Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07666 Corylus avellana HOM05D007878 ORTHO05D010022 2.3e-190 669.1 438 100.0
Cfa019282 Carpinus fangiana HOM05D007878 ORTHO05D010022 8.5e-132 474.6 501 61.5
Gohir.A03G068300 Gossypium hirsutum HOM05D007878 ORTHO05D010022 1.2e-80 304.7 443 45.4
Gohir.D03G094900 Gossypium hirsutum HOM05D007878 ORTHO05D010022 5.8e-80 302.4 443 45.4
Gorai.003G099100 Gossypium raimondii HOM05D007878 ORTHO05D010022 2.9e-79 300.1 443 45.1
CiPaw.11G048800 Carya illinoinensis HOM05D007878 ORTHO05D010022 1.3e-76 291.2 521 41.5
Thecc.03G095300 Theobroma cacao HOM05D007878 ORTHO05D010022 2.1e-74 283.9 542 38.7
Potri.015G061500 Populus trichocarpa HOM05D007878 ORTHO05D010022 1.3e-71 274.6 549 37.9
Dinv38757 Davidia involucrata HOM05D007878 ORTHO05D010022 1.4e-70 271.2 549 38.6
Atru.chr9.783 Acer truncatum HOM05D007878 ORTHO05D010022 6.6e-68 262.3 458 40.8
Duzib084G0698 Durio zibethinus HOM05D007878 ORTHO05D010022 1.1e-67 261.5 542 37.1
RcHm_v2.0_Chr7g0182231 Rosa chinensis HOM05D007878 ORTHO05D010022 1.5e-67 261.2 554 37.5
Prupe.5G199300 Prunus persica HOM05D007878 ORTHO05D010022 5.6e-67 259.2 564 37.4
TWI60G1109 Tripterygium wilfordii HOM05D007878 ORTHO05D010022 2.1e-66 257.3 533 37.7
FAN08G0929 Fragaria x ananassa HOM05D007878 ORTHO05D010022 2.8e-66 256.9 524 38.9
PGR083G0831 Punica granatum HOM05D007878 ORTHO05D010022 6.8e-65 252.3 542 37.5
TAR374G1173 Trochodendron aralioides HOM05D007878 ORTHO05D010022 6.8e-65 252.3 545 38.9
Manes.06G088500 Manihot esculenta HOM05D007878 ORTHO05D010022 2.0e-64 250.8 517 39.5
Actinidia04859 Actinidia chinensis HOM05D007878 ORTHO05D010022 3.4e-64 250.0 521 37.4
FAN13G2185 Fragaria x ananassa HOM05D007878 ORTHO05D010022 1.7e-63 247.7 556 36.9
Ciclev10024608m.g Citrus clementina HOM05D007878 ORTHO05D010022 2.9e-63 246.9 472 39.0
FAN18G1316 Fragaria x ananassa HOM05D007878 ORTHO05D010022 2.1e-61 240.7 556 36.3
Lj4g0012809 Lotus japonicus HOM05D007878 ORTHO05D010022 7.8e-61 238.8 423 40.2
MD14G1206000 Malus domestica HOM05D007878 ORTHO05D010022 5.1e-60 236.1 532 36.5
Cc04_g14870 Coffea canephora HOM05D007878 ORTHO05D010022 1.9e-59 234.2 498 36.7
Manes.14G082500 Manihot esculenta HOM05D007878 ORTHO05D010022 5.6e-59 232.6 545 35.4
CiPaw.11G048500 Carya illinoinensis HOM05D007878 ORTHO05D010022 7.3e-59 232.3 536 36.9
Phvul.003G187300 Phaseolus vulgaris HOM05D007878 ORTHO05D010022 1.3e-58 231.5 472 38.3
COL.COLO4_38427 Corchorus olitorius HOM05D007878 ORTHO05D010022 1.4e-57 228.0 524 35.1
Glyma.17G103300 Glycine max HOM05D007878 ORTHO05D010022 9.0e-57 225.3 460 45.7
FvH4_5g14430 Fragaria vesca HOM05D007878 ORTHO05D010022 5.8e-56 222.6 556 34.9
Actinidia09234 Actinidia chinensis HOM05D007878 ORTHO05D010022 9.3e-54 215.3 517 35.0
QL10p018347 Quercus lobata HOM05D007878 ORTHO05D010022 2.1e-53 214.2 462 36.4
GSVIVG01007952001 Vitis vinifera HOM05D007878 ORTHO05D010022 1.7e-52 211.1 447 37.6
Ca_21797_v3 Cicer arietinum L. HOM05D007878 ORTHO05D010022 1.1e-51 208.4 450 36.0
CANSAT80G1712 Cannabis sativa HOM05D007878 ORTHO05D010022 5.6e-51 206.1 470 35.3
Nn4g23313 Nelumbo nucifera HOM05D007878 ORTHO05D010022 5.6e-51 206.1 545 31.6
Medtr4g109150 Medicago truncatula HOM05D007878 ORTHO05D010022 7.3e-51 205.7 450 39.1
ClCG06G015920 Citrullus lanatus HOM05D007878 ORTHO05D010022 9.0e-49 198.7 452 34.5
Nitab4.5_0001211g0090 Nicotiana tabacum HOM05D007878 ORTHO05D010022 2.6e-48 197.2 524 31.5
Cpa.g.sc13.307 Carica papaya HOM05D007878 ORTHO05D010022 4.5e-48 196.4 504 36.5
TPR.G1999 Trifolium pratense HOM05D007878 ORTHO05D010022 1.9e-46 191.0 448 42.6
Aqoxy3G03537 Aquilegia oxysepala HOM05D007878 ORTHO05D010022 9.3e-46 188.7 552 29.9
Nitab4.5_0002756g0040 Nicotiana tabacum HOM05D007878 ORTHO05D010022 1.2e-45 188.3 528 35.4
Oeu031812.2 Olea europaea HOM05D007878 ORTHO05D010022 4.6e-45 186.4 512 32.0
MELO3C017199.2 Cucumis melo HOM05D007878 ORTHO05D010022 7.9e-45 185.7 446 35.7
MBI16_g14990_MAGBIO Magnolia biondii HOM05D007878 ORTHO05D010022 1.8e-44 184.5 499 33.5
CsaV3_1G002630 Cucumis sativus L. HOM05D007878 ORTHO05D010022 6.7e-44 182.6 443 35.0
Oeu052465.1 Olea europaea HOM05D007878 ORTHO05D010022 3.7e-42 176.8 495 36.2
Oeu052466.1 Olea europaea HOM05D007878 ORTHO05D010022 3.7e-42 176.8 495 36.2
Oeu046990.1 Olea europaea HOM05D007878 ORTHO05D010022 4.8e-42 176.4 476 38.9
arahy.Tifrunner.gnm1.ann1.3W98EY Arachis hypogaea HOM05D007878 ORTHO05D010022 6.9e-41 172.6 447 33.8
CSS0029238 Camellia sinensis var. sinensis HOM05D000957 ORTHO05D000754 5.8e-40 169.5 421 36.6
PGSC0003DMG400024662 Solanum tuberosum HOM05D007878 ORTHO05D010022 2.2e-39 167.5 493 36.9
Sopen03g034610 Solanum pennellii HOM05D007878 ORTHO05D010022 1.4e-38 164.9 487 34.7
DCAR_016585 Daucus carota HOM05D007878 ORTHO05D010022 1.2e-37 161.8 493 30.8
Solyc03g115620.2 Solanum lycopersicum HOM05D007878 ORTHO05D010022 1.3e-36 158.3 482 35.7
Nn3g17364 Nelumbo nucifera HOM05D007878 ORTHO05D010022 1.8e-36 157.9 240 42.9
Oeu047269.3 Olea europaea HOM05D007878 ORTHO05D010022 5.1e-36 156.4 481 37.6
CAN.G479.49 Capsicum annuum HOM05D007878 ORTHO05D010022 1.5e-35 154.8 501 31.5
Sed0013205 Sechium edule HOM05D007878 ORTHO05D010022 2.5e-35 154.1 508 34.1
arahy.Tifrunner.gnm1.ann1.QT4JJ4 Arachis hypogaea HOM05D007878 ORTHO05D010022 2.1e-34 151.0 433 32.3
Peaxi162Scf00274g00029 Petunia axillaris HOM05D007878 ORTHO05D010022 4.8e-34 149.8 523 33.7
ECA246G4297 Erigeron canadensis HOM05D007878 ORTHO05D010022 4.1e-33 146.7 425 32.5
MD06G1198500 Malus domestica HOM05D007878 ORTHO05D010022 6.9e-33 146.0 526 32.3
ATR0730G174 Amborella trichopoda HOM05D007878 ORTHO05D010022 3.8e-31 140.2 558 27.6
Psat4g049000 Pisum sativum HOM05D007878 ORTHO05D010022 2.1e-29 134.4 423 30.5
Eucgr.B00555 Eucalyptus grandis HOM05D007878 ORTHO05D010022 3.0e-28 130.6 454 28.2
PSO063G3897 Papaver somniferum HOM05D007878 ORTHO05D010022 1.1e-27 128.6 515 29.5
HanXRQChr05g0157141 Helianthus annuus HOM05D007878 ORTHO05D010022 7.4e-27 125.9 412 30.1
MSTRG.22991 Avicennia marina HOM05D007878 ORTHO05D010022 1.4e-22 111.7 137 51.8
DCAR_026030 Daucus carota HOM05D000094 ORTHO05D003883 1.4e-22 111.7 226 35.8
Migut.I00229 Erythranthe guttata HOM05D007878 ORTHO05D010022 5.5e-22 109.8 471 28.0
arahy.Tifrunner.gnm1.ann1.0CJ0KN Arachis hypogaea HOM05D007878 ORTHO05D010022 1.2e-16 92.0 141 41.8
arahy.Tifrunner.gnm1.ann1.H3BYSM Arachis hypogaea HOM05D007878 ORTHO05D010022 3.4e-16 90.5 141 41.1
Atru.chr9.308 Acer truncatum HOM05D007878 ORTHO05D010022 2.2e-15 87.8 166 38.0
Lsat_1_v5_gn_5_21161 Lactuca sativa HOM05D007878 ORTHO05D010022 1.8e-12 78.2 72 52.8
DCAR_021514 Daucus carota HOM05D007878 ORTHO05D010022 3.3e-11 73.9 142 37.3
Sabra15G0086500 Salix brachista HOM05D007878 ORTHO05D010022 6.5e-07 59.7 72 50.0
Sabra15G0086400 Salix brachista HOM05D007878 ORTHO05D010022 5.5e-06 56.6 58 55.2


User provided reference genes

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