Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07774 Corylus avellana HOM05D003079 ORTHO05D003461 4.0e-53 211.5 130 100.0
Haze_20425 Corylus avellana HOM05D003079 ORTHO05D003461 6.6e-32 141.0 89 85.4
Haze_09917 Corylus avellana HOM05D003079 ORTHO05D003461 1.9e-26 122.9 71 91.5
Thecc.07G001500 Theobroma cacao HOM05D003079 ORTHO05D003461 2.9e-19 99.0 71 74.6
COL.COLO4_07791 Corchorus olitorius HOM05D003079 ORTHO05D003461 4.9e-19 98.2 72 70.8
TWI39G1230 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 4.9e-19 98.2 72 69.4
TWI14G0136 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 3.2e-18 95.5 72 68.1
QL08p000493 Quercus lobata HOM05D003079 ORTHO05D003461 5.4e-18 94.7 68 76.5
Cpa.g.sc12.64 Carica papaya HOM05D003079 ORTHO05D003461 1.2e-17 93.6 67 73.1
Hma1.2p1_0193F.1_g084340 Hydrangea macrophylla HOM05D003079 ORTHO05D003461 4.6e-17 91.7 69 71.0
TWI38G1795 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 4.6e-17 91.7 72 65.3
Haze_23128 Corylus avellana HOM05D003079 ORTHO05D003461 6.0e-17 91.3 75 70.7
Manes.05G204700 Manihot esculenta HOM05D003079 ORTHO05D003461 2.3e-16 89.4 88 58.0
Potri.001G472000 Populus trichocarpa HOM05D003079 ORTHO05D003461 3.0e-16 89.0 71 66.2
SalBow8G1693 Salvia bowleyana HOM05D003079 ORTHO05D003461 3.0e-16 89.0 78 61.5
Duzib213G0264 Durio zibethinus HOM05D003079 ORTHO05D003461 5.1e-16 88.2 67 70.1
MELO3C014061.2 Cucumis melo HOM05D003079 ORTHO05D003461 6.6e-16 87.8 68 70.6
CsaV3_3G003800 Cucumis sativus L. HOM05D003079 ORTHO05D003461 6.6e-16 87.8 68 70.6
Sed0022199 Sechium edule HOM05D003079 ORTHO05D003461 6.6e-16 87.8 70 68.6
Ciclev10007777m.g Citrus clementina HOM05D003079 ORTHO05D003461 8.7e-16 87.4 66 72.7
Dinv19642 Davidia involucrata HOM05D003079 ORTHO05D003461 1.1e-15 87.0 68 72.1
Potri.011G169000 Populus trichocarpa HOM05D003079 ORTHO05D003461 1.1e-15 87.0 76 63.2
Duzib268G0697 Durio zibethinus HOM05D003079 ORTHO05D003461 1.5e-15 86.7 67 68.7
ClCG00G001200 Citrullus lanatus HOM05D003079 ORTHO05D003461 2.5e-15 85.9 68 69.1
ClCG10G003820 Citrullus lanatus HOM05D003079 ORTHO05D003461 2.5e-15 85.9 68 69.1
ClCG10G003930 Citrullus lanatus HOM05D003079 ORTHO05D003461 2.5e-15 85.9 68 69.1
PGSC0003DMG400022146 Solanum tuberosum HOM05D003079 ORTHO05D003461 2.5e-15 85.9 73 65.8
Sopen07g034350 Solanum pennellii HOM05D003079 ORTHO05D003461 3.3e-15 85.5 95 56.8
CiPaw.12G142800 Carya illinoinensis HOM05D003079 ORTHO05D003461 5.6e-15 84.7 70 72.9
CSS0022300 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 1.3e-14 83.6 88 58.0
CSS0035812 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 1.3e-14 83.6 88 58.0
Sed0005838 Sechium edule HOM05D003079 ORTHO05D003461 1.6e-14 83.2 74 63.5
CiPaw.12G142700 Carya illinoinensis HOM05D003079 ORTHO05D003461 2.1e-14 82.8 70 71.4
Lj1A901G36 Lonicera japonica HOM05D003079 ORTHO05D003461 2.1e-14 82.8 66 69.7
Nitab4.5_0009408g0020 Nicotiana tabacum HOM05D003079 ORTHO05D003461 2.1e-14 82.8 68 64.7
TAR611G0001 Trochodendron aralioides HOM05D003079 ORTHO05D003461 2.1e-14 82.8 74 62.2
RcHm_v2.0_Chr5g0074601 Rosa chinensis HOM05D003079 ORTHO05D003461 3.6e-14 82.0 63 69.8
Gohir.A13G128400 Gossypium hirsutum HOM05D003079 ORTHO05D003461 4.8e-14 81.6 89 52.8
Nitab4.5_0000152g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 6.2e-14 81.3 68 64.7
Actinidia30350 Actinidia chinensis HOM05D003079 ORTHO05D003461 1.1e-13 80.5 68 61.8
CAN.G623.75 Capsicum annuum HOM05D003079 ORTHO05D003461 1.1e-13 80.5 77 61.0
Gohir.D13G131800 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.1e-13 80.5 89 51.7
Prupe.6G035500 Prunus persica HOM05D003079 ORTHO05D003461 1.4e-13 80.1 102 48.0
Gorai.013G147800 Gossypium raimondii HOM05D003079 ORTHO05D003461 1.8e-13 79.7 89 51.7
PGR083G0768 Punica granatum HOM05D003079 ORTHO05D003461 1.8e-13 79.7 70 64.3
Eucgr.F03644 Eucalyptus grandis HOM05D003079 ORTHO05D003461 2.4e-13 79.3 69 65.2
Sabra11G0137800 Salix brachista HOM05D003079 ORTHO05D003461 2.4e-13 79.3 76 59.2
FAN21G1152 Fragaria x ananassa HOM05D003079 ORTHO05D003461 3.1e-13 79.0 67 65.7
Cc05_g15720 Coffea canephora HOM05D003079 ORTHO05D003461 4.0e-13 78.6 89 57.3
Gohir.A11G276200 Gossypium hirsutum HOM05D003079 ORTHO05D003461 5.3e-13 78.2 66 65.2
Gohir.D11G286600 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.2e-12 77.0 66 63.6
Gorai.007G310000 Gossypium raimondii HOM05D003079 ORTHO05D003461 1.2e-12 77.0 66 63.6
FAN16G0740 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.5e-12 76.6 67 62.7
vmacro11641 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 1.5e-12 76.6 73 54.8
MSTRG.13045 Avicennia marina HOM05D003079 ORTHO05D003461 2.0e-12 76.3 103 48.5
Nn1g07629 Nelumbo nucifera HOM05D003079 ORTHO05D003461 2.0e-12 76.3 67 61.2
Actinidia31529 Actinidia chinensis HOM05D003079 ORTHO05D003461 2.6e-12 75.9 68 58.8
MD11G1046100 Malus domestica HOM05D003079 ORTHO05D003461 3.4e-12 75.5 72 56.9
Peaxi162Scf00232g00614 Petunia axillaris HOM05D003079 ORTHO05D003461 5.8e-12 74.7 53 79.2
FvH4_3g41590 Fragaria vesca HOM05D003079 ORTHO05D003461 9.9e-12 73.9 63 66.7
FAN11G0995 Fragaria x ananassa HOM05D003079 ORTHO05D003461 9.9e-12 73.9 63 66.7
MD03G1043100 Malus domestica HOM05D003079 ORTHO05D003461 9.9e-12 73.9 73 54.8
Nitab4.5_0003570g0050 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.7e-11 73.2 71 54.9
TAR626G0479 Trochodendron aralioides HOM05D003079 ORTHO05D003461 1.7e-11 73.2 70 57.1
Atru.chr2.3897 Acer truncatum HOM05D003079 ORTHO05D003461 3.8e-11 72.0 63 65.1
GSVIVG01014846001 Vitis vinifera HOM05D003079 ORTHO05D003461 3.8e-11 72.0 46 84.8
Duzib170G0955 Durio zibethinus HOM05D003079 ORTHO05D003461 4.9e-11 71.6 71 56.3
Oeu005543.1 Olea europaea HOM05D003079 ORTHO05D003461 6.4e-11 71.2 70 60.0
Rhsim04G0008000 Rhododendron simsii HOM05D003079 ORTHO05D003461 6.4e-11 71.2 65 63.1
Nitab4.5_0002216g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.1e-10 70.5 71 53.5
DCAR_013756 Daucus carota HOM05D003079 ORTHO05D003461 1.4e-10 70.1 48 77.1
Migut.M01581 Erythranthe guttata HOM05D003079 ORTHO05D003461 1.4e-10 70.1 73 58.9
Lj8C183T12 Lonicera japonica HOM05D003079 ORTHO05D003461 1.4e-10 70.1 62 66.1
Oeu062673.1 Olea europaea HOM05D003079 ORTHO05D003461 1.4e-10 70.1 70 55.7
TAR627G0159 Trochodendron aralioides HOM05D003079 ORTHO05D003461 1.4e-10 70.1 71 53.5
CSS0018146 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 1.9e-10 69.7 62 62.9
Nitab4.5_0000611g0170 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.9e-10 69.7 68 60.3
Nitab4.5_0001622g0150 Nicotiana tabacum HOM05D003079 ORTHO05D003461 2.4e-10 69.3 68 60.3
Oeu052026.1 Olea europaea HOM05D003079 ORTHO05D003461 3.2e-10 68.9 72 52.8
Rhsim06G0235200 Rhododendron simsii HOM05D003079 ORTHO05D003461 3.2e-10 68.9 69 55.1
Sp6g18060 Schrenkiella parvula HOM05D003079 ORTHO05D003461 3.2e-10 68.9 70 60.0
AL8G31840 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 9.3e-10 67.4 89 53.9
Aa31LG3G12120 Aethionema arabicum HOM05D003079 ORTHO05D003461 1.2e-09 67.0 70 57.1
Dinv40917 Davidia involucrata HOM05D003079 ORTHO05D003461 2.7e-09 65.9 43 83.7
Migut.H01709 Erythranthe guttata HOM05D003079 ORTHO05D003461 2.7e-09 65.9 71 60.6
Glyma.04G113700 Glycine max HOM05D003079 ORTHO05D003461 2.7e-09 65.9 69 65.2
vmacro09798 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 4.6e-09 65.1 66 54.5
AT5G56210 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 7.8e-09 64.3 70 58.6
Carub.0008s1653 Capsella rubella HOM05D003079 ORTHO05D003461 1.0e-08 63.9 70 55.7
PGSC0003DMG400008693 Solanum tuberosum HOM05D003079 ORTHO05D003461 1.0e-08 63.9 68 58.8
CAN.G492.58 Capsicum annuum HOM05D003079 ORTHO05D003461 1.3e-08 63.5 69 56.5
CANSAT11G2157 Cannabis sativa HOM05D003079 ORTHO05D003461 1.7e-08 63.2 70 57.1
Glyma.06G321400 Glycine max HOM05D003079 ORTHO05D003461 1.7e-08 63.2 69 63.8
SGA_v2.0_scaffold92G28159 Striga asiatica HOM05D003079 ORTHO05D003461 2.3e-08 62.8 83 48.2
THA.LOC104811703 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 2.3e-08 62.8 70 54.3
MBI15_g44396_MAGBIO Magnolia biondii HOM05D003079 ORTHO05D003461 3.0e-08 62.4 66 51.5
Sc03g0011780 Simmondsia chinensis HOM05D003079 ORTHO05D003461 3.0e-08 62.4 67 55.2
Sopen10g001680 Solanum pennellii HOM05D003079 ORTHO05D003461 5.1e-08 61.6 68 57.4
Phvul.L001609 Phaseolus vulgaris HOM05D003079 ORTHO05D003461 8.7e-08 60.8 70 58.6
MSTRG.16132 Avicennia marina HOM05D003079 ORTHO05D003461 1.5e-07 60.1 71 45.1
Thhalv10013313m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 9.6e-07 57.4 54 66.7
PSO063G6668 Papaver somniferum HOM05D003079 ORTHO05D003461 9.6e-07 57.4 66 50.0
Hund22967 Selenicereus undatus HOM05D003079 ORTHO05D003461 9.6e-07 57.4 69 53.6
PSO782G1655 Papaver somniferum HOM05D003079 ORTHO05D003461 1.3e-06 57.0 66 50.0
VMungo1080G0483 Vigna mungo HOM05D003079 ORTHO05D003461 1.6e-06 56.6 58 65.5
SGA_v2.0_scaffold186G40233 Striga asiatica HOM05D003079 ORTHO05D003461 2.1e-06 56.2 40 67.5
DCAR_017612 Daucus carota HOM05D003079 ORTHO05D003461 3.6e-06 55.5 71 52.1


User provided reference genes

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