Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07407 Corylus avellana HOM05D009197 ORTHO05D010857 4.0e-134 481.5 253 100.0
Haze_07415 Corylus avellana HOM05D000207 ORTHO05D002370 1.1e-70 270.8 141 100.0
Cfa019040 Carpinus fangiana HOM05D009197 ORTHO05D010857 3.8e-52 209.1 123 90.2
Peaxi162Scf00689g00559 Petunia axillaris HOM05D000207 ORTHO05D002370 1.9e-30 137.1 278 37.4
Thecc.03G071400 Theobroma cacao HOM05D009197 ORTHO05D010857 2.1e-26 123.6 133 51.9
Potri.015G068800 Populus trichocarpa HOM05D009197 ORTHO05D010857 4.0e-25 119.4 137 54.7
Potri.012G073800 Populus trichocarpa HOM05D009197 ORTHO05D010857 5.2e-25 119.0 139 54.0
CSS0015959 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 2.2e-23 113.6 137 49.6
Actinidia04946 Actinidia chinensis HOM05D004313 ORTHO05D005036 2.4e-22 110.2 178 42.7
QL10p013987 Quercus lobata HOM05D009197 ORTHO05D010857 5.4e-22 109.0 113 55.8
Sabra15G0093200 Salix brachista HOM05D009197 ORTHO05D010857 6.0e-21 105.5 139 47.5
Manes.14G072000 Manihot esculenta HOM05D009197 ORTHO05D010857 1.3e-20 104.4 125 54.4
Dinv07989 Davidia involucrata HOM05D009197 ORTHO05D010857 5.1e-20 102.4 119 55.5
Gohir.A11G028000 Gossypium hirsutum HOM05D009197 ORTHO05D010857 3.3e-19 99.8 136 50.7
Atru.chr9.2375 Acer truncatum HOM05D009197 ORTHO05D010857 9.5e-19 98.2 140 48.6
Gohir.D11G031200 Gossypium hirsutum HOM05D009197 ORTHO05D010857 6.2e-18 95.5 136 49.3
Gorai.007G034100 Gossypium raimondii HOM05D009197 ORTHO05D010857 6.2e-18 95.5 136 49.3
Nitab4.5_0000003g0200 Nicotiana tabacum HOM05D009197 ORTHO05D010857 4.0e-17 92.8 137 45.3
COL.COLO4_07631 Corchorus olitorius HOM05D009197 ORTHO05D010857 8.9e-17 91.7 138 48.6
Ciclev10022789m.g Citrus clementina HOM05D009197 ORTHO05D010857 2.6e-16 90.1 140 48.6
Nitab4.5_0000758g0060 Nicotiana tabacum HOM05D009197 ORTHO05D010857 9.9e-16 88.2 139 44.6
Solyc06g071220.1 Solanum lycopersicum HOM05D009197 ORTHO05D010857 1.9e-14 84.0 137 41.6
Sopen06g027530 Solanum pennellii HOM05D009197 ORTHO05D010857 1.9e-14 84.0 137 41.6
CSS0023152 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 4.1e-14 82.8 133 44.4
CAN.G628.60 Capsicum annuum HOM05D009197 ORTHO05D010857 4.1e-14 82.8 132 42.4
Rhsim08G0163700 Rhododendron simsii HOM05D009197 ORTHO05D010857 7.1e-14 82.0 129 45.0
Aqoxy3G03174 Aquilegia oxysepala HOM05D009197 ORTHO05D010857 7.8e-13 78.6 132 39.4
PGSC0003DMG400033096 Solanum tuberosum HOM05D009197 ORTHO05D010857 3.9e-12 76.3 120 41.7
Lj4g0014795 Lotus japonicus HOM05D013104 ORTHO05D010857 9.6e-11 71.6 121 41.3
Phvul.003G195600 Phaseolus vulgaris HOM05D013104 ORTHO05D010857 9.6e-11 71.6 117 41.9
Gohir.D03G089850 Gossypium hirsutum HOM05D009197 ORTHO05D010857 2.8e-10 70.1 129 39.5
Medtr4g107270 Medicago truncatula HOM05D013104 ORTHO05D010857 3.6e-10 69.7 124 40.3
Duzib205G1360 Durio zibethinus HOM05D009197 ORTHO05D010857 1.8e-09 67.4 102 42.2
TPR.G38456 Trifolium pratense HOM05D013104 ORTHO05D010857 6.9e-09 65.5 130 37.7
QL03p067559 Quercus lobata HOM05D009197 ORTHO05D010857 2.0e-08 63.9 122 37.7
Glyma.05G032100 Glycine max HOM05D013104 ORTHO05D010857 4.4e-08 62.8 120 37.5
Psat4g054920 Pisum sativum HOM05D013104 ORTHO05D010857 1.3e-07 61.2 128 37.5
Sed0012922 Sechium edule HOM05D022550 ORTHO05D025091 1.3e-07 61.2 138 38.4
Nn4g22968 Nelumbo nucifera HOM05D009197 ORTHO05D010857 2.9e-07 60.1 138 34.8
VMungo1215G2054 Vigna mungo HOM05D013104 ORTHO05D010857 4.9e-07 59.3 109 40.4
ClCG01G014220 Citrullus lanatus HOM05D022550 ORTHO05D025091 1.1e-06 58.2 148 35.8
MELO3C002227.2 Cucumis melo HOM05D022550 ORTHO05D025091 3.2e-06 56.6 141 36.2
Glyma.17G094600 Glycine max HOM05D013104 ORTHO05D010857 7.1e-06 55.5 120 35.8
QL03p067585 Quercus lobata HOM05D009197 ORTHO05D010857 7.1e-06 55.5 122 36.1
TAR371G0864 Trochodendron aralioides HOM05D009197 ORTHO05D010857 7.1e-06 55.5 145 33.8


User provided reference genes

Program Settings