Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07739 Corylus avellana HOM05D005465 ORTHO05D006612 1.5e-68 262.7 126 100.0
Cfa019348 Carpinus fangiana HOM05D005465 ORTHO05D006612 1.5e-65 252.7 126 95.2
CiPaw.11G054700 Carya illinoinensis HOM05D005465 ORTHO05D006612 8.9e-58 226.9 126 84.1
CsaV3_1G006060 Cucumis sativus L. HOM05D005465 ORTHO05D006612 2.9e-53 211.8 125 79.2
Sed0023287 Sechium edule HOM05D005465 ORTHO05D006612 3.3e-52 208.4 125 76.8
MELO3C002037.2 Cucumis melo HOM05D005465 ORTHO05D006612 5.6e-52 207.6 125 77.6
Gohir.D03G097000 Gossypium hirsutum HOM05D005465 ORTHO05D006612 9.5e-52 206.8 124 77.4
Gorai.003G101800 Gossypium raimondii HOM05D005465 ORTHO05D006612 9.5e-52 206.8 124 77.4
TAR622G0582 Trochodendron aralioides HOM05D005465 ORTHO05D006612 1.2e-51 206.5 125 76.0
Gohir.A03G070600 Gossypium hirsutum HOM05D005465 ORTHO05D006612 2.1e-51 205.7 124 76.6
Manes.06G083500 Manihot esculenta HOM05D005465 ORTHO05D006612 2.1e-51 205.7 120 79.2
ClCG04G011730 Citrullus lanatus HOM05D005465 ORTHO05D006612 6.2e-51 204.1 125 76.0
Duzib205G0879 Durio zibethinus HOM05D005465 ORTHO05D006612 6.2e-51 204.1 124 75.8
Thecc.03G103400 Theobroma cacao HOM05D005465 ORTHO05D006612 2.3e-50 202.2 124 75.8
Duzib084G0509 Durio zibethinus HOM05D005465 ORTHO05D006612 1.5e-49 199.5 124 74.2
COL.COLO4_24335 Corchorus olitorius HOM05D005465 ORTHO05D006612 2.6e-49 198.7 124 74.2
TAR371G0638 Trochodendron aralioides HOM05D005465 ORTHO05D006612 2.6e-49 198.7 125 75.2
RcHm_v2.0_Chr7g0183221 Rosa chinensis HOM05D005465 ORTHO05D006612 4.4e-49 198.0 124 77.4
Nn4g23446 Nelumbo nucifera HOM05D005465 ORTHO05D006612 5.8e-49 197.6 119 76.5
Prupe.5G206300 Prunus persica HOM05D005465 ORTHO05D006612 2.2e-48 195.7 126 74.6
Hma1.2p1_0481F.1_g162260 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 2.9e-48 195.3 124 76.6
Hma1.2p1_0481F.1_g162270 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 2.9e-48 195.3 124 76.6
Nn3g17466 Nelumbo nucifera HOM05D005465 ORTHO05D006612 2.9e-48 195.3 124 72.6
CSS0002198 Camellia sinensis var. sinensis HOM05D005465 ORTHO05D006612 4.9e-48 194.5 125 72.8
Glyma.17G079700 Glycine max HOM05D005465 ORTHO05D006612 4.9e-48 194.5 127 74.8
Actinidia26253 Actinidia chinensis HOM05D005465 ORTHO05D006612 6.4e-48 194.1 125 74.4
VMungo1215G2862 Vigna mungo HOM05D005465 ORTHO05D006612 1.9e-47 192.6 126 76.2
Cpa.g.sc746.2 Carica papaya HOM05D005465 ORTHO05D006612 2.4e-47 192.2 127 73.2
FvH4_5g13720 Fragaria vesca HOM05D005465 ORTHO05D006612 3.2e-47 191.8 124 74.2
FAN18G4042 Fragaria x ananassa HOM05D005465 ORTHO05D006612 3.2e-47 191.8 124 74.2
Glyma.05G020100 Glycine max HOM05D005465 ORTHO05D006612 3.2e-47 191.8 127 73.2
QL10p019840 Quercus lobata HOM05D005465 ORTHO05D006612 4.1e-47 191.4 123 71.5
ECA232G0503 Erigeron canadensis HOM05D005465 ORTHO05D006612 5.4e-47 191.0 124 74.2
Gorai.006G268200 Gossypium raimondii HOM05D005465 ORTHO05D006612 1.6e-46 189.5 124 71.0
Rhsim08G0075200 Rhododendron simsii HOM05D005465 ORTHO05D006612 2.7e-46 188.7 123 74.8
arahy.Tifrunner.gnm1.ann1.13IMLW Arachis hypogaea HOM05D005465 ORTHO05D006612 3.5e-46 188.3 127 71.7
DCAR_011037 Daucus carota HOM05D005465 ORTHO05D006612 4.6e-46 188.0 125 74.4
FAN13G0353 Fragaria x ananassa HOM05D005465 ORTHO05D006612 4.6e-46 188.0 124 72.6
Atru.chr9.555 Acer truncatum HOM05D005465 ORTHO05D006612 1.3e-45 186.4 130 71.5
Aqoxy3G03677 Aquilegia oxysepala HOM05D005465 ORTHO05D006612 2.3e-45 185.7 122 68.0
MD06G1226100 Malus domestica HOM05D005465 ORTHO05D006612 2.3e-45 185.7 122 73.8
TWI81G0357 Tripterygium wilfordii HOM05D005465 ORTHO05D006612 3.9e-45 184.9 125 69.6
SGA_v2.0_scaffold4G02379 Striga asiatica HOM05D005465 ORTHO05D006612 6.6e-45 184.1 125 72.0
Lsat_1_v5_gn_4_171900 Lactuca sativa HOM05D005465 ORTHO05D006612 1.1e-44 183.3 124 69.4
PSO782G3842 Papaver somniferum HOM05D005465 ORTHO05D006612 1.1e-44 183.3 122 68.9
PGSC0003DMG400026569 Solanum tuberosum HOM05D005465 ORTHO05D006612 1.1e-44 183.3 125 68.8
Phvul.003G183800 Phaseolus vulgaris HOM05D005465 ORTHO05D006612 1.5e-44 183.0 126 72.2
Nitab4.5_0000212g0270 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.9e-44 182.6 125 68.8
Peaxi162Scf00991g00013 Petunia axillaris HOM05D005465 ORTHO05D006612 2.5e-44 182.2 125 68.0
Solyc10g082064.1 Solanum lycopersicum HOM05D005465 ORTHO05D006612 3.3e-44 181.8 125 68.8
MD14G1213000 Malus domestica HOM05D005465 ORTHO05D006612 5.6e-44 181.0 122 71.3
PSO063G4354 Papaver somniferum HOM05D005465 ORTHO05D006612 7.3e-44 180.6 122 68.9
THA.LOC104801135 Tarenaya hassleriana HOM05D005465 ORTHO05D006612 9.5e-44 180.3 126 69.8
SGA_v2.0_scaffold52G19131 Striga asiatica HOM05D005465 ORTHO05D006612 2.1e-43 179.1 125 68.8
Nitab4.5_0008370g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 2.8e-43 178.7 122 69.7
Nitab4.5_0010535g0020 Nicotiana tabacum HOM05D005465 ORTHO05D006612 2.8e-43 178.7 125 66.4
Lalb_Chr13g0302801 Lupinus albus HOM05D005465 ORTHO05D006612 4.7e-43 177.9 122 69.7
Ca_21764_v3 Cicer arietinum L. HOM05D005465 ORTHO05D006612 8.1e-43 177.2 125 67.2
Ciclev10022497m.g Citrus clementina HOM05D005465 ORTHO05D006612 8.1e-43 177.2 126 68.3
Psat4g047600 Pisum sativum HOM05D005465 ORTHO05D006612 1.1e-42 176.8 125 66.4
TPR.G2036 Trifolium pratense HOM05D005465 ORTHO05D006612 1.4e-42 176.4 125 64.8
Lj4g0014841 Lotus japonicus HOM05D005465 ORTHO05D006612 1.8e-42 176.0 127 72.4
Cc07_g04290 Coffea canephora HOM05D005465 ORTHO05D006612 3.1e-42 175.3 121 66.9
MBI16_g10835_MAGBIO Magnolia biondii HOM05D005465 ORTHO05D006612 3.1e-42 175.3 122 69.7
Medtr4g109650 Medicago truncatula HOM05D005465 ORTHO05D006612 3.1e-42 175.3 125 65.6
Nitab4.5_0005910g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 3.1e-42 175.3 126 66.7
AL6G18430 Arabidopsis lyrata HOM05D005465 ORTHO05D006612 4.0e-42 174.9 126 65.9
Ah.10g032300 Amaranthus hybridus HOM05D005465 ORTHO05D006612 5.2e-42 174.5 125 67.2
AT5G08060 Arabidopsis thaliana HOM05D005465 ORTHO05D006612 1.2e-41 173.3 126 65.9
Eucgr.K02534 Eucalyptus grandis HOM05D005465 ORTHO05D006612 1.2e-41 173.3 121 64.5
Aa31LG3G18480 Aethionema arabicum HOM05D005465 ORTHO05D006612 2.0e-41 172.6 124 67.7
Carub.0006s0695 Capsella rubella HOM05D005465 ORTHO05D006612 2.0e-41 172.6 124 67.7
CARHR205120 Cardamine hirsuta HOM05D005465 ORTHO05D006612 2.0e-41 172.6 127 66.9
A10p28580 Brassica napus HOM05D005465 ORTHO05D006612 2.6e-41 172.2 126 65.9
BolC9t59633H Brassica oleracea HOM05D005465 ORTHO05D006612 2.6e-41 172.2 126 65.9
Sc14g0006350 Simmondsia chinensis HOM05D005465 ORTHO05D006612 2.6e-41 172.2 122 68.9
BcaB08g37294 Brassica carinata HOM05D005465 ORTHO05D006612 3.4e-41 171.8 126 65.1
C09p68870 Brassica napus HOM05D005465 ORTHO05D006612 3.4e-41 171.8 126 65.1
Thhalv10015010m.g Eutrema salsugineum HOM05D005465 ORTHO05D006612 5.8e-41 171.0 127 66.9
Sopen02g033620 Solanum pennellii HOM05D005465 ORTHO05D006612 5.8e-41 171.0 125 64.8
BcaB01g05639 Brassica carinata HOM05D005465 ORTHO05D006612 7.5e-41 170.6 127 64.6
BraA10t44907Z Brassica rapa HOM05D005465 ORTHO05D006612 7.5e-41 170.6 126 65.1
AUR62038681 Chenopodium quinoa HOM05D005465 ORTHO05D006612 7.5e-41 170.6 121 66.1
AUR62018194 Chenopodium quinoa HOM05D005465 ORTHO05D006612 9.8e-41 170.2 121 66.9
Potri.004G123700 Populus trichocarpa HOM05D005465 ORTHO05D006612 1.7e-40 169.5 126 64.3
PGSC0003DMG400001360 Solanum tuberosum HOM05D005465 ORTHO05D006612 1.7e-40 169.5 125 64.8
PGR044G0931 Punica granatum HOM05D005465 ORTHO05D006612 2.2e-40 169.1 126 66.7
unitig_899.g15102 Utricularia gibba HOM05D005465 ORTHO05D006612 2.9e-40 168.7 122 68.0
Migut.H00618 Erythranthe guttata HOM05D005465 ORTHO05D006612 3.7e-40 168.3 125 63.2
Solyc02g088930.4 Solanum lycopersicum HOM05D005465 ORTHO05D006612 6.4e-40 167.5 124 63.7
Sp6g34890 Schrenkiella parvula HOM05D005465 ORTHO05D006612 1.1e-39 166.8 127 63.8
Oeu062167.1 Olea europaea HOM05D005465 ORTHO05D006612 2.4e-39 165.6 125 67.2
Dinv34936 Davidia involucrata HOM05D005465 ORTHO05D006612 3.2e-39 165.2 103 75.7
Zm00001eb370380 Zea mays HOM05D005465 ORTHO05D006612 4.1e-39 164.9 128 60.9
EL10Ac2g03144 Beta vulgaris HOM05D005465 ORTHO05D006612 5.4e-39 164.5 122 64.8
SHI17457 Sapria himalayana HOM05D005465 ORTHO05D006612 7.1e-39 164.1 118 66.1
Zm00001eb152340 Zea mays HOM05D005465 ORTHO05D006612 9.2e-39 163.7 123 62.6
Sabra04G0090300 Salix brachista HOM05D005465 ORTHO05D006612 1.2e-38 163.3 126 62.7
A03p03570 Brassica napus HOM05D005465 ORTHO05D006612 2.1e-38 162.5 126 61.9
BraA03t09707Z Brassica rapa HOM05D005465 ORTHO05D006612 2.1e-38 162.5 126 61.9
DCAR_025436 Daucus carota HOM05D005465 ORTHO05D006612 2.1e-38 162.5 126 63.5
PGSC0003DMG400035500 Solanum tuberosum HOM05D005465 ORTHO05D006612 2.7e-38 162.2 119 65.5
Os01g0763300 Oryza sativa ssp. japonica HOM05D005465 ORTHO05D006612 6.0e-38 161.0 127 59.1
Peaxi162Scf00166g00046 Petunia axillaris HOM05D005465 ORTHO05D006612 1.0e-37 160.2 121 61.2
Gohir.D09G244200 Gossypium hirsutum HOM05D005465 ORTHO05D006612 2.3e-37 159.1 124 64.5
Rhsim10G0048500 Rhododendron simsii HOM05D005465 ORTHO05D006612 3.0e-37 158.7 125 60.0
BolC3t12939H Brassica oleracea HOM05D005465 ORTHO05D006612 3.9e-37 158.3 126 60.3
BraA02t04941Z Brassica rapa HOM05D005465 ORTHO05D006612 3.9e-37 158.3 130 60.0
Rhsim10G0047800 Rhododendron simsii HOM05D005465 ORTHO05D006612 6.6e-37 157.5 125 59.2
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 9.9e-33 143.7 97 66.0
Rhsim10G0050100 Rhododendron simsii HOM05D005465 ORTHO05D006612 2.9e-32 142.1 125 56.8
BcaB05g21584 Brassica carinata HOM05D005465 ORTHO05D006612 4.1e-31 138.3 128 53.9
Rhsim10G0048300 Rhododendron simsii HOM05D005465 ORTHO05D006612 4.1e-31 138.3 125 56.0
Hma1.2p1_0029F.1_g018040 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 6.2e-27 124.4 80 71.2
Gohir.A09G243500 Gossypium hirsutum HOM05D005465 ORTHO05D006612 3.1e-26 122.1 77 68.8
EL10Ac5g11896 Beta vulgaris HOM05D005465 ORTHO05D006612 4.0e-26 121.7 94 64.9
Sopen02g016050 Solanum pennellii HOM05D005465 ORTHO05D006612 7.6e-25 117.5 125 48.8
Sopen10g022010 Solanum pennellii HOM05D005465 ORTHO05D006612 1.7e-24 116.3 125 51.2
BcaB08g37291 Brassica carinata HOM05D005465 ORTHO05D006612 3.8e-24 115.2 86 62.8
Sopen10g012570 Solanum pennellii HOM05D005465 ORTHO05D006612 6.6e-21 104.4 113 47.8
FAN08G0639 Fragaria x ananassa HOM05D005465 ORTHO05D006612 9.6e-20 100.5 66 66.7
Sopen10g006060 Solanum pennellii HOM05D005465 ORTHO05D006612 9.6e-20 100.5 113 46.9
TAR622G1303 Trochodendron aralioides HOM05D005465 ORTHO05D006612 1.1e-18 97.1 68 63.2
BcaB01g05638 Brassica carinata HOM05D005465 ORTHO05D006612 1.4e-18 96.7 72 66.7
SEGI_31914 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 3.1e-18 95.5 116 44.8
Actinidia17587 Actinidia chinensis HOM05D005465 ORTHO05D006612 1.2e-17 93.6 67 64.2
SEGI_27681 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 7.6e-17 90.9 114 43.0
SMO263G0026 Selaginella moellendorffii HOM05D005465 ORTHO05D006612 4.6e-14 81.6 126 34.1
EL10Ac5g12104 Beta vulgaris HOM05D005465 ORTHO05D006612 1.7e-13 79.7 68 55.9
Mapoly0019s0055 Marchantia polymorpha HOM05D005465 ORTHO05D006612 3.9e-13 78.6 64 50.0
Lsat_1_v5_gn_4_50580 Lactuca sativa HOM05D005465 ORTHO05D006612 1.1e-12 77.0 51 74.5
AagrBONN_evm.TU.Sc2ySwM_362.2833 Anthoceros agrestis HOM05D005465 ORTHO05D006612 7.4e-12 74.3 75 46.7
Pp3c16_5680 Physcomitrium patens HOM05D005465 ORTHO05D006612 6.2e-11 71.2 93 41.9
MCO16G501 Micromonas commoda HOM05D005465 ORTHO05D006612 9.0e-10 67.4 79 38.0
CBR_g37656 Chara braunii HOM05D005465 ORTHO05D006612 7.6e-09 64.3 112 32.1
Peaxi162Scf00991g00114 Petunia axillaris HOM05D005465 ORTHO05D006612 1.3e-08 63.5 124 34.7
Cre12.g484700 Chlamydomonas reinhardtii HOM05D005465 ORTHO05D006612 5.5e-07 58.2 66 42.4


User provided reference genes

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