Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 2.7e-94 348.6 168 100.0
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 2.1e-38 162.9 164 57.3
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 4.0e-37 158.7 164 55.5
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 2.6e-36 156.0 155 55.5
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 3.8e-32 142.1 139 53.2
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 6.5e-32 141.4 148 53.4
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 2.5e-31 139.4 148 50.0
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 5.2e-29 131.7 155 46.5
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 5.2e-29 131.7 148 51.4
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 6.8e-29 131.3 141 50.4
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 8.8e-29 131.0 152 48.7
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.2e-28 130.6 168 45.8
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 1.5e-28 130.2 141 48.9
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.5e-28 130.2 141 48.9
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.5e-28 130.2 141 48.9
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 2.0e-28 129.8 147 47.6
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.6e-28 129.4 141 48.2
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.6e-28 129.4 159 46.5
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 3.4e-28 129.0 140 50.7
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 4.4e-28 128.6 138 48.6
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 9.8e-28 127.5 138 50.0
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 9.8e-28 127.5 141 50.4
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 2.2e-27 126.3 140 50.7
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 2.8e-27 125.9 139 47.5
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 4.8e-27 125.2 139 46.8
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 4.8e-27 125.2 139 48.2
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 4.8e-27 125.2 139 48.2
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 8.3e-27 124.4 148 48.0
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 2.4e-26 122.9 148 46.6
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 4.1e-26 122.1 144 47.2
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 4.1e-26 122.1 144 47.2
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 9.1e-26 120.9 142 45.8
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 1.2e-25 120.6 144 45.1
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 1.2e-25 120.6 144 45.1
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 1.6e-25 120.2 165 45.5
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 2.0e-25 119.8 142 45.1
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 2.0e-25 119.8 144 47.9
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 3.5e-25 119.0 141 48.9
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 3.5e-25 119.0 143 47.6
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 3.5e-25 119.0 140 47.1
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 5.9e-25 118.2 139 46.8
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 5.9e-25 118.2 155 46.5
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 5.9e-25 118.2 147 47.6
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 1.0e-24 117.5 141 46.1
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 1.0e-24 117.5 155 44.5
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 1.0e-24 117.5 140 47.9
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 1.0e-24 117.5 145 46.2
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 1.3e-24 117.1 147 46.3
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 1.3e-24 117.1 149 47.7
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 1.3e-24 117.1 141 46.1
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 1.3e-24 117.1 162 43.8
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 2.2e-24 116.3 139 46.0
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 2.2e-24 116.3 139 45.3
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 2.9e-24 115.9 141 44.7
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 3.8e-24 115.5 163 42.3
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 6.5e-24 114.8 141 47.5
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 6.5e-24 114.8 142 44.4
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 8.5e-24 114.4 155 44.5
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 1.1e-23 114.0 140 45.0
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 1.5e-23 113.6 155 44.5
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 1.5e-23 113.6 142 45.8
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 1.5e-23 113.6 156 41.0
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 1.5e-23 113.6 156 41.0
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 1.9e-23 113.2 154 43.5
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 1.9e-23 113.2 140 46.4
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 3.2e-23 112.5 140 46.4
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 5.5e-23 111.7 156 41.0
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 5.5e-23 111.7 145 44.8
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 5.5e-23 111.7 145 44.8
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 7.2e-23 111.3 139 43.9
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 7.2e-23 111.3 144 43.8
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 1.2e-22 110.5 156 42.3
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 1.6e-22 110.2 142 45.1
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 4.7e-22 108.6 55 83.6
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 8.0e-22 107.8 140 42.9
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 1.4e-21 107.1 139 43.9
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 2.3e-21 106.3 140 42.1
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 5.2e-21 105.1 63 76.2
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 6.8e-21 104.8 140 41.4
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 6.8e-21 104.8 184 38.6
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 8.8e-21 104.4 140 41.4
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 1.2e-20 104.0 140 41.4
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 6.3e-19 98.2 139 37.4
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 1.4e-18 97.1 61 73.8
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 2.4e-18 96.3 53 71.7
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 9.2e-18 94.4 58 69.0
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 5.9e-17 91.7 65 66.2
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 5.0e-16 88.6 129 41.9
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 5.6e-15 85.1 117 40.2
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 5.6e-15 85.1 122 39.3
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 5.6e-15 85.1 123 40.7
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 7.3e-15 84.7 119 42.0
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 1.4e-13 80.5 112 42.0
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 4.0e-13 79.0 112 41.1
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 8.9e-13 77.8 112 42.9
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 4.4e-12 75.5 112 42.9
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 7.5e-12 74.7 140 31.4
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 7.5e-12 74.7 140 31.4
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 2.9e-11 72.8 140 35.0
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 3.7e-11 72.4 110 39.1
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 1.4e-10 70.5 164 33.5
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 1.6e-09 67.0 148 35.1
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 6.6e-08 61.6 109 37.6
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 5.6e-07 58.5 52 46.2
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 1.6e-06 57.0 29 79.3
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 1.6e-06 57.0 53 49.1
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.1e-06 56.6 104 33.7


User provided reference genes

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