Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07818 Corylus avellana HOM05D003670 ORTHO05D004767 1.3e-171 606.3 301 100.0
Cfa022976 Carpinus fangiana HOM05D003670 ORTHO05D004767 1.2e-153 546.6 322 87.3
CiPaw.11G061900 Carya illinoinensis HOM05D003670 ORTHO05D004767 4.9e-139 498.0 323 80.2
QL04p088520 Quercus lobata HOM05D003670 ORTHO05D004767 9.6e-135 483.8 349 73.4
MD05G1228000 Malus domestica HOM05D003670 ORTHO05D004767 5.5e-130 468.0 324 75.3
Manes.06G175700 Manihot esculenta HOM05D003670 ORTHO05D004767 1.2e-129 466.8 323 74.0
Manes.14G010300 Manihot esculenta HOM05D003670 ORTHO05D004767 4.6e-129 464.9 323 73.7
RcHm_v2.0_Chr5g0024611 Rosa chinensis HOM05D003670 ORTHO05D004767 6.7e-128 461.1 326 75.8
Potri.007G069300 Populus trichocarpa HOM05D003670 ORTHO05D004767 1.1e-127 460.3 324 73.8
CSS0006756 Camellia sinensis var. sinensis HOM05D003670 ORTHO05D004767 3.3e-127 458.8 326 73.0
FvH4_3g14990 Fragaria vesca HOM05D003670 ORTHO05D004767 5.6e-127 458.0 326 74.2
FAN11G2825 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.6e-126 456.4 326 73.9
Lj3g0014239 Lotus japonicus HOM05D003670 ORTHO05D004767 1.6e-126 456.4 324 73.1
TWI39G0091 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 2.1e-126 456.1 323 74.6
Prupe.4G134300 Prunus persica HOM05D003670 ORTHO05D004767 3.7e-126 455.3 325 73.2
Glyma.15G260300 Glycine max HOM05D003670 ORTHO05D004767 4.8e-126 454.9 327 73.1
FAN21G1395 Fragaria x ananassa HOM05D003670 ORTHO05D004767 8.2e-126 454.1 326 73.6
Glyma.08G167100 Glycine max HOM05D003670 ORTHO05D004767 8.2e-126 454.1 327 73.4
Gohir.D13G127300 Gossypium hirsutum HOM05D003670 ORTHO05D004767 1.1e-125 453.8 323 72.4
Hma1.2p1_0151F.1_g067325 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 3.1e-125 452.2 323 72.1
Thecc.07G180400 Theobroma cacao HOM05D003670 ORTHO05D004767 3.1e-125 452.2 325 72.6
MD10G1208500 Malus domestica HOM05D003670 ORTHO05D004767 5.3e-125 451.4 324 73.8
TWI38G1711 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 9.0e-125 450.7 323 74.3
Gorai.013G142500 Gossypium raimondii HOM05D003670 ORTHO05D004767 2.0e-124 449.5 324 72.2
FAN25G1710 Fragaria x ananassa HOM05D003670 ORTHO05D004767 2.6e-124 449.1 340 71.2
Lj2A15G76 Lonicera japonica HOM05D003670 ORTHO05D004767 5.8e-124 448.0 306 75.2
Gohir.A13G123400 Gossypium hirsutum HOM05D003670 ORTHO05D004767 7.6e-124 447.6 323 71.2
GSVIVG01036786001 Vitis vinifera HOM05D003670 ORTHO05D004767 1.3e-123 446.8 323 70.9
Phvul.005G050400 Phaseolus vulgaris HOM05D003670 ORTHO05D004767 2.2e-123 446.0 327 71.6
Nitab4.5_0006241g0010 Nicotiana tabacum HOM05D003670 ORTHO05D004767 1.9e-122 443.0 323 70.3
Ciclev10005196m.g Citrus clementina HOM05D003670 ORTHO05D004767 2.5e-122 442.6 324 71.6
Rhsim06G0242300 Rhododendron simsii HOM05D003670 ORTHO05D004767 5.5e-122 441.4 349 67.0
TPR.G33813 Trifolium pratense HOM05D003670 ORTHO05D004767 7.1e-122 441.0 323 71.2
Lalb_Chr25g0284691 Lupinus albus HOM05D003670 ORTHO05D004767 4.6e-121 438.3 325 70.5
Medtr2g067080 Medicago truncatula HOM05D003670 ORTHO05D004767 6.0e-121 438.0 325 70.8
Lsat_1_v5_gn_7_110680 Lactuca sativa HOM05D003670 ORTHO05D004767 1.0e-120 437.2 323 69.7
VMungo1080G1660 Vigna mungo HOM05D003670 ORTHO05D004767 1.3e-120 436.8 318 72.3
Ca_03600_v3 Cicer arietinum L. HOM05D003670 ORTHO05D004767 1.8e-120 436.4 325 71.4
TAR583G0001 Trochodendron aralioides HOM05D003670 ORTHO05D004767 1.8e-120 436.4 323 70.0
Psat1g013760 Pisum sativum HOM05D003670 ORTHO05D004767 5.1e-120 434.9 323 70.6
PGR031G1669 Punica granatum HOM05D003670 ORTHO05D004767 5.1e-120 434.9 327 70.0
Sabra07G0056700 Salix brachista HOM05D003670 ORTHO05D004767 8.7e-120 434.1 328 69.8
DCAR_019919 Daucus carota HOM05D003670 ORTHO05D004767 6.3e-118 427.9 304 71.4
HanXRQChr11g0335601 Helianthus annuus HOM05D003670 ORTHO05D004767 8.2e-118 427.6 323 70.3
CsaV3_3G018980 Cucumis sativus L. HOM05D003670 ORTHO05D004767 2.4e-117 426.0 323 68.1
MBI02_g18168_MAGBIO Magnolia biondii HOM05D003670 ORTHO05D004767 4.1e-117 425.2 323 69.0
Nitab4.5_0000029g0340 Nicotiana tabacum HOM05D003670 ORTHO05D004767 9.0e-117 424.1 323 69.0
Eucgr.F04458 Eucalyptus grandis HOM05D003670 ORTHO05D004767 1.5e-116 423.3 323 70.9
COL.COLO4_32264 Corchorus olitorius HOM05D003670 ORTHO05D004767 2.6e-116 422.5 290 75.2
MELO3C019489.2 Cucumis melo HOM05D003670 ORTHO05D004767 4.5e-116 421.8 323 67.2
Hund20101 Selenicereus undatus HOM05D003670 ORTHO05D004767 4.5e-116 421.8 303 68.3
SGA_v2.0_scaffold49G18190 Striga asiatica HOM05D003670 ORTHO05D004767 5.9e-116 421.4 269 76.6
Duzib213G1009 Durio zibethinus HOM05D003670 ORTHO05D004767 1.7e-115 419.9 319 69.9
Cc05_g16310 Coffea canephora HOM05D003670 ORTHO05D004767 5.0e-115 418.3 325 67.1
Peaxi162Scf00452g00333 Petunia axillaris HOM05D003670 ORTHO05D004767 6.5e-115 417.9 323 66.3
Nitab4.5_0000388g0140 Nicotiana tabacum HOM05D003670 ORTHO05D004767 3.2e-114 415.6 324 67.3
CANSAT80G2697 Cannabis sativa HOM05D003670 ORTHO05D004767 9.3e-114 414.1 327 68.5
CARHR016930 Cardamine hirsuta HOM05D003670 ORTHO05D004767 9.3e-114 414.1 327 66.4
Sopen07g034740 Solanum pennellii HOM05D003670 ORTHO05D004767 1.2e-113 413.7 326 68.7
PGSC0003DMG400022232 Solanum tuberosum HOM05D003670 ORTHO05D004767 1.6e-113 413.3 323 68.7
Sed0012107 Sechium edule HOM05D003670 ORTHO05D004767 3.6e-113 412.1 323 65.6
Migut.H01671 Erythranthe guttata HOM05D003670 ORTHO05D004767 4.6e-113 411.8 328 65.9
Sabra05G0078800 Salix brachista HOM05D003670 ORTHO05D004767 4.6e-113 411.8 297 71.4
CAN.G943.51 Capsicum annuum HOM05D003670 ORTHO05D004767 7.9e-113 411.0 325 67.1
Solyc07g066580.3 Solanum lycopersicum HOM05D003670 ORTHO05D004767 7.9e-113 411.0 325 68.3
Potri.005G095300 Populus trichocarpa HOM05D003670 ORTHO05D004767 1.8e-112 409.8 265 78.5
vmacro11699 Vaccinium macrocarpon HOM05D003670 ORTHO05D004767 5.1e-112 408.3 299 69.9
Sp5g34280 Schrenkiella parvula HOM05D003670 ORTHO05D004767 6.7e-112 407.9 324 66.7
Sc06g0002800 Simmondsia chinensis HOM05D003670 ORTHO05D004767 6.7e-112 407.9 324 65.7
PSO541G1524 Papaver somniferum HOM05D003670 ORTHO05D004767 1.1e-111 407.1 326 66.0
ATR0763G120 Amborella trichopoda HOM05D003670 ORTHO05D004767 1.5e-111 406.8 325 66.5
Nitab4.5_0005765g0040 Nicotiana tabacum HOM05D003670 ORTHO05D004767 1.9e-111 406.4 325 65.5
PSO675G6901 Papaver somniferum HOM05D003670 ORTHO05D004767 3.3e-111 405.6 326 65.6
Peaxi162Scf00006g00159 Petunia axillaris HOM05D003670 ORTHO05D004767 9.7e-111 404.1 319 67.1
ECA236G3562 Erigeron canadensis HOM05D003670 ORTHO05D004767 1.3e-110 403.7 265 77.4
MSTRG.14566 Avicennia marina HOM05D003670 ORTHO05D004767 1.7e-110 403.3 326 65.3
arahy.Tifrunner.gnm1.ann1.36F1KB Arachis hypogaea HOM05D003670 ORTHO05D004767 2.2e-110 402.9 328 67.4
THA.LOC104812362 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 2.8e-110 402.5 329 63.8
Duzib187G0441 Durio zibethinus HOM05D003670 ORTHO05D004767 3.7e-110 402.1 265 76.2
ClCG05G009800 Citrullus lanatus HOM05D003670 ORTHO05D000003 4.8e-110 401.7 303 68.0
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 6.3e-110 401.4 268 75.7
Carub.0001s1620 Capsella rubella HOM05D003670 ORTHO05D004767 8.2e-110 401.0 327 63.6
Thhalv10018699m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 2.4e-109 399.4 326 65.6
Aqoxy1G01484 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 3.1e-109 399.1 323 64.7
Aa31LG4G1790 Aethionema arabicum HOM05D003670 ORTHO05D004767 4.1e-109 398.7 318 65.4
Nn7g37780 Nelumbo nucifera HOM05D003670 ORTHO05D004767 4.1e-109 398.7 267 74.5
Oeu002796.1 Olea europaea HOM05D003670 ORTHO05D004767 5.3e-109 398.3 282 71.3
BcaB02g07206 Brassica carinata HOM05D003670 ORTHO05D004767 1.3e-107 393.7 325 64.6
arahy.Tifrunner.gnm1.ann1.YZ7E83 Arachis hypogaea HOM05D003670 ORTHO05D004767 2.2e-107 392.9 320 67.8
A07p27230 Brassica napus HOM05D003670 ORTHO05D004767 2.2e-107 392.9 326 65.3
BraA07t30367Z Brassica rapa HOM05D003670 ORTHO05D004767 2.2e-107 392.9 326 65.3
BolC6t38160H Brassica oleracea HOM05D003670 ORTHO05D004767 8.5e-107 391.0 326 65.3
AUR62037644 Chenopodium quinoa HOM05D003670 ORTHO05D004767 1.1e-106 390.6 327 63.3
AL2G39700 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 1.4e-106 390.2 290 67.6
BcaC08g45368 Brassica carinata HOM05D003670 ORTHO05D004767 7.2e-106 387.9 326 65.0
C06p30000 Brassica napus HOM05D003670 ORTHO05D004767 7.2e-106 387.9 326 65.0
unitig_578.g16333 Utricularia gibba HOM05D003670 ORTHO05D004767 9.4e-106 387.5 293 66.9
BcaB02g06624 Brassica carinata HOM05D003670 ORTHO05D004767 1.2e-105 387.1 327 63.0
BolC5t30186H Brassica oleracea HOM05D003670 ORTHO05D004767 2.7e-105 386.0 327 63.0
AT1G79230 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 3.6e-105 385.6 329 62.9
BcaC05g25571 Brassica carinata HOM05D003670 ORTHO05D004767 1.4e-104 383.6 327 62.7
CARHR072860 Cardamine hirsuta HOM05D003670 ORTHO05D004767 1.4e-104 383.6 265 72.1
THA.LOC104813608 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 1.4e-104 383.6 324 63.0
C05p14650 Brassica napus HOM05D003670 ORTHO05D004767 2.3e-104 382.9 327 62.7
Carub.0002s2610 Capsella rubella HOM05D003670 ORTHO05D004767 3.0e-104 382.5 326 62.6
Ah.10g033690 Amaranthus hybridus HOM05D003670 ORTHO05D004767 5.1e-104 381.7 336 61.3
BraA07t31943Z Brassica rapa HOM05D003670 ORTHO05D004767 5.1e-104 381.7 294 66.0
AUR62039184 Chenopodium quinoa HOM05D003670 ORTHO05D004767 5.1e-104 381.7 327 61.5
A07p44350 Brassica napus HOM05D003670 ORTHO05D004767 5.7e-103 378.3 294 65.6
EL10Ac2g03264 Beta vulgaris HOM05D003670 ORTHO05D004767 7.4e-103 377.9 325 61.5
Thhalv10007910m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 1.3e-102 377.1 264 70.8
BcaB05g25180 Brassica carinata HOM05D003670 ORTHO05D004767 2.2e-102 376.3 266 72.6
BraA06t24401Z Brassica rapa HOM05D003670 ORTHO05D004767 1.8e-101 373.2 327 62.1
AL1G28600 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 4.1e-101 372.1 264 70.1
MSTRG.7076 Avicennia marina HOM05D003670 ORTHO05D004767 5.3e-101 371.7 318 60.4
Sopen02g023800 Solanum pennellii HOM05D003670 ORTHO05D004767 5.3e-101 371.7 265 70.9
A06p12380 Brassica napus HOM05D003670 ORTHO05D004767 9.1e-101 370.9 327 60.9
Solyc02g078990.4 Solanum lycopersicum HOM05D003670 ORTHO05D004767 1.5e-100 370.2 265 70.6
Oeu043724.2 Olea europaea HOM05D003670 ORTHO05D004767 1.7e-99 366.7 269 69.9
BolC6t40330H Brassica oleracea HOM05D003670 ORTHO05D004767 1.4e-98 363.6 257 70.4
C06p53140 Brassica napus HOM05D003670 ORTHO05D004767 3.2e-98 362.5 244 73.0
Zm00001eb031400 Zea mays HOM05D003670 ORTHO05D004767 3.2e-98 362.5 267 69.3
HPP92_013192 Vanilla planifolia HOM05D003670 ORTHO05D004767 5.5e-98 361.7 324 59.0
Os12g0608600 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 2.1e-97 359.8 253 71.1
Sp1g14610 Schrenkiella parvula HOM05D003670 ORTHO05D004767 6.1e-97 358.2 266 67.3
Actinidia12766 Actinidia chinensis HOM05D003670 ORTHO05D004767 1.8e-96 356.7 253 71.9
Aa31LG7G1000 Aethionema arabicum HOM05D003670 ORTHO05D004767 8.8e-96 354.4 265 66.0
AT1G16460 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 4.4e-95 352.1 264 67.8
SGA_v2.0_scaffold186G40197 Striga asiatica HOM05D003670 ORTHO05D004767 3.1e-93 345.9 253 67.2
BcaC08g47490 Brassica carinata HOM05D003670 ORTHO05D004767 7.0e-93 344.7 328 58.8
QL04p088965 Quercus lobata HOM05D003670 ORTHO05D004767 7.7e-92 341.3 219 79.5
unitig_8.g4750 Utricularia gibba HOM05D003670 ORTHO05D004767 4.7e-89 332.0 326 56.1
SEGI_21826 Sequoiadendron giganteum HOM05D003670 ORTHO05D004767 1.8e-88 330.1 288 59.4
Rhsim05G0210500 Rhododendron simsii HOM05D003670 ORTHO05D004767 7.5e-87 324.7 249 67.9
DCAR_016837 Daucus carota HOM05D003670 ORTHO05D004767 5.9e-84 315.1 247 62.8
CDE06G2006 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 1.3e-83 313.9 233 66.1
Cpa.g.sc34.17 Carica papaya HOM05D003670 ORTHO05D004767 4.1e-77 292.4 206 72.8
Os02g0167100 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 1.6e-76 290.4 249 55.0
AagrBONN_evm.TU.Sc2ySwM_344.5346 Anthoceros agrestis HOM05D003670 ORTHO05D004767 3.8e-75 285.8 252 57.1
Mapoly0058s0078 Marchantia polymorpha HOM05D003670 ORTHO05D004767 9.5e-74 281.2 265 53.2
Zm00001eb207410 Zea mays HOM05D003670 ORTHO05D004767 3.6e-73 279.3 252 54.8
CDE02G0962 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 4.0e-72 275.8 233 61.4
HPP92_013209 Vanilla planifolia HOM05D003670 ORTHO05D004767 2.8e-70 269.6 304 49.7
SMO119G0061 Selaginella moellendorffii HOM05D003670 ORTHO05D004767 4.9e-70 268.9 240 56.7
Pp3c9_17670 Physcomitrium patens HOM05D003670 ORTHO05D004767 1.6e-65 253.8 281 48.4
RcHm_v2.0_Chr5g0024731 Rosa chinensis HOM05D003670 ORTHO05D004767 1.5e-63 247.3 201 70.1
MD05G1228600 Malus domestica HOM05D003670 ORTHO05D004767 2.0e-60 236.9 171 74.3
C02p36310 Brassica napus HOM05D003670 ORTHO05D004767 5.8e-55 218.8 192 62.0
FAN16G2550 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.3e-51 207.6 145 73.8
MD05G1228700 Malus domestica HOM05D003670 ORTHO05D004767 5.1e-51 205.7 143 72.7
Cre13.g607050 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D004767 1.4e-45 187.6 271 41.3
Hma1.2p1_0269F.1_g107810 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 2.4e-45 186.8 153 66.0
MCO09G588 Micromonas commoda HOM05D003670 ORTHO05D004767 4.1e-45 186.0 252 43.3
Aqoxy1G03000 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 5.4e-45 185.7 114 78.1
CBR_g17038 Chara braunii HOM05D003670 ORTHO05D004767 5.6e-42 175.6 302 36.4
PRCOL_00006295 Prasinoderma coloniale HOM05D003670 ORTHO05D004767 4.0e-40 169.5 239 41.4
A02p22680 Brassica napus HOM05D003670 ORTHO05D004767 2.0e-39 167.2 277 40.4
BolC1t01654H Brassica oleracea HOM05D003670 ORTHO05D004767 4.9e-38 162.5 121 70.2
BcaC01g00674 Brassica carinata HOM05D003670 ORTHO05D004767 3.2e-37 159.8 99 80.8
C01p17180 Brassica napus HOM05D003670 ORTHO05D004767 4.2e-37 159.5 121 69.4
C03p82980 Brassica napus HOM05D003670 ORTHO05D004767 7.1e-37 158.7 94 83.0
BcaC04g18607 Brassica carinata HOM05D003670 ORTHO05D004767 3.5e-36 156.4 99 78.8
BolC9t58925H Brassica oleracea HOM05D003670 ORTHO05D004767 3.5e-36 156.4 121 67.8
CAN.G891.1 Capsicum annuum HOM05D003670 ORTHO05D004767 3.0e-35 153.3 94 79.8
QL04p088979 Quercus lobata HOM05D003670 ORTHO05D004767 9.6e-34 148.3 99 76.8
Oeu010650.2 Olea europaea HOM05D003670 ORTHO05D004767 4.0e-32 142.9 97 78.4
BolC7t42971H Brassica oleracea HOM05D003670 ORTHO05D004767 4.8e-25 119.4 123 55.3
Cfa026738 Carpinus fangiana HOM05D003670 ORTHO05D004767 4.0e-24 116.3 240 35.8
BcaC06g34801 Brassica carinata HOM05D003670 ORTHO05D004767 5.3e-24 115.9 99 65.7
Lsat_1_v5_gn_4_93521 Lactuca sativa HOM05D003670 ORTHO05D004767 1.3e-19 101.3 66 74.2
BcaC03g15876 Brassica carinata HOM05D003670 ORTHO05D020012 6.2e-17 92.4 65 66.2
Solyc06g009850.3 Solanum lycopersicum HOM05D003670 ORTHO05D014971 3.8e-14 83.2 196 34.2
Mapoly0032s0014 Marchantia polymorpha HOM05D003670 ORTHO05D031137 2.1e-12 77.4 264 25.8
BcaC02g07679 Brassica carinata HOM05D003670 ORTHO05D014971 6.0e-12 75.9 41 85.4
AagrBONN_evm.TU.Sc2ySwM_117.2139 Anthoceros agrestis HOM05D003670 ORTHO05D031137 1.0e-11 75.1 279 30.8
BcaC05g28269 Brassica carinata HOM05D003670 ORTHO05D014971 2.5e-10 70.5 39 84.6
Lsat_1_v5_gn_8_160501 Lactuca sativa HOM05D003670 ORTHO05D002209 1.2e-07 61.6 33 87.9
Hma1.2p1_1039F.1_g250810 Hydrangea macrophylla HOM05D001854 ORTHO05D001800 4.5e-07 59.7 39 69.2
Cre01.g008891 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D031137 2.9e-06 57.0 58 41.4


User provided reference genes

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