Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 5.7e-133 477.6 247 100.0
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 1.6e-132 476.1 247 99.6
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 1.2e-122 443.4 250 93.2
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 5.5e-80 301.6 268 64.6
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 4.9e-76 288.5 267 62.9
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 2.4e-75 286.2 272 59.2
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 3.3e-72 275.8 274 55.1
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 7.3e-72 274.6 271 60.1
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 7.3e-72 274.6 271 60.1
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 1.2e-71 273.9 270 55.9
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 1.6e-71 273.5 272 57.4
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.6e-71 273.5 266 59.8
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.6e-71 273.5 270 55.9
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 2.1e-71 273.1 257 62.3
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 2.8e-71 272.7 270 60.0
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 3.6e-71 272.3 270 54.4
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 3.6e-71 272.3 272 56.6
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 5.2e-70 268.5 271 59.0
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 1.2e-69 267.3 263 58.9
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 3.4e-69 265.8 266 59.0
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 2.2e-68 263.1 257 60.3
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 6.4e-68 261.5 275 57.5
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 2.4e-67 259.6 197 71.1
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 7.0e-67 258.1 260 58.5
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 7.0e-67 258.1 265 54.7
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 2.0e-66 256.5 254 59.4
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 1.0e-65 254.2 272 51.5
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 6.6e-65 251.5 268 55.2
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 2.8e-63 246.1 261 55.2
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 4.7e-63 245.4 257 53.3
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 3.1e-62 242.7 274 51.1
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 4.0e-62 242.3 273 55.7
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 1.3e-60 237.3 265 52.5
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 2.2e-60 236.5 273 51.6
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 3.7e-60 235.7 259 55.2
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 6.4e-60 235.0 263 52.5
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 8.3e-60 234.6 259 52.1
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 1.4e-59 233.8 257 54.5
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 3.2e-59 232.6 264 53.4
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 3.9e-57 225.7 264 48.9
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 8.6e-57 224.6 268 48.5
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 2.5e-56 223.0 250 54.0
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 4.3e-56 222.2 225 59.6
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 5.6e-56 221.9 235 54.9
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 5.2e-54 215.3 262 50.0
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 6.8e-54 214.9 261 49.4
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 2.0e-53 213.4 264 48.1
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 2.6e-53 213.0 261 50.2
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 9.9e-53 211.1 265 47.9
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 1.3e-52 210.7 255 49.8
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 8.4e-52 208.0 272 46.3
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 4.1e-51 205.7 243 51.4
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 5.4e-51 205.3 265 44.9
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 2.3e-49 199.9 272 44.9
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 6.6e-49 198.4 257 47.5
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 8.6e-49 198.0 259 46.7
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 1.1e-48 197.6 265 47.5
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 1.1e-48 197.6 257 46.7
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 7.3e-48 194.9 264 46.2
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 6.2e-47 191.8 257 47.5
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 6.2e-47 191.8 235 49.4
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 6.2e-47 191.8 257 45.9
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 1.1e-46 191.0 261 46.7
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 1.4e-46 190.7 256 46.9
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 1.4e-46 190.7 263 45.6
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 1.2e-45 187.6 266 44.7
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 4.4e-45 185.7 266 44.7
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 7.6e-45 184.9 250 46.8
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 9.9e-45 184.5 268 44.8
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 9.9e-45 184.5 266 45.1
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 2.2e-44 183.3 241 48.1
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 2.2e-44 183.3 241 48.1
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 1.1e-43 181.0 234 47.9
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 1.4e-43 180.6 205 52.2
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 5.4e-43 178.7 263 44.1
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 7.1e-43 178.3 267 44.2
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 1.6e-42 177.2 270 43.7
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 1.7e-41 173.7 205 52.7
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 2.3e-41 173.3 261 45.2
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 2.8e-39 166.4 208 49.5
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 9.9e-37 157.9 257 38.1
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 2.2e-36 156.8 279 39.4
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 2.9e-36 156.4 255 43.5
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 1.3e-31 141.0 142 53.5
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 1.7e-28 130.6 237 38.4
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 4.6e-26 122.5 263 33.5
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 7.9e-26 121.7 236 39.0
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 1.5e-24 117.5 251 33.9
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 1.9e-24 117.1 253 32.8
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 3.3e-24 116.3 241 35.7
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 9.6e-24 114.8 239 35.1
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 2.1e-23 113.6 253 34.4
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 2.1e-23 113.6 253 34.4
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 2.1e-23 113.6 253 34.4
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 1.4e-22 110.9 238 36.1
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 2.4e-22 110.2 238 36.1
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 2.4e-22 110.2 241 36.1
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 4.0e-22 109.4 126 48.4
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 6.9e-22 108.6 106 53.8
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.5e-21 107.5 106 53.8
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 1.0e-20 104.8 251 34.3
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 1.3e-20 104.4 239 33.9
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 4.9e-20 102.4 109 50.5
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 1.1e-19 101.3 128 48.4
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 3.2e-19 99.8 213 35.7
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 7.9e-18 95.1 242 30.6
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 4.8e-15 85.9 232 30.2
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 2.4e-14 83.6 56 76.8
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 4.1e-14 82.8 251 28.3
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 1.2e-13 81.3 169 36.7
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 5.5e-11 72.4 236 28.8
MD16G1286500 Malus domestica HOM05D006619 ORTHO05D008351 3.9e-09 66.2 132 39.4
HanXRQChr04g0096591 Helianthus annuus HOM05D006619 ORTHO05D008351 9.7e-08 61.6 118 35.6
COL.COLO4_08066 Corchorus olitorius HOM05D004199 ORTHO05D025158 1.6e-07 60.8 125 40.0


User provided reference genes

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