Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07889 Corylus avellana HOM05D006466 ORTHO05D008084 6.3e-110 401.0 231 100.0
Cfa012739 Carpinus fangiana HOM05D006466 ORTHO05D008084 3.6e-105 385.2 232 96.1
CiPaw.11G153200 Carya illinoinensis HOM05D006466 ORTHO05D008084 9.2e-77 290.8 232 72.0
Potri.001G123200 Populus trichocarpa HOM05D006466 ORTHO05D008084 5.6e-74 281.6 232 67.2
Ciclev10005762m.g Citrus clementina HOM05D006466 ORTHO05D008084 1.5e-71 273.5 239 66.1
Sabra01G0094900 Salix brachista HOM05D006466 ORTHO05D008084 1.5e-71 273.5 234 65.8
QL12p012545 Quercus lobata HOM05D006466 ORTHO05D008084 4.9e-70 268.5 237 69.6
RcHm_v2.0_Chr7g0203001 Rosa chinensis HOM05D006466 ORTHO05D008084 1.1e-69 267.3 240 68.3
Thecc.03G253200 Theobroma cacao HOM05D006466 ORTHO05D008084 1.1e-69 267.3 235 70.6
Eucgr.D02068 Eucalyptus grandis HOM05D006466 ORTHO05D008084 1.4e-69 266.9 230 67.8
FAN04G2180 Fragaria x ananassa HOM05D006466 ORTHO05D008084 4.1e-69 265.4 236 66.5
FvH4_5g18710 Fragaria vesca HOM05D006466 ORTHO05D008084 2.7e-68 262.7 237 68.4
FAN18G0606 Fragaria x ananassa HOM05D006466 ORTHO05D008084 2.7e-68 262.7 236 68.2
TWI81G0148 Tripterygium wilfordii HOM05D006466 ORTHO05D008084 3.5e-68 262.3 237 65.4
Dinv39131 Davidia involucrata HOM05D006466 ORTHO05D008084 7.8e-68 261.2 231 72.3
Gohir.A12G217700 Gossypium hirsutum HOM05D006466 ORTHO05D008084 3.9e-67 258.8 234 67.1
MELO3C005537.2 Cucumis melo HOM05D006466 ORTHO05D008084 8.6e-67 257.7 230 64.3
CsaV3_5G004180 Cucumis sativus L. HOM05D006466 ORTHO05D008084 2.5e-66 256.1 230 63.0
ClCG01G004000 Citrullus lanatus HOM05D006466 ORTHO05D008084 4.3e-66 255.4 230 64.3
Gorai.008G235900 Gossypium raimondii HOM05D006466 ORTHO05D008084 7.3e-66 254.6 234 66.7
GSVIVG01001313001 Vitis vinifera HOM05D006466 ORTHO05D008084 1.2e-65 253.8 231 64.9
Gohir.D12G220200 Gossypium hirsutum HOM05D006466 ORTHO05D008084 1.6e-65 253.4 234 66.2
Actinidia27463 Actinidia chinensis HOM05D006466 ORTHO05D008084 3.4e-63 245.7 236 61.0
Atru.chr2.1841 Acer truncatum HOM05D006466 ORTHO05D008084 4.4e-63 245.4 230 63.5
FAN13G1623 Fragaria x ananassa HOM05D006466 ORTHO05D008084 2.9e-62 242.7 232 61.6
Sed0026776 Sechium edule HOM05D006466 ORTHO05D008084 3.2e-61 239.2 230 62.2
Hma1.2p1_2380F.1_g320960 Hydrangea macrophylla HOM05D006466 ORTHO05D008084 1.3e-59 233.8 241 60.2
Sed0012351 Sechium edule HOM05D006466 ORTHO05D008084 1.3e-59 233.8 239 60.3
Manes.01G079600 Manihot esculenta HOM05D006466 ORTHO05D008084 1.7e-59 233.4 233 65.2
TAR375G0032 Trochodendron aralioides HOM05D006466 ORTHO05D008084 1.7e-59 233.4 231 62.8
FAN08G0853 Fragaria x ananassa HOM05D006466 ORTHO05D008084 6.6e-59 231.5 235 61.7
MD04G1088600 Malus domestica HOM05D006466 ORTHO05D008084 1.5e-58 230.3 244 65.6
PGR031G1557 Punica granatum HOM05D006466 ORTHO05D008084 1.5e-58 230.3 238 61.3
Manes.15G178500 Manihot esculenta HOM05D006466 ORTHO05D008084 1.8e-56 223.4 216 61.1
Manes.15G178400 Manihot esculenta HOM05D006466 ORTHO05D008084 8.9e-56 221.1 216 60.6
CANSAT21G1921 Cannabis sativa HOM05D006466 ORTHO05D008084 5.8e-55 218.4 244 63.1
Cpa.g.sc29.144 Carica papaya HOM05D006466 ORTHO05D008084 1.7e-54 216.9 235 60.4
DCAR_008489 Daucus carota HOM05D005079 ORTHO05D006362 6.4e-54 214.9 236 53.8
PGSC0003DMG401004755 Solanum tuberosum HOM05D006466 ORTHO05D008084 1.1e-53 214.2 237 58.2
Sopen08g027210 Solanum pennellii HOM05D006466 ORTHO05D008084 4.1e-53 212.2 237 57.8
Solyc08g078740.1 Solanum lycopersicum HOM05D006466 ORTHO05D008084 5.4e-53 211.8 237 57.8
Carub.0007s2494 Capsella rubella HOM05D006466 ORTHO05D008084 7.1e-53 211.5 255 51.0
TPR.G37616 Trifolium pratense HOM05D006466 ORTHO05D008084 2.1e-52 209.9 242 61.6
arahy.Tifrunner.gnm1.ann1.VT8LY8 Arachis hypogaea HOM05D006466 ORTHO05D008084 2.7e-52 209.5 224 61.2
MSTRG.12091 Avicennia marina HOM05D006466 ORTHO05D008084 7.8e-52 208.0 239 58.6
Lj1A353T9 Lonicera japonica HOM05D006466 ORTHO05D008084 1.0e-51 207.6 228 53.9
Lsat_1_v5_gn_3_521 Lactuca sativa HOM05D006466 ORTHO05D008084 2.3e-51 206.5 228 55.7
Nn1g01036 Nelumbo nucifera HOM05D006466 ORTHO05D008084 2.3e-51 206.5 228 59.2
Prupe.5G071300 Prunus persica HOM05D006466 ORTHO05D008084 3.9e-51 205.7 232 56.9
Eucgr.D02058 Eucalyptus grandis HOM05D006466 ORTHO05D008084 8.6e-51 204.5 231 56.7
CARHR222950 Cardamine hirsuta HOM05D006466 ORTHO05D008084 1.1e-50 204.1 259 50.2
Medtr4g101030 Medicago truncatula HOM05D006466 ORTHO05D008084 1.5e-50 203.8 241 56.0
Aa31LG2G12660 Aethionema arabicum HOM05D006466 ORTHO05D008084 1.9e-50 203.4 247 51.0
Ah.12g056750 Amaranthus hybridus HOM05D006466 ORTHO05D008084 1.9e-50 203.4 232 54.7
CDE02G4728 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 2.5e-50 203.0 211 55.9
Lj4g0024258 Lotus japonicus HOM05D006466 ORTHO05D008084 4.3e-50 202.2 235 55.7
arahy.Tifrunner.gnm1.ann1.HK6I2L Arachis hypogaea HOM05D006466 ORTHO05D008084 5.6e-50 201.8 224 58.0
Nitab4.5_0000312g0170 Nicotiana tabacum HOM05D006466 ORTHO05D008084 5.6e-50 201.8 241 53.9
AL7G38350 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 1.2e-49 200.7 257 49.8
AL7G38400 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 1.2e-49 200.7 257 49.8
BcaNung02868 Brassica carinata HOM05D006466 ORTHO05D008084 1.6e-49 200.3 255 49.4
arahy.Tifrunner.gnm1.ann1.LISY29 Arachis hypogaea HOM05D006466 ORTHO05D008084 2.1e-49 199.9 231 58.9
Nitab4.5_0008481g0010 Nicotiana tabacum HOM05D006466 ORTHO05D008084 2.1e-49 199.9 235 54.5
Sp7g15110 Schrenkiella parvula HOM05D006466 ORTHO05D008084 3.6e-49 199.1 259 49.4
Thhalv10026056m.g Eutrema salsugineum HOM05D006466 ORTHO05D008084 4.4e-47 192.2 258 48.4
SalBow6G4398 Salvia bowleyana HOM05D006466 ORTHO05D008084 4.4e-47 192.2 182 61.0
SHI10480 Sapria himalayana HOM05D006466 ORTHO05D008084 7.6e-47 191.4 237 51.9
Peaxi162Scf00002g00172 Petunia axillaris HOM05D006466 ORTHO05D008084 9.9e-47 191.0 262 55.0
PSO528G0015 Papaver somniferum HOM05D006466 ORTHO05D008084 1.3e-46 190.7 230 54.3
Phvul.003G219800 Phaseolus vulgaris HOM05D006466 ORTHO05D008084 1.7e-46 190.3 227 57.7
PSO170G1975 Papaver somniferum HOM05D006466 ORTHO05D008084 2.9e-46 189.5 229 52.4
arahy.Tifrunner.gnm1.ann1.MY6G43 Arachis hypogaea HOM05D006466 ORTHO05D008084 4.9e-46 188.7 224 58.5
A03p49940 Brassica napus HOM05D006466 ORTHO05D008084 1.1e-45 187.6 258 49.6
BraA03t14087Z Brassica rapa HOM05D006466 ORTHO05D008084 1.1e-45 187.6 258 49.6
C07p47980 Brassica napus HOM05D006466 ORTHO05D008084 1.9e-45 186.8 260 48.5
BolC7t45321H Brassica oleracea HOM05D006466 ORTHO05D008084 1.9e-45 186.8 260 48.5
GSVIVG01030884001 Vitis vinifera HOM05D006466 ORTHO05D008084 1.9e-45 186.8 224 52.7
BcaC06g33488 Brassica carinata HOM05D006466 ORTHO05D008084 2.4e-45 186.4 259 48.3
Lalb_Chr16g0389331 Lupinus albus HOM05D006466 ORTHO05D008084 5.4e-45 185.3 236 52.1
Rhsim07G0108000 Rhododendron simsii HOM05D006466 ORTHO05D008084 7.1e-45 184.9 179 64.8
SGA_v2.0_scaffold120G32877 Striga asiatica HOM05D006466 ORTHO05D008084 7.1e-45 184.9 253 52.2
VMungo0251G3296 Vigna mungo HOM05D006466 ORTHO05D008084 9.2e-45 184.5 230 60.9
ATR0193G040 Amborella trichopoda HOM05D006466 ORTHO05D008084 7.8e-44 181.4 168 57.7
AT4G16535 Arabidopsis thaliana HOM05D006466 ORTHO05D008084 1.0e-43 181.0 257 47.1
Migut.A00968 Erythranthe guttata HOM05D006466 ORTHO05D008084 2.3e-43 179.9 254 50.4
Psat4g071640 Pisum sativum HOM05D006466 ORTHO05D008084 3.0e-43 179.5 193 60.6
unitig_61.g26196 Utricularia gibba HOM05D006466 ORTHO05D008084 1.1e-42 177.6 234 50.4
Aqoxy6G01886 Aquilegia oxysepala HOM05D006466 ORTHO05D008084 2.5e-42 176.4 243 54.3
HPP92_014482 Vanilla planifolia HOM05D006466 ORTHO05D008084 4.3e-42 175.6 250 46.4
ECA232G3467 Erigeron canadensis HOM05D006466 ORTHO05D008084 9.6e-42 174.5 227 49.8
Nn6g33981 Nelumbo nucifera HOM05D006466 ORTHO05D008084 2.1e-41 173.3 178 56.7
Lj8A452G56 Lonicera japonica HOM05D006466 ORTHO05D008084 2.2e-38 163.3 230 46.5
Cc08_g12600 Coffea canephora HOM05D006466 ORTHO05D008084 2.9e-38 162.9 208 50.5
Oeu019590.1 Olea europaea HOM05D006466 ORTHO05D008084 6.4e-38 161.8 224 48.2
Glyma.17G140900 Glycine max HOM05D006466 ORTHO05D008084 8.4e-38 161.4 231 53.2
Ca_21959_v3 Cicer arietinum L. HOM05D006466 ORTHO05D008084 2.4e-37 159.8 183 52.5
CDE11G0010 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 1.5e-34 150.6 189 49.2
Os10g0507500 Oryza sativa ssp. japonica HOM05D006466 ORTHO05D008084 1.9e-34 150.2 252 45.2
AUR62007505 Chenopodium quinoa HOM05D006466 ORTHO05D008084 1.3e-33 147.5 221 44.3
SEGI_30297 Sequoiadendron giganteum HOM05D006466 ORTHO05D008084 8.4e-30 134.8 233 40.3
AUR62039958 Chenopodium quinoa HOM05D006466 ORTHO05D008084 1.1e-29 134.4 231 43.7
arahy.Tifrunner.gnm1.ann1.AC5BZW Arachis hypogaea HOM05D006466 ORTHO05D008084 2.7e-28 129.8 170 50.6
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 2.8e-25 119.8 230 37.8
arahy.Tifrunner.gnm1.ann1.Y2DLV0 Arachis hypogaea HOM05D006466 ORTHO05D008084 8.1e-25 118.2 121 63.6
Mapoly0015s0012 Marchantia polymorpha HOM05D006466 ORTHO05D008084 1.4e-21 107.5 252 34.5
arahy.Tifrunner.gnm1.ann1.W2BU8F Arachis hypogaea HOM05D004339 ORTHO05D002389 2.5e-21 106.7 170 47.6
HanXRQChr02g0051581 Helianthus annuus HOM05D006466 ORTHO05D008084 2.3e-19 100.1 112 53.6
Pp3c3_19850 Physcomitrium patens HOM05D006466 ORTHO05D008084 6.7e-19 98.6 219 35.6
Oeu039628.1 Olea europaea HOM05D006466 ORTHO05D008084 1.3e-17 94.4 54 88.9
Eucgr.L01522 Eucalyptus grandis HOM05D006466 ORTHO05D008084 3.1e-16 89.7 51 88.2
Sc22g0000810 Simmondsia chinensis HOM05D006466 ORTHO05D008084 3.1e-16 89.7 119 55.5
Zm00001eb044010 Zea mays HOM05D006466 ORTHO05D008084 6.9e-16 88.6 62 71.0
BcaC04g19403 Brassica carinata HOM05D006466 ORTHO05D008084 2.5e-13 80.1 150 42.7
BolC9t58475H Brassica oleracea HOM05D006466 ORTHO05D008084 2.5e-13 80.1 150 42.7
Actinidia05202 Actinidia chinensis HOM05D006466 ORTHO05D008084 3.5e-12 76.3 89 53.9
arahy.Tifrunner.gnm1.ann1.X9JZY0 Arachis hypogaea HOM05D004687 ORTHO05D006002 1.6e-09 67.4 53 64.2
BcaC01g01648 Brassica carinata HOM05D006466 ORTHO05D008084 4.8e-09 65.9 94 46.8
C03p73400 Brassica napus HOM05D006466 ORTHO05D008084 3.1e-08 63.2 108 41.7
BraA04t17310Z Brassica rapa HOM05D006466 ORTHO05D008084 1.3e-06 57.8 76 44.7
CBR_g29445 Chara braunii HOM05D006466 ORTHO05D008084 2.9e-06 56.6 56 53.6
unitig_0.g1068 Utricularia gibba HOM05D006466 ORTHO05D008084 2.9e-06 56.6 40 67.5
AT2G03010 Arabidopsis thaliana HOM05D007773 ORTHO05D008084 8.5e-06 55.1 208 33.2


User provided reference genes

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