Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07823 Corylus avellana HOM05D004277 ORTHO05D005148 2.7e-197 691.8 354 100.0
CiPaw.11G062700 Carya illinoinensis HOM05D004277 ORTHO05D005148 2.5e-158 562.4 352 82.1
QL12p004433 Quercus lobata HOM05D004277 ORTHO05D005148 1.1e-153 547.0 339 82.3
GSVIVG01036797001 Vitis vinifera HOM05D004277 ORTHO05D005148 4.3e-150 535.0 339 77.3
FAN21G0666 Fragaria x ananassa HOM05D004277 ORTHO05D005148 7.3e-150 534.3 340 77.9
FvH4_3g15310 Fragaria vesca HOM05D004277 ORTHO05D005148 2.8e-149 532.3 340 77.6
Thecc.07G167700 Theobroma cacao HOM05D004277 ORTHO05D005148 2.8e-149 532.3 339 77.3
FAN16G3091 Fragaria x ananassa HOM05D004277 ORTHO05D005148 3.6e-149 531.9 340 77.9
Prupe.4G136200 Prunus persica HOM05D004277 ORTHO05D005148 3.6e-149 531.9 329 80.5
Dinv19596 Davidia involucrata HOM05D004277 ORTHO05D005148 8.1e-149 530.8 351 75.2
RcHm_v2.0_Chr5g0025751 Rosa chinensis HOM05D004277 ORTHO05D005148 8.1e-149 530.8 330 79.4
FAN11G0660 Fragaria x ananassa HOM05D004277 ORTHO05D005148 1.1e-148 530.4 340 77.6
Atru.chr1.126 Acer truncatum HOM05D004277 ORTHO05D005148 7.5e-147 524.2 339 77.0
Ciclev10007189m.g Citrus clementina HOM05D004277 ORTHO05D005148 2.9e-146 522.3 343 75.5
CSS0042003 Camellia sinensis var. sinensis HOM05D004277 ORTHO05D005148 1.1e-145 520.4 340 76.8
Potri.007G067700 Populus trichocarpa HOM05D004277 ORTHO05D005148 1.1e-145 520.4 338 77.2
Cpa.g.sc34.11 Carica papaya HOM05D004277 ORTHO05D005148 1.2e-144 516.9 337 75.7
Manes.03G176500 Manihot esculenta HOM05D004277 ORTHO05D005148 1.1e-142 510.4 336 76.5
vmacro11705 Vaccinium macrocarpon HOM05D004277 ORTHO05D005148 5.6e-142 508.1 351 72.9
Sabra07G0053700 Salix brachista HOM05D004277 ORTHO05D005148 9.5e-142 507.3 348 73.9
COL.COLO4_05147 Corchorus olitorius HOM05D004277 ORTHO05D004634 1.2e-141 506.9 329 75.7
Rhsim06G0241600 Rhododendron simsii HOM05D004277 ORTHO05D005148 8.1e-141 504.2 351 73.2
Lj2A15G78 Lonicera japonica HOM05D004277 ORTHO05D005148 1.1e-140 503.8 350 74.0
Actinidia12771 Actinidia chinensis HOM05D004277 ORTHO05D005148 1.5e-139 500.0 341 74.2
TAR626G1109 Trochodendron aralioides HOM05D004277 ORTHO05D005148 9.9e-139 497.3 342 73.1
CANSAT80G1893 Cannabis sativa HOM05D004277 ORTHO05D005148 2.9e-138 495.7 350 72.0
Gohir.A08G232300 Gossypium hirsutum HOM05D004277 ORTHO05D005148 3.8e-138 495.4 329 74.2
Gohir.D08G252532 Gossypium hirsutum HOM05D004277 ORTHO05D005148 1.9e-137 493.0 329 74.2
Gorai.004G269300 Gossypium raimondii HOM05D004277 ORTHO05D005148 3.2e-137 492.3 329 73.9
Ca_12380_v3 Cicer arietinum L. HOM05D004277 ORTHO05D005148 2.7e-136 489.2 341 73.3
Ca_12388_v3 Cicer arietinum L. HOM05D004277 ORTHO05D005148 2.7e-136 489.2 341 73.3
CsaV3_7G022870 Cucumis sativus L. HOM05D004277 ORTHO05D005148 1.0e-135 487.3 339 71.7
Oeu019710.1 Olea europaea HOM05D004277 ORTHO05D005148 1.7e-135 486.5 341 70.4
Psat6g100160 Pisum sativum HOM05D004277 ORTHO05D005148 2.5e-134 482.6 331 72.8
Medtr1g038850 Medicago truncatula HOM05D004277 ORTHO05D005148 6.2e-133 478.0 341 70.4
Sed0006880 Sechium edule HOM05D004277 ORTHO05D005148 6.2e-133 478.0 338 71.3
MELO3C012612.2 Cucumis melo HOM05D004277 ORTHO05D005148 1.1e-132 477.2 339 70.2
VMungo0251G3136 Vigna mungo HOM05D004277 ORTHO05D005148 2.6e-131 472.6 351 69.2
Lj2g0013005 Lotus japonicus HOM05D004277 ORTHO05D005148 4.4e-131 471.9 331 71.0
Eucgr.F04450 Eucalyptus grandis HOM05D004277 ORTHO05D005148 2.9e-130 469.2 343 68.8
Aqoxy7G03893 Aquilegia oxysepala HOM05D004277 ORTHO05D005148 6.4e-130 468.0 339 67.3
Nn3g21002 Nelumbo nucifera HOM05D004277 ORTHO05D005148 1.1e-129 467.2 336 68.8
Glyma.09G284900 Glycine max HOM05D004277 ORTHO05D005148 1.4e-129 466.8 338 70.1
ClCG09G022670 Citrullus lanatus HOM05D004277 ORTHO05D005148 4.6e-128 461.8 332 69.9
Phvul.003G002100 Phaseolus vulgaris HOM05D004277 ORTHO05D005148 8.7e-127 457.6 356 67.1
Peaxi162Scf00006g01510 Petunia axillaris HOM05D004277 ORTHO05D005148 1.5e-126 456.8 339 67.0
Peaxi162Scf00078g01336 Petunia axillaris HOM05D004277 ORTHO05D005148 1.5e-126 456.8 339 67.3
PGR031G1415 Punica granatum HOM05D004277 ORTHO05D005148 2.5e-126 456.1 340 69.7
TWI38G1370 Tripterygium wilfordii HOM05D004277 ORTHO05D005148 7.3e-126 454.5 357 65.8
Lalb_Chr18g0046601 Lupinus albus HOM05D004277 ORTHO05D005148 4.5e-123 445.3 331 67.7
Cc05_g16300 Coffea canephora HOM05D004277 ORTHO05D005148 7.6e-123 444.5 335 65.7
ECA240G2290 Erigeron canadensis HOM05D004277 ORTHO05D005148 3.8e-122 442.2 332 67.5
SalBow7G4120 Salvia bowleyana HOM05D004277 ORTHO05D005148 8.4e-122 441.0 340 65.3
EL10Ac2g03265 Beta vulgaris HOM05D004277 ORTHO05D005148 1.1e-121 440.7 337 65.6
HanXRQChr03g0078241 Helianthus annuus HOM05D004277 ORTHO05D005148 1.1e-121 440.7 329 66.0
PSO210G0403 Papaver somniferum HOM05D004277 ORTHO05D005148 3.2e-121 439.1 330 66.4
DCAR_019921 Daucus carota HOM05D004277 ORTHO05D005148 1.2e-120 437.2 352 63.4
Solyc12g017280.2 Solanum lycopersicum HOM05D004277 ORTHO05D005148 2.1e-120 436.4 349 63.6
Sopen12g008110 Solanum pennellii HOM05D004277 ORTHO05D005148 2.1e-120 436.4 349 63.6
SGA_v2.0_scaffold239G44031 Striga asiatica HOM05D004277 ORTHO05D005148 3.5e-120 435.6 339 61.9
PSO210G1337 Papaver somniferum HOM05D004277 ORTHO05D005148 3.9e-119 432.2 330 65.2
Thhalv10018016m.g Eutrema salsugineum HOM05D004277 ORTHO05D005148 8.7e-119 431.0 350 63.4
THA.LOC104812364 Tarenaya hassleriana HOM05D004277 ORTHO05D005148 4.8e-117 425.2 344 61.9
A02p22660 Brassica napus HOM05D004277 ORTHO05D005148 1.1e-116 424.1 343 63.3
CARHR072840 Cardamine hirsuta HOM05D004277 ORTHO05D005148 1.1e-116 424.1 356 62.1
Lsat_1_v5_gn_7_70840 Lactuca sativa HOM05D004277 ORTHO05D005148 2.4e-116 422.9 335 65.4
C02p36270 Brassica napus HOM05D004277 ORTHO05D005148 9.0e-116 421.0 344 63.4
Sp5g34240 Schrenkiella parvula HOM05D004277 ORTHO05D005148 1.2e-115 420.6 346 62.1
Migut.H01674 Erythranthe guttata HOM05D004277 ORTHO05D005148 1.5e-115 420.2 342 61.7
BcaC03g15873 Brassica carinata HOM05D004277 ORTHO05D005148 2.0e-115 419.9 344 63.4
BolC2t09641H Brassica oleracea HOM05D004277 ORTHO05D005148 2.0e-115 419.9 344 63.4
AUR62036983 Chenopodium quinoa HOM05D004277 ORTHO05D005148 2.0e-115 419.9 341 62.2
BcaB05g25178 Brassica carinata HOM05D004277 ORTHO05D005148 4.5e-115 418.7 344 62.2
arahy.Tifrunner.gnm1.ann1.3DGA3E Arachis hypogaea HOM05D004277 ORTHO05D005148 5.8e-115 418.3 360 61.4
BraA02t07267Z Brassica rapa HOM05D004277 ORTHO05D005148 5.8e-115 418.3 344 62.8
arahy.Tifrunner.gnm1.ann1.J7P8I0 Arachis hypogaea HOM05D004277 ORTHO05D005148 9.9e-115 417.5 337 64.4
AT1G79190 Arabidopsis thaliana HOM05D004277 ORTHO05D005148 1.7e-114 416.8 348 61.2
AL2G39660 Arabidopsis lyrata HOM05D004277 ORTHO05D005148 2.2e-114 416.4 355 60.6
Carub.0002s2606 Capsella rubella HOM05D004277 ORTHO05D005148 6.4e-114 414.8 350 61.1
AUR62006227 Chenopodium quinoa HOM05D004277 ORTHO05D005148 1.1e-113 414.1 342 61.7
Aa31LG4G1820 Aethionema arabicum HOM05D004277 ORTHO05D005148 1.6e-112 410.2 342 60.2
Ah.02g131470 Amaranthus hybridus HOM05D004277 ORTHO05D005148 1.3e-111 407.1 337 61.1
MBI02_g15959_MAGBIO Magnolia biondii HOM05D004277 ORTHO05D005148 1.1e-110 404.1 331 61.6
Sc06g0002790 Simmondsia chinensis HOM05D004277 ORTHO05D005148 3.7e-109 399.1 333 60.7
Nitab4.5_0000388g0130 Nicotiana tabacum HOM05D004277 ORTHO05D005148 4.0e-108 395.6 330 62.4
unitig_8.g4753 Utricularia gibba HOM05D004277 ORTHO05D005148 2.0e-107 393.3 336 57.1
ATR0763G037 Amborella trichopoda HOM05D004277 ORTHO05D005148 6.5e-106 388.3 342 56.7
Hma1.2p1_1054F.1_g252470 Hydrangea macrophylla HOM05D004277 ORTHO05D005148 6.5e-106 388.3 304 65.5
HPP92_021082 Vanilla planifolia HOM05D004277 ORTHO05D005148 5.5e-105 385.2 334 57.5
Nitab4.5_0009962g0020 Nicotiana tabacum HOM05D004277 ORTHO05D005148 6.7e-95 351.7 274 64.2
Zm00001eb224850 Zea mays HOM05D004277 ORTHO05D005148 1.5e-86 323.9 340 51.5
MD10G1205800 Malus domestica HOM05D004277 ORTHO05D005148 9.8e-62 241.5 232 59.1
MD05G1224300 Malus domestica HOM05D004277 ORTHO05D005148 3.8e-58 229.6 149 78.5
SEGI_00999 Sequoiadendron giganteum HOM05D004277 ORTHO05D005148 1.1e-57 228.0 280 42.9
TAR624G0115 Trochodendron aralioides HOM05D004277 ORTHO05D005148 8.6e-50 201.8 192 58.9
TPR.G40005 Trifolium pratense HOM05D004277 ORTHO05D005148 9.2e-44 181.8 150 64.7
Pp3c22_19900 Physcomitrium patens HOM05D004277 ORTHO05D005148 6.6e-42 175.6 338 34.0
BcaB02g08672 Brassica carinata HOM05D004277 ORTHO05D005148 1.6e-40 171.0 173 56.1
CDE05G2591 Ceratophyllum demersum HOM05D004277 ORTHO05D005148 2.2e-37 160.6 143 55.9
Mapoly0151s0022 Marchantia polymorpha HOM05D004277 ORTHO05D005148 1.1e-33 148.3 326 32.8
Zm00001eb060300 Zea mays HOM05D004277 ORTHO05D005148 1.9e-28 131.0 138 51.4
CDE05G3501 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 5.6e-25 119.4 97 62.9
MD10G1205600 Malus domestica HOM05D004277 ORTHO05D005148 5.1e-18 96.3 61 77.0
CBR_g39747 Chara braunii HOM05D004277 ORTHO05D005148 7.8e-11 72.4 265 26.4
Cre01.g039600 Chlamydomonas reinhardtii HOM05D004277 ORTHO05D005148 2.8e-08 63.9 293 23.5


User provided reference genes

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