Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07962 Corylus avellana HOM05D007047 ORTHO05D009177 5.8e-225 783.9 391 100.0
CiPaw.12G048400 Carya illinoinensis HOM05D007047 ORTHO05D009177 3.3e-79 299.7 495 43.4
QL12p009257 Quercus lobata HOM05D007047 ORTHO05D009177 1.5e-74 284.3 550 40.2
QL12p009685 Quercus lobata HOM05D007047 ORTHO05D009177 5.5e-74 282.3 550 39.8
CANSAT21G2499 Cannabis sativa HOM05D007047 ORTHO05D009177 5.9e-52 209.1 475 35.6
Prupe.4G179300 Prunus persica HOM05D007047 ORTHO05D009177 2.9e-51 206.8 461 32.5
Potri.003G080700 Populus trichocarpa HOM05D007047 ORTHO05D009177 7.3e-50 202.2 440 36.8
COL.COLO4_10022 Corchorus olitorius HOM05D007047 ORTHO05D009177 1.2e-49 201.4 403 36.2
Dinv28849 Davidia involucrata HOM05D007047 ORTHO05D006202 1.6e-49 201.1 484 33.5
Duzib205G0846 Durio zibethinus HOM05D007047 ORTHO05D009177 2.7e-44 183.7 447 34.2
FAN04G0327 Fragaria x ananassa HOM05D007047 ORTHO05D009177 4.6e-44 183.0 426 34.3
Thecc.03G244500 Theobroma cacao HOM05D007047 ORTHO05D009177 5.9e-44 182.6 350 36.9
Atru.chr9.1243 Acer truncatum HOM05D007047 ORTHO05D009177 3.0e-43 180.3 375 37.9
RcHm_v2.0_Chr7g0204751 Rosa chinensis HOM05D007047 ORTHO05D009177 3.0e-43 180.3 425 36.2
Sabra03G0052300 Salix brachista HOM05D007047 ORTHO05D009177 2.1e-41 174.1 450 34.0
MELO3C013912.2 Cucumis melo HOM05D007047 ORTHO05D009177 2.8e-41 173.7 409 34.5
FAN08G2081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 3.6e-41 173.3 416 33.4
Actinidia31505 Actinidia chinensis HOM05D007047 ORTHO05D006202 6.2e-41 172.6 461 33.0
FvH4_2g33151 Fragaria vesca HOM05D007047 ORTHO05D009177 8.9e-40 168.7 419 32.9
Manes.02G042900 Manihot esculenta HOM05D007047 ORTHO05D009177 2.6e-39 167.2 436 32.6
FAN24G2075 Fragaria x ananassa HOM05D007047 ORTHO05D009177 5.8e-39 166.0 421 33.3
Hma1.2p1_0821F.1_g224180 Hydrangea macrophylla HOM05D007047 ORTHO05D009177 5.8e-39 166.0 475 33.1
CSS0008245 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 9.8e-39 165.2 477 30.4
ClCG10G002400 Citrullus lanatus HOM05D007047 ORTHO05D009177 2.2e-38 164.1 417 33.6
TWI60G0889 Tripterygium wilfordii HOM05D007047 ORTHO05D009177 3.7e-38 163.3 387 37.0
Gorai.004G194800 Gossypium raimondii HOM05D007047 ORTHO05D009177 1.1e-37 161.8 411 36.5
Rhsim07G0117200 Rhododendron simsii HOM05D007047 ORTHO05D009177 3.5e-36 156.8 385 34.0
CsaV3_3G002430 Cucumis sativus L. HOM05D007047 ORTHO05D009177 6.0e-36 156.0 401 34.7
GSVIVG01004793001 Vitis vinifera HOM05D000549 ORTHO05D006202 2.3e-35 154.1 396 32.8
Gohir.A08G166600 Gossypium hirsutum HOM05D007047 ORTHO05D009177 1.1e-34 151.8 342 35.1
Ciclev10024423m.g Citrus clementina HOM05D007047 ORTHO05D009177 4.3e-34 149.8 426 32.2
MD06G1050900 Malus domestica HOM05D007047 ORTHO05D009177 3.6e-33 146.7 426 30.0
Glyma.01G206100 Glycine max HOM05D007047 ORTHO05D009177 4.7e-33 146.4 444 31.3
Lalb_Chr16g0379431 Lupinus albus HOM05D007047 ORTHO05D009177 4.7e-33 146.4 363 34.2
Ah.10g026860 Amaranthus hybridus HOM05D007047 ORTHO05D009177 1.1e-32 145.2 412 33.0
Migut.A01028 Erythranthe guttata HOM05D007047 ORTHO05D009177 1.8e-32 144.4 423 32.2
TPR.G17974 Trifolium pratense HOM05D007047 ORTHO05D009177 3.1e-32 143.7 392 32.9
Peaxi162Scf00190g01213 Petunia axillaris HOM05D007047 ORTHO05D009177 5.2e-32 142.9 350 35.1
Medtr5g013140 Medicago truncatula HOM05D007047 ORTHO05D009177 2.0e-31 141.0 400 31.0
PGR031G1177 Punica granatum HOM05D007047 ORTHO05D009177 1.7e-30 137.9 394 33.2
Hund11335 Selenicereus undatus HOM05D007047 ORTHO05D009177 1.7e-30 137.9 427 32.6
Lj2g0019775 Lotus japonicus HOM05D007047 ORTHO05D009177 8.3e-30 135.6 415 29.2
Nitab4.5_0000506g0030 Nicotiana tabacum HOM05D007047 ORTHO05D009177 1.1e-29 135.2 428 29.0
CAN.G62.14 Capsicum annuum HOM05D007047 ORTHO05D009177 1.4e-29 134.8 417 29.7
Ca_24599_v3 Cicer arietinum L. HOM05D007047 ORTHO05D009177 1.9e-29 134.4 391 31.5
Psat2g177160 Pisum sativum HOM05D007047 ORTHO05D009177 2.1e-28 131.0 388 32.2
Oeu045687.1 Olea europaea HOM05D007047 ORTHO05D009177 3.5e-28 130.2 447 30.4
SalBow6G1440 Salvia bowleyana HOM05D007047 ORTHO05D009177 4.6e-28 129.8 415 29.9
Rhsim07G0117500 Rhododendron simsii HOM05D007047 ORTHO05D009177 1.0e-27 128.6 282 35.5
VMungo1215G0554 Vigna mungo HOM05D002164 ORTHO05D002267 1.7e-27 127.9 453 31.1
THA.LOC104807915 Tarenaya hassleriana HOM05D007047 ORTHO05D009177 2.3e-27 127.5 396 30.1
FAN27G3081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 3.9e-27 126.7 296 34.1
PGSC0003DMG400024159 Solanum tuberosum HOM05D007047 ORTHO05D009177 5.1e-27 126.3 426 29.8
EL10Ac4g09553 Beta vulgaris HOM05D007047 ORTHO05D009177 6.6e-27 125.9 388 31.4
Phvul.002G000400 Phaseolus vulgaris HOM05D007047 ORTHO05D009177 6.6e-27 125.9 395 31.4
arahy.Tifrunner.gnm1.ann1.J4EMKX Arachis hypogaea HOM05D007047 ORTHO05D009177 1.5e-26 124.8 409 29.6
arahy.Tifrunner.gnm1.ann1.XH35PM Arachis hypogaea HOM05D007047 ORTHO05D009177 1.5e-26 124.8 409 29.6
CSS0009500 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 5.6e-26 122.9 411 29.7
TAR375G0331 Trochodendron aralioides HOM05D007047 ORTHO05D009177 2.1e-25 120.9 370 30.5
Carub.0007s2455 Capsella rubella HOM05D007047 ORTHO05D009177 3.6e-25 120.2 414 30.4
Dinv39189 Davidia involucrata HOM05D000549 ORTHO05D006202 3.6e-25 120.2 123 52.0
Nn6g33825 Nelumbo nucifera HOM05D007047 ORTHO05D009177 4.7e-25 119.8 373 31.4
AUR62006813 Chenopodium quinoa HOM05D007047 ORTHO05D009177 8.1e-25 119.0 402 31.1
AUR62000471 Chenopodium quinoa HOM05D007047 ORTHO05D009177 1.4e-24 118.2 398 29.9
SGA_v2.0_scaffold104G30204 Striga asiatica HOM05D007047 ORTHO05D009177 1.4e-24 118.2 428 30.8
PSO063G2347 Papaver somniferum HOM05D007047 ORTHO05D009177 5.2e-24 116.3 464 29.5
Solyc06g060860.2 Solanum lycopersicum HOM05D007047 ORTHO05D009177 8.9e-24 115.5 422 27.5
Sed0008627 Sechium edule HOM05D007047 ORTHO05D009177 2.0e-23 114.4 294 33.7
DCAR_000643 Daucus carota HOM05D007047 ORTHO05D009177 5.8e-23 112.8 358 30.4
AT4G16807 Arabidopsis thaliana HOM05D007047 ORTHO05D009177 2.2e-22 110.9 438 27.6
BcaB04g18396 Brassica carinata HOM05D007047 ORTHO05D006202 2.9e-22 110.5 405 29.9
Thhalv10027153m.g Eutrema salsugineum HOM05D007047 ORTHO05D009177 3.8e-22 110.2 406 28.8
Oeu045675.1 Olea europaea HOM05D007047 ORTHO05D009177 3.8e-22 110.2 347 29.7
FAN20G0731 Fragaria x ananassa HOM05D007047 ORTHO05D009177 1.9e-21 107.8 286 32.2
Aa31LG2G12990 Aethionema arabicum HOM05D007047 ORTHO05D009177 9.2e-21 105.5 407 28.3
Sp7g17290 Schrenkiella parvula HOM05D007047 ORTHO05D009177 1.2e-20 105.1 408 26.5
Ciclev10019636m.g Citrus clementina HOM05D000549 ORTHO05D006202 2.1e-20 104.4 115 53.9
Eucgr.D02116 Eucalyptus grandis HOM05D007047 ORTHO05D009177 2.1e-20 104.4 276 31.5
Cc08_g11870 Coffea canephora HOM05D000549 ORTHO05D006202 4.6e-20 103.2 146 41.1
A08p12720 Brassica napus HOM05D007047 ORTHO05D006202 6.0e-20 102.8 399 28.8
AL7G37840 Arabidopsis lyrata HOM05D007047 ORTHO05D009177 7.8e-20 102.4 428 28.3
MSTRG.25515 Avicennia marina HOM05D007047 ORTHO05D009177 1.0e-19 102.1 475 26.9
Lsat_1_v5_gn_4_126100 Lactuca sativa HOM05D007047 ORTHO05D009177 1.7e-19 101.3 344 33.1
BcaC07g38023 Brassica carinata HOM05D007047 ORTHO05D009177 2.3e-19 100.9 408 28.7
BolC8t48412H Brassica oleracea HOM05D007047 ORTHO05D009177 3.9e-19 100.1 408 28.4
BraA08t33261Z Brassica rapa HOM05D007047 ORTHO05D009177 3.9e-19 100.1 397 29.2
Gohir.D08G185400 Gossypium hirsutum HOM05D007047 ORTHO05D009177 8.6e-19 99.0 194 39.2
CARHR223430 Cardamine hirsuta HOM05D007047 ORTHO05D009177 1.5e-18 98.2 423 27.0
Aqoxy3G02722 Aquilegia oxysepala HOM05D007047 ORTHO05D009177 2.5e-18 97.4 409 28.9
Sopen06g021010 Solanum pennellii HOM05D007047 ORTHO05D009177 1.2e-17 95.1 426 27.5
ECA240G0572 Erigeron canadensis HOM05D007047 ORTHO05D009177 2.1e-17 94.4 347 29.7
Cpa.g.sc559.1 Carica papaya HOM05D007047 ORTHO05D009177 3.1e-16 90.5 338 31.4
FAN18G3895 Fragaria x ananassa HOM05D007047 ORTHO05D009177 5.2e-16 89.7 311 29.6
Nitab4.5_0006375g0010 Nicotiana tabacum HOM05D007047 ORTHO05D009177 2.6e-15 87.4 378 25.1
FvH4_5g19900 Fragaria vesca HOM05D007047 ORTHO05D009177 4.9e-14 83.2 130 41.5
unitig_744.g24476 Utricularia gibba HOM05D007047 ORTHO05D009177 3.2e-13 80.5 280 26.1
Cpa.g.sc89.13 Carica papaya HOM05D007047 ORTHO05D009177 7.1e-13 79.3 166 36.7
Medtr5g013080 Medicago truncatula HOM05D007047 ORTHO05D009177 1.3e-11 75.1 53 56.6
FAN18G3996 Fragaria x ananassa HOM05D007047 ORTHO05D009177 3.9e-11 73.6 130 38.5
Sc07g0009150 Simmondsia chinensis HOM05D007047 ORTHO05D009177 7.3e-10 69.3 253 27.7
HPP92_022107 Vanilla planifolia HOM05D007047 ORTHO05D009177 1.6e-09 68.2 150 34.0
Cpa.g.sc1463.1 Carica papaya HOM05D007047 ORTHO05D009177 2.1e-09 67.8 50 64.0
HanXRQChr11g0329491 Helianthus annuus HOM05D007047 ORTHO05D009177 2.8e-09 67.4 293 25.9
Psat2g156960 Pisum sativum HOM05D007047 ORTHO05D009177 1.8e-08 64.7 161 34.8
Thhalv10027163m.g Eutrema salsugineum HOM05D007047 ORTHO05D009177 3.1e-08 63.9 48 52.1
Psat0s1776g0120 Pisum sativum HOM05D007047 ORTHO05D009177 4.0e-08 63.5 161 34.8


User provided reference genes

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