Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07693 Corylus avellana HOM05D009211 ORTHO05D011170 1.7e-84 315.8 152 100.0
Cfa019310 Carpinus fangiana HOM05D009211 ORTHO05D011170 1.8e-73 279.3 140 96.4
QL10p018860 Quercus lobata HOM05D009211 ORTHO05D011170 1.5e-35 153.3 142 60.6
Atru.chr9.405 Acer truncatum HOM05D009211 ORTHO05D011170 1.7e-31 139.8 152 53.9
CiPaw.11G050900 Carya illinoinensis HOM05D009211 ORTHO05D011170 1.5e-30 136.7 134 56.0
Thecc.03G098100 Theobroma cacao HOM05D009211 ORTHO05D011170 2.7e-29 132.5 134 48.5
Actinidia04839 Actinidia chinensis HOM05D009211 ORTHO05D011170 9.8e-27 124.0 149 50.3
FAN08G0220 Fragaria x ananassa HOM05D009211 ORTHO05D011170 2.8e-26 122.5 153 49.0
FAN18G1019 Fragaria x ananassa HOM05D009211 ORTHO05D011170 4.8e-26 121.7 113 56.6
Prupe.5G202900 Prunus persica HOM05D009211 ORTHO05D011170 1.1e-25 120.6 121 53.7
FAN13G1505 Fragaria x ananassa HOM05D009211 ORTHO05D011170 1.2e-24 117.1 113 54.9
FvH4_5g14220 Fragaria vesca HOM05D009211 ORTHO05D011170 4.5e-24 115.2 113 54.0
COL.COLO4_22212 Corchorus olitorius HOM05D009211 ORTHO05D011170 1.3e-23 113.6 136 44.1
Potri.012G066250 Populus trichocarpa HOM05D009211 ORTHO05D011170 3.8e-23 112.1 153 41.2
CSS0047999 Camellia sinensis var. sinensis HOM05D009211 ORTHO05D011170 4.2e-22 108.6 148 41.9
Manes.06G086800 Manihot esculenta HOM05D009211 ORTHO05D011170 7.2e-22 107.8 154 44.2
Cpa.g.sc94.21 Carica papaya HOM05D009211 ORTHO05D011170 1.6e-21 106.7 145 42.1
Gorai.008G197300 Gossypium raimondii HOM05D009211 ORTHO05D011170 4.7e-21 105.1 143 42.0
Medtr4g109380 Medicago truncatula HOM05D009211 ORTHO05D011170 9.8e-19 97.4 153 43.1
TPR.G2006 Trifolium pratense HOM05D009211 ORTHO05D011170 1.7e-18 96.7 154 42.2
Aqoxy1G00314 Aquilegia oxysepala HOM05D009211 ORTHO05D011170 4.9e-18 95.1 124 43.5
Aqoxy3G00486 Aquilegia oxysepala HOM05D009211 ORTHO05D011170 7.0e-17 91.3 124 41.9
Lj4g0005212 Lotus japonicus HOM05D009211 ORTHO05D011170 1.2e-16 90.5 141 45.4
VMungo1215G2572 Vigna mungo HOM05D009211 ORTHO05D011170 5.9e-16 88.2 135 44.4
Glyma.17G077200 Glycine max HOM05D009211 ORTHO05D011170 7.8e-16 87.8 139 44.6
Phvul.003G185900 Phaseolus vulgaris HOM05D009211 ORTHO05D011170 2.3e-15 86.3 131 45.8
Migut.I00442 Erythranthe guttata HOM05D009211 ORTHO05D011170 2.5e-14 82.8 117 44.4
Gohir.A12G181250 Gossypium hirsutum HOM05D009211 ORTHO05D011170 3.3e-14 82.4 98 43.9
Ca_21787_v3 Cicer arietinum L. HOM05D009211 ORTHO05D011170 5.6e-14 81.6 131 44.3
Nitab4.5_0001688g0080 Nicotiana tabacum HOM05D009211 ORTHO05D011170 2.3e-12 76.3 110 40.9
CAN.G587.37 Capsicum annuum HOM05D035866 ORTHO05D011170 1.5e-11 73.6 105 43.8
Oeu038366.1 Olea europaea HOM05D009211 ORTHO05D011170 5.7e-11 71.6 96 45.8
Psat4g047880 Pisum sativum HOM05D009211 ORTHO05D011170 1.3e-10 70.5 74 55.4
DCAR_021511 Daucus carota HOM05D000113 ORTHO05D002571 7.0e-09 64.7 126 35.7
Sopen06g026830 Solanum pennellii HOM05D035866 ORTHO05D011170 3.0e-07 59.3 117 36.8
Solyc06g069540.1 Solanum lycopersicum HOM05D035866 ORTHO05D011170 1.5e-06 57.0 113 37.2
CsaV3_4G014680 Cucumis sativus L. HOM05D065616 ORTHO05D045016 4.3e-06 55.5 114 33.3
Aqoxy3G03588 Aquilegia oxysepala HOM05D009211 ORTHO05D011170 5.6e-06 55.1 133 33.1


User provided reference genes

Program Settings