Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07652 Corylus avellana HOM05D008369 ORTHO05D005932 8.6e-143 510.4 271 100.0
Cfa019277 Carpinus fangiana HOM05D008369 ORTHO05D005932 5.2e-79 298.5 198 81.8
QL10p017723 Quercus lobata HOM05D008369 ORTHO05D005932 4.6e-27 125.9 204 49.0
MD14G1205100 Malus domestica HOM05D008369 ORTHO05D005932 1.1e-23 114.8 186 46.2
MD06G1197700 Malus domestica HOM05D008369 ORTHO05D005932 2.6e-22 110.2 189 43.9
Ciclev10022335m.g Citrus clementina HOM05D008369 ORTHO05D005932 1.3e-21 107.8 198 39.9
CSS0001536 Camellia sinensis var. sinensis HOM05D008369 ORTHO05D005932 2.1e-19 100.5 187 37.4
Duzib084G1416 Durio zibethinus HOM05D008369 ORTHO05D005932 2.7e-19 100.1 185 38.9
Gohir.A11G032000 Gossypium hirsutum HOM05D008369 ORTHO05D005932 2.7e-19 100.1 189 39.2
Sed0006867 Sechium edule HOM05D008369 ORTHO05D005932 2.7e-19 100.1 181 44.2
COL.COLO4_36949 Corchorus olitorius HOM05D008369 ORTHO05D005932 3.0e-18 96.7 222 38.3
Thecc.03G094300 Theobroma cacao HOM05D008369 ORTHO05D005932 1.5e-17 94.4 218 36.2
Prupe.5G198500 Prunus persica HOM05D008369 ORTHO05D005932 7.3e-17 92.0 214 39.3
CSS0024821 Camellia sinensis var. sinensis HOM05D008369 ORTHO05D005932 3.6e-16 89.7 187 35.3
arahy.Tifrunner.gnm1.ann1.7B8RN4 Arachis hypogaea HOM05D008369 ORTHO05D005932 1.4e-15 87.8 185 44.3
Manes.06G089401 Manihot esculenta HOM05D000041 ORTHO05D006140 1.4e-15 87.8 199 34.7
RcHm_v2.0_Chr7g0182121 Rosa chinensis HOM05D008369 ORTHO05D005932 2.4e-15 87.0 219 32.4
Gohir.D11G035400 Gossypium hirsutum HOM05D008369 ORTHO05D005932 4.0e-15 86.3 187 38.0
Dinv38746 Davidia involucrata HOM05D008369 ORTHO05D005932 6.9e-15 85.5 180 40.6
arahy.Tifrunner.gnm1.ann1.G0M71R Arachis hypogaea HOM05D008369 ORTHO05D005932 1.2e-14 84.7 185 40.5
Gorai.007G038200 Gossypium raimondii HOM05D008369 ORTHO05D005932 3.4e-14 83.2 188 35.1
FAN18G3211 Fragaria x ananassa HOM05D008369 ORTHO05D005932 7.6e-14 82.0 188 32.4
Lalb_Chr12g0196981 Lupinus albus HOM05D008369 ORTHO05D005932 9.9e-14 81.6 207 37.7
Gorai.008G194900 Gossypium raimondii HOM05D008369 ORTHO05D005932 1.3e-13 81.3 189 33.9
TAR622G0621 Trochodendron aralioides HOM05D034691 ORTHO05D005932 1.7e-13 80.9 199 33.7
TAR006G0004 Trochodendron aralioides HOM05D009095 ORTHO05D005932 6.4e-13 79.0 194 38.1
Gohir.D12G181600 Gossypium hirsutum HOM05D008369 ORTHO05D005932 8.4e-13 78.6 173 34.7
Cc00_g25850 Coffea canephora HOM05D012087 ORTHO05D005932 1.4e-12 77.8 227 35.2
FAN08G2699 Fragaria x ananassa HOM05D008369 ORTHO05D005932 1.4e-12 77.8 205 31.2
FAN13G2099 Fragaria x ananassa HOM05D008369 ORTHO05D005932 1.4e-12 77.8 205 31.2
ClCG04G012080 Citrullus lanatus HOM05D008369 ORTHO05D005932 1.9e-12 77.4 177 33.9
Medtr4g108990 Medicago truncatula HOM05D008369 ORTHO05D005932 1.9e-12 77.4 194 33.0
Gohir.A12G179000 Gossypium hirsutum HOM05D008369 ORTHO05D005932 5.4e-12 75.9 170 34.1
FvH4_5g14530 Fragaria vesca HOM05D008369 ORTHO05D005932 7.1e-12 75.5 205 29.8
Psat4g049480 Pisum sativum HOM05D008369 ORTHO05D005932 9.3e-12 75.1 168 43.5
SalBow5G3698 Salvia bowleyana HOM05D012087 ORTHO05D005932 1.3e-10 71.2 171 35.1
TAR622G1347 Trochodendron aralioides HOM05D034691 ORTHO05D005932 3.9e-10 69.7 200 31.0
GSVIVG01007962001 Vitis vinifera HOM05D008369 ORTHO05D005932 6.6e-10 68.9 160 35.6
Rhsim08G0152100 Rhododendron simsii HOM05D008369 ORTHO05D005932 4.3e-09 66.2 175 32.6
Cpa.g.sc13.297 Carica papaya HOM05D008369 ORTHO05D005932 2.8e-08 63.5 198 32.3
TPR.G2001 Trifolium pratense HOM05D008369 ORTHO05D005932 2.8e-08 63.5 173 31.2
PGR044G0243 Punica granatum HOM05D008369 ORTHO05D005932 4.8e-08 62.8 199 38.2
vmacro17570 Vaccinium macrocarpon HOM05D008369 ORTHO05D005932 1.1e-07 61.6 166 31.3
CANSAT80G1936 Cannabis sativa HOM05D008369 ORTHO05D005932 1.4e-07 61.2 147 33.3
CsaV3_1G005690 Cucumis sativus L. HOM05D008369 ORTHO05D005932 1.8e-07 60.8 199 36.7
Sopen03g034710 Solanum pennellii HOM05D012087 ORTHO05D005932 4.0e-07 59.7 179 35.8
MELO3C002000.2 Cucumis melo HOM05D008369 ORTHO05D005932 5.3e-07 59.3 182 36.8
Nn4g23279 Nelumbo nucifera HOM05D034691 ORTHO05D005932 5.3e-07 59.3 149 28.9
Nn3g17332 Nelumbo nucifera HOM05D009095 ORTHO05D005932 6.9e-07 58.9 207 25.1
PGSC0003DMG400024562 Solanum tuberosum HOM05D012087 ORTHO05D005932 9.0e-07 58.5 179 33.5
THA.LOC104818323 Tarenaya hassleriana HOM05D010063 ORTHO05D011941 1.2e-06 58.2 211 29.4
Dinv10658 Davidia involucrata HOM05D008369 ORTHO05D005932 1.5e-06 57.8 111 40.5
Actinidia04866 Actinidia chinensis HOM05D008369 ORTHO05D005932 2.6e-06 57.0 177 30.5


User provided reference genes

Program Settings