Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07993 Corylus avellana HOM05D000595 ORTHO05D004141 2.4e-121 438.7 207 100.0
Cfa012657 Carpinus fangiana HOM05D000595 ORTHO05D004141 1.8e-95 352.8 171 97.1
QL02p060306 Quercus lobata HOM05D000595 ORTHO05D004141 8.2e-85 317.4 169 88.2
CiPaw.11G104000 Carya illinoinensis HOM05D000595 ORTHO05D004141 1.1e-81 307.0 166 86.1
Thecc.03G325300 Theobroma cacao HOM05D000595 ORTHO05D004141 2.7e-80 302.4 173 78.6
CANSAT21G1418 Cannabis sativa HOM05D000595 ORTHO05D004141 1.0e-79 300.4 172 78.5
COL.COLO4_24689 Corchorus olitorius HOM05D000595 ORTHO05D004141 1.4e-79 300.1 171 79.5
Duzib116G0431 Durio zibethinus HOM05D000595 ORTHO05D004141 1.4e-79 300.1 171 78.9
Atru.chr6.1509 Acer truncatum HOM05D000595 ORTHO05D004141 3.0e-79 298.9 172 80.2
Ciclev10000404m.g Citrus clementina HOM05D000595 ORTHO05D004141 6.7e-79 297.7 172 79.7
Ciclev10000152m.g Citrus clementina HOM05D000595 ORTHO05D004141 2.0e-78 296.2 172 79.7
MD00G1148100 Malus domestica HOM05D000595 ORTHO05D004141 2.6e-78 295.8 172 77.9
Prupe.5G018900 Prunus persica HOM05D000595 ORTHO05D004141 3.3e-78 295.4 172 78.5
Eucgr.E01212 Eucalyptus grandis HOM05D000595 ORTHO05D004141 4.4e-78 295.0 170 77.1
PGR042G2013 Punica granatum HOM05D000595 ORTHO05D004141 1.3e-77 293.5 172 76.2
QL02p060347 Quercus lobata HOM05D000595 ORTHO05D004141 4.8e-77 291.6 216 68.5
TWI60G0525 Tripterygium wilfordii HOM05D000595 ORTHO05D004141 4.8e-77 291.6 167 81.4
RcHm_v2.0_Chr7g0213851 Rosa chinensis HOM05D000595 ORTHO05D004141 8.2e-77 290.8 170 78.2
Duzib116G0855 Durio zibethinus HOM05D000595 ORTHO05D004141 1.4e-76 290.0 171 77.2
RcHm_v2.0_Chr7g0213921 Rosa chinensis HOM05D000595 ORTHO05D004141 1.4e-76 290.0 170 77.6
Eucgr.E01209 Eucalyptus grandis HOM05D000595 ORTHO05D004141 1.5e-75 286.6 170 75.3
Sabra01G0099900 Salix brachista HOM05D000595 ORTHO05D004141 1.5e-75 286.6 170 77.1
Ca_25085_v3 Cicer arietinum L. HOM05D000595 ORTHO05D004141 2.6e-75 285.8 172 76.7
FAN13G2264 Fragaria x ananassa HOM05D000595 ORTHO05D004141 2.6e-75 285.8 170 77.1
Gohir.D02G109400 Gossypium hirsutum HOM05D000595 ORTHO05D004141 2.6e-75 285.8 171 76.0
Nn1g02038 Nelumbo nucifera HOM05D000595 ORTHO05D004141 2.6e-75 285.8 173 77.5
Gorai.005G124100 Gossypium raimondii HOM05D000595 ORTHO05D004141 3.4e-75 285.4 171 76.0
Lalb_Chr09g0325191 Lupinus albus HOM05D000595 ORTHO05D004141 1.0e-74 283.9 170 78.2
FvH4_5g24150 Fragaria vesca HOM05D000595 ORTHO05D004141 1.3e-74 283.5 170 76.5
Lj8A330G11 Lonicera japonica HOM05D000595 ORTHO05D004141 1.7e-74 283.1 167 78.4
GSVIVG01022815001 Vitis vinifera HOM05D000595 ORTHO05D004141 1.7e-74 283.1 172 75.6
Gohir.A02G091200 Gossypium hirsutum HOM05D000595 ORTHO05D004141 2.9e-74 282.3 171 75.4
Lj2g0003822 Lotus japonicus HOM05D000595 ORTHO05D004141 3.8e-74 282.0 170 75.9
Cpa.g.sc71.50 Carica papaya HOM05D000595 ORTHO05D004141 5.0e-74 281.6 164 80.5
ClCG10G000900 Citrullus lanatus HOM05D000595 ORTHO05D004141 6.5e-74 281.2 168 77.4
TAR629G2634 Trochodendron aralioides HOM05D000595 ORTHO05D004141 8.5e-74 280.8 167 77.8
Potri.001G129600 Populus trichocarpa HOM05D000595 ORTHO05D004141 1.4e-73 280.0 167 77.2
TPR.G17247 Trifolium pratense HOM05D000595 ORTHO05D004141 4.2e-73 278.5 172 75.0
SalBow4G2071 Salvia bowleyana HOM05D000595 ORTHO05D004141 7.2e-73 277.7 172 72.7
Manes.15G187301 Manihot esculenta HOM05D000595 ORTHO05D004141 9.4e-73 277.3 167 76.6
arahy.Tifrunner.gnm1.ann1.BJDV4A Arachis hypogaea HOM05D000595 ORTHO05D004141 1.2e-72 276.9 172 75.6
arahy.Tifrunner.gnm1.ann1.NQH3GN Arachis hypogaea HOM05D000595 ORTHO05D004141 1.2e-72 276.9 172 75.6
Thhalv10019990m.g Eutrema salsugineum HOM05D000595 ORTHO05D004141 1.2e-72 276.9 172 74.4
HanXRQChr17g0537211 Helianthus annuus HOM05D000595 ORTHO05D004141 1.2e-72 276.9 170 72.4
Oeu042200.2 Olea europaea HOM05D000595 ORTHO05D004141 2.1e-72 276.2 167 74.9
AL3G38380 Arabidopsis lyrata HOM05D000595 ORTHO05D004141 6.1e-72 274.6 172 73.8
Aqoxy3G02180 Aquilegia oxysepala HOM05D000595 ORTHO05D004141 8.0e-72 274.2 171 74.3
vmacro00078 Vaccinium macrocarpon HOM05D000595 ORTHO05D004141 8.0e-72 274.2 167 75.4
Psat2g142760 Pisum sativum HOM05D000595 ORTHO05D004141 1.0e-71 273.9 172 73.8
A01p31400 Brassica napus HOM05D000595 ORTHO05D004141 1.8e-71 273.1 172 73.3
C01p39990 Brassica napus HOM05D000595 ORTHO05D004141 1.8e-71 273.1 172 73.3
Phvul.002G127000 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 3.0e-71 272.3 197 67.5
Oeu042195.1 Olea europaea HOM05D000595 ORTHO05D004141 3.9e-71 271.9 161 73.9
THA.LOC104822230 Tarenaya hassleriana HOM05D000595 ORTHO05D004141 3.9e-71 271.9 168 75.0
Nitab4.5_0000985g0070 Nicotiana tabacum HOM05D000595 ORTHO05D004141 8.8e-71 270.8 170 70.6
Sp3g21350 Schrenkiella parvula HOM05D000595 ORTHO05D004141 1.1e-70 270.4 172 71.5
TPR.G39643 Trifolium pratense HOM05D000595 ORTHO05D004141 1.1e-70 270.4 170 74.1
ECA246G1180 Erigeron canadensis HOM05D000595 ORTHO05D004141 2.0e-70 269.6 172 70.9
Lalb_Chr16g0380651 Lupinus albus HOM05D000595 ORTHO05D004141 2.0e-70 269.6 172 72.7
Medtr5g026610 Medicago truncatula HOM05D000595 ORTHO05D004141 2.0e-70 269.6 172 72.7
CSS0032199 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D004141 2.6e-70 269.2 161 74.5
VMungo1215G0102 Vigna mungo HOM05D000595 ORTHO05D004141 2.6e-70 269.2 160 77.5
PSO782G2105 Papaver somniferum HOM05D000595 ORTHO05D004141 3.3e-70 268.9 167 71.9
MELO3C013786.2 Cucumis melo HOM05D000595 ORTHO05D004141 4.4e-70 268.5 168 73.8
AT3G23640 Arabidopsis thaliana HOM05D000595 ORTHO05D004141 5.7e-70 268.1 172 72.1
Carub.0003s2390 Capsella rubella HOM05D000595 ORTHO05D004141 5.7e-70 268.1 167 74.9
CsaV3_3G000980 Cucumis sativus L. HOM05D000595 ORTHO05D004141 5.7e-70 268.1 168 73.8
Solyc08g075530.3 Solanum lycopersicum HOM05D000595 ORTHO05D004141 7.4e-70 267.7 170 70.6
Sopen08g024190 Solanum pennellii HOM05D000595 ORTHO05D004141 7.4e-70 267.7 170 70.6
MSTRG.24716 Avicennia marina HOM05D000595 ORTHO05D004141 1.3e-69 266.9 167 73.1
BcaB04g20429 Brassica carinata HOM05D000595 ORTHO05D004141 1.3e-69 266.9 172 72.1
Peaxi162Scf00053g00618 Petunia axillaris HOM05D000595 ORTHO05D004141 1.7e-69 266.5 167 71.3
Actinidia32782 Actinidia chinensis HOM05D000595 ORTHO05D004141 2.2e-69 266.2 161 75.2
Rhsim11G0034700 Rhododendron simsii HOM05D000595 ORTHO05D004141 2.8e-69 265.8 183 68.9
Sp3g21340 Schrenkiella parvula HOM05D000595 ORTHO05D004141 2.8e-69 265.8 170 72.9
Sed0017541 Sechium edule HOM05D000595 ORTHO05D004141 2.8e-69 265.8 170 71.8
Carub.0003s2391 Capsella rubella HOM05D000595 ORTHO05D004141 3.7e-69 265.4 167 72.5
DCAR_004519 Daucus carota HOM05D000595 ORTHO05D004141 6.3e-69 264.6 167 71.3
Psat2g142920 Pisum sativum HOM05D000595 ORTHO05D004141 6.3e-69 264.6 172 71.5
Migut.A00539 Erythranthe guttata HOM05D000595 ORTHO05D004141 8.2e-69 264.2 173 69.4
Sc07g0008260 Simmondsia chinensis HOM05D000595 ORTHO05D004141 1.1e-68 263.8 161 73.9
Lsat_1_v5_gn_3_23561 Lactuca sativa HOM05D000595 ORTHO05D004141 1.4e-68 263.5 170 70.6
Nitab4.5_0000030g0360 Nicotiana tabacum HOM05D000595 ORTHO05D004141 1.4e-68 263.5 163 71.2
Hund14328 Selenicereus undatus HOM05D000595 ORTHO05D004141 1.4e-68 263.5 161 73.9
BcaB04g20430 Brassica carinata HOM05D000595 ORTHO05D004141 7.0e-68 261.2 170 70.0
AUR62007422 Chenopodium quinoa HOM05D000595 ORTHO05D004141 1.2e-67 260.4 161 73.3
Glyma.04G123900 Glycine max HOM05D000595 ORTHO05D004141 1.2e-67 260.4 158 74.7
SGA_v2.0_scaffold111G31354 Striga asiatica HOM05D000595 ORTHO05D004141 2.6e-67 259.2 189 65.1
GSVIVG01036947001 Vitis vinifera HOM05D000595 ORTHO05D004141 4.5e-67 258.5 172 70.9
AUR62027310 Chenopodium quinoa HOM05D000595 ORTHO05D004141 2.9e-66 255.8 161 70.2
A01p31410 Brassica napus HOM05D000595 ORTHO05D004141 3.8e-66 255.4 170 68.8
BraA01t03266Z Brassica rapa HOM05D000595 ORTHO05D004141 5.0e-66 255.0 170 68.8
BolC1t03957H Brassica oleracea HOM05D000595 ORTHO05D004141 2.5e-65 252.7 171 68.4
ECA246G0927 Erigeron canadensis HOM05D000595 ORTHO05D004141 3.2e-65 252.3 163 65.0
Zm00001eb096920 Zea mays HOM05D000595 ORTHO05D004141 3.2e-65 252.3 168 70.8
HPP92_020874 Vanilla planifolia HOM05D000595 ORTHO05D004141 4.2e-65 251.9 170 68.2
CAN.G1731.4 Capsicum annuum HOM05D000595 ORTHO05D004141 5.5e-65 251.5 156 70.5
PSO384G3519 Papaver somniferum HOM05D000595 ORTHO05D004141 1.2e-64 250.4 170 67.1
PSO384G3949 Papaver somniferum HOM05D000595 ORTHO05D004141 1.6e-64 250.0 167 67.1
C01p40000 Brassica napus HOM05D000595 ORTHO05D004141 3.6e-64 248.8 166 68.7
Aa31LG10G5270 Aethionema arabicum HOM05D000595 ORTHO05D004141 8.0e-64 247.7 173 69.4
MBI04_g21145_MAGBIO Magnolia biondii HOM05D000595 ORTHO05D004141 8.0e-64 247.7 168 67.9
Zm00001eb305980 Zea mays HOM05D000595 ORTHO05D004141 8.0e-64 247.7 192 63.0
ATR0829G165 Amborella trichopoda HOM05D000595 ORTHO05D004141 2.3e-63 246.1 167 68.3
Migut.E01361 Erythranthe guttata HOM05D000595 ORTHO05D004141 3.0e-63 245.7 164 66.5
Os07g0420700 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 4.0e-63 245.4 168 70.2
EL10Ac5g11905 Beta vulgaris HOM05D000595 ORTHO05D004141 1.5e-62 243.4 161 67.1
DCAR_004520 Daucus carota HOM05D000595 ORTHO05D004141 1.3e-61 240.4 170 64.7
MBI04_g21144_MAGBIO Magnolia biondii HOM05D000595 ORTHO05D004141 5.9e-59 231.5 183 61.2
CDE01G0028 Ceratophyllum demersum HOM05D000595 ORTHO05D004141 1.0e-58 230.7 160 66.9
Cfa012656 Carpinus fangiana HOM05D000595 ORTHO05D004141 1.5e-57 226.9 120 88.3
Ciclev10011016m.g Citrus clementina HOM05D000595 ORTHO05D004141 9.4e-57 224.2 135 77.0
Dinv37419 Davidia involucrata HOM05D000595 ORTHO05D004141 2.1e-56 223.0 121 82.6
Pp3c4_24030 Physcomitrium patens HOM05D000595 ORTHO05D004141 3.3e-49 199.1 172 53.5
Os07g0421300 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 1.0e-47 194.1 194 51.5
TPR.G17274 Trifolium pratense HOM05D000595 ORTHO05D004141 4.4e-46 188.7 112 74.1
CARHR000110 Cardamine hirsuta HOM05D000595 ORTHO05D004141 5.7e-46 188.3 109 75.2
Pp3c16_2470 Physcomitrium patens HOM05D000595 ORTHO05D004141 7.5e-46 188.0 162 53.1
Pp3c3_9200 Physcomitrium patens HOM05D000595 ORTHO05D004141 1.8e-44 183.3 161 52.2
SMO116G0166 Selaginella moellendorffii HOM05D000595 ORTHO05D004141 1.2e-43 180.6 170 48.8
Pp3c13_11140 Physcomitrium patens HOM05D000595 ORTHO05D004141 2.0e-43 179.9 172 50.6
Mapoly0135s0001 Marchantia polymorpha HOM05D000595 ORTHO05D004141 7.8e-43 177.9 158 51.9
AagrBONN_evm.TU.Sc2ySwM_344.2687 Anthoceros agrestis HOM05D000595 ORTHO05D004141 1.0e-42 177.6 169 51.5
Pp3c5_4460 Physcomitrium patens HOM05D000595 ORTHO05D004141 1.3e-42 177.2 171 50.9
HPP92_024265 Vanilla planifolia HOM05D000595 ORTHO05D004141 3.0e-39 166.0 101 70.3
Thecc.05G000100 Theobroma cacao HOM05D000595 ORTHO05D004141 8.9e-39 164.5 103 72.8
HPP92_028112 Vanilla planifolia HOM05D000595 ORTHO05D004141 1.5e-38 163.7 101 69.3
FAN18G1127 Fragaria x ananassa HOM05D000595 ORTHO05D004141 7.5e-38 161.4 88 78.4
Lj8A331G39 Lonicera japonica HOM05D000595 ORTHO05D004141 1.6e-32 143.7 140 57.1
Mapoly0059s0108 Marchantia polymorpha HOM05D000595 ORTHO05D004141 1.4e-28 130.6 110 50.9
Ah.02g117460 Amaranthus hybridus HOM05D000595 ORTHO05D004141 3.9e-10 69.3 73 49.3


User provided reference genes

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