62007392 Chenopodium quinoa HOM05D007357 ORTHO05D009314 5.5e-32 141.7 130 56.2
ECA246G3443 Erigeron canadensis HOM05D007357 ORTHO05D009314 7.2e-32 141.4 188 47.3
AUR62044266 Chenopodium quinoa HOM05D007357 ORTHO05D009314 2.7e-31 139.4 154 50.6
Sc07g0008390 Simmondsia chinensis HOM05D007357 ORTHO05D009314 2.7e-31 139.4 125 60.0
Medtr5g026790 Medicago truncatula HOM05D007357 ORTHO05D009314 4.7e-31 138.7 196 49.0
Oeu059314.1 Olea europaea HOM05D007357 ORTHO05D009314 1.4e-30 137.1 236 43.6
HanXRQChr17g0539311 Helianthus annuus HOM05D007357 ORTHO05D009314 2.3e-30 136.3 199 43.7
Lalb_Chr05g0215411 Lupinus albus HOM05D007357 ORTHO05D009314 6.7e-30 134.8 191 49.7
PSO063G0202 Papaver somniferum HOM05D007357 ORTHO05D009314 3.3e-29 132.5 120 56.7
HPP92_025510 Vanilla planifolia HOM05D007357 ORTHO05D009314 5.7e-29 131.7 189 44.4
Lsat_1_v5_gn_3_28060 Lactuca sativa HOM05D007357 ORTHO05D009314 7.4e-29 131.3 191 44.0
MD06G1016600 Malus domestica HOM05D007357 ORTHO05D009314 2.8e-28 129.4 180 48.3
ATR0829G081 Amborella trichopoda HOM05D007357 ORTHO05D009314 3.7e-28 129.0 122 53.3
unitig_32.g10966 Utricularia gibba HOM05D007357 ORTHO05D009314 3.7e-28 129.0 207 41.5
Psat2g142360 Pisum sativum HOM05D007357 ORTHO05D009314 4.8e-28 128.6 194 47.9
HPP92_025525 Vanilla planifolia HOM05D007357 ORTHO05D009314 4.8e-28 128.6 189 43.4
Eucgr.D02601 Eucalyptus grandis HOM05D007357 ORTHO05D009314 6.3e-28 128.3 125 55.2
Duzib068G0657 Durio zibethinus HOM05D007357 ORTHO05D009314 2.4e-27 126.3 164 52.4
DCAR_008186 Daucus carota HOM05D007357 ORTHO05D009314 5.3e-27 125.2 204 42.6
vmacro13970 Vaccinium macrocarpon HOM05D007357 ORTHO05D009314 9.1e-27 124.4 223 39.9
Aqoxy5G03983 Aquilegia oxysepala HOM05D007357 ORTHO05D009314 5.9e-26 121.7 158 45.6
Hma1.2p1_1179F.1_g264570 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 3.8e-25 119.0 175 46.3
Solyc08g075930.4 Solanum lycopersicum HOM05D007357 ORTHO05D009314 6.5e-25 118.2 172 46.5
Oeu042216.1 Olea europaea HOM05D007357 ORTHO05D009314 1.1e-24 117.5 222 40.5
CDE12G0114 Ceratophyllum demersum HOM05D007357 ORTHO05D009314 3.2e-24 115.9 188 39.9
EL10Ac5g11952 Beta vulgaris HOM05D000153 ORTHO05D000118 7.2e-24 114.8 81 74.1
ECA240G0146 Erigeron canadensis HOM05D007357 ORTHO05D009314 1.6e-23 113.6 193 42.5
Glyma.09G214200 Glycine max HOM05D007357 ORTHO05D009314 2.7e-23 112.8 186 43.0
Os07g0452600 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 8.0e-23 111.3 162 43.8
arahy.Tifrunner.gnm1.ann1.L1IIZH Arachis hypogaea HOM05D007357 ORTHO05D009314 1.0e-22 110.9 159 47.8
SGA_v2.0_scaffold89G27413 Striga asiatica HOM05D003343 ORTHO05D003787 3.0e-22 109.4 169 44.4
Zm00001eb096560 Zea mays HOM05D007357 ORTHO05D009314 5.2e-22 108.6 178 39.9
TPR.G17258 Trifolium pratense HOM05D007357 ORTHO05D009314 1.7e-20 103.6 185 41.6
Thecc.03G316500 Theobroma cacao HOM05D007357 ORTHO05D009314 2.2e-20 103.2 133 51.9
FAN11G2380 Fragaria x ananassa HOM05D007357 ORTHO05D009314 3.7e-20 102.4 77 67.5
Hund11140 Selenicereus undatus HOM05D007357 ORTHO05D009314 4.8e-20 102.1 135 47.4
TWI79G1144 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 6.3e-20 101.7 162 45.7
PSO782G0982 Papaver somniferum HOM05D007357 ORTHO05D009314 1.4e-19 100.5 92 57.6
Sabra01G0102000 Salix brachista HOM05D007357 ORTHO05D009314 7.0e-19 98.2 78 62.8
Nitab4.5_0001786g0050 Nicotiana tabacum HOM05D007357 ORTHO05D009314 2.7e-18 96.3 187 41.2
Os08g0180400 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 9.4e-16 87.8 77 54.5
Ca_25098_v3 Cicer arietinum L. HOM05D007357 ORTHO05D009314 2.1e-15 86.7 166 43.4
CSS0020054 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 8.8e-14 81.3 58 77.6
CSS0037866 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 3.4e-13 79.3 58 75.9
MD06G1016300 Malus domestica HOM05D007357 ORTHO05D009314 4.4e-13 79.0 59 71.2
Zm00001eb171770 Zea mays HOM05D007357 ORTHO05D009314 4.1e-11 72.4 133 33.8
arahy.Tifrunner.gnm1.ann1.F5EPY8 Arachis hypogaea HOM05D007357 ORTHO05D009314 7.0e-11 71.6 50 74.0
Hma1.2p1_0784F.1_g217055 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 1.3e-09 67.4 83 48.2
Hma1.2p1_0944F.1_g240000 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 1.3e-09 67.4 83 48.2
Nitab4.5_0018136g0010 Nicotiana tabacum HOM05D007357 ORTHO05D009314 4.2e-08 62.4 63 47.6
Oeu059300.1 Olea europaea HOM05D007357 ORTHO05D009314 1.2e-07 60.8 63 57.1
Hma1.2p1_0784F.1_g217060 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 8.8e-06 54.7 39 71.8
Hma1.2p1_0944F.1_g240015 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 8.8e-06 54.7 39 71.8


User provided reference genes

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