Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 1.6e-69 266.5 196 100.0
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 7.8e-69 264.2 196 84.7
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 5.3e-49 198.4 196 66.8
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 1.2e-48 197.2 197 66.5
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 6.0e-45 184.9 196 64.8
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 6.0e-45 184.9 196 64.8
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 6.0e-45 184.9 203 69.5
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 1.0e-44 184.1 196 64.8
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 1.7e-44 183.3 203 63.1
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 2.3e-44 183.0 202 63.4
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 1.9e-43 179.9 197 64.0
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 1.9e-43 179.9 196 61.7
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 2.5e-43 179.5 189 62.4
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 5.6e-43 178.3 198 62.1
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 7.3e-43 177.9 196 64.3
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 1.3e-42 177.2 203 62.6
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 2.1e-42 176.4 201 60.2
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 3.6e-42 175.6 203 61.6
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 3.6e-42 175.6 202 61.9
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 4.8e-42 175.3 177 64.4
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 6.2e-42 174.9 198 64.1
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 6.2e-42 174.9 198 62.1
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 8.1e-42 174.5 198 62.6
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 8.1e-42 174.5 189 61.9
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.1e-41 174.1 203 61.1
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 1.4e-41 173.7 201 61.7
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 1.8e-41 173.3 174 65.5
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 2.4e-41 172.9 196 62.8
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 4.0e-41 172.2 199 63.3
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 5.3e-41 171.8 203 60.6
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.2e-40 170.6 196 60.7
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 1.5e-40 170.2 178 63.5
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 1.5e-40 170.2 196 60.7
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 3.4e-40 169.1 178 63.5
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 3.4e-40 169.1 178 63.5
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 4.5e-40 168.7 176 64.8
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 5.8e-40 168.3 174 63.8
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 5.8e-40 168.3 190 60.5
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 9.9e-40 167.5 196 59.7
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 2.2e-39 166.4 193 60.6
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 2.2e-39 166.4 178 63.5
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 3.8e-39 165.6 198 61.1
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 4.9e-39 165.2 196 57.7
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 8.4e-39 164.5 196 58.2
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 3.2e-38 162.5 202 59.4
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 4.2e-38 162.2 179 63.1
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 5.4e-38 161.8 176 60.8
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 7.1e-38 161.4 196 66.8
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 7.1e-38 161.4 163 66.3
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 2.7e-37 159.5 119 83.2
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 3.5e-37 159.1 178 62.9
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 6.0e-37 158.3 167 65.3
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 7.9e-37 157.9 154 70.1
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 7.9e-37 157.9 173 63.0
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 1.0e-36 157.5 178 61.8
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 1.0e-36 157.5 193 58.5
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 3.0e-36 156.0 199 57.8
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 3.9e-36 155.6 154 69.5
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 6.7e-36 154.8 170 67.1
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 8.7e-36 154.5 193 56.5
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 1.1e-35 154.1 165 62.4
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 1.9e-35 153.3 173 60.1
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 2.5e-35 152.9 201 58.7
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 5.6e-35 151.8 149 68.5
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 5.6e-35 151.8 153 68.6
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 7.4e-35 151.4 107 90.7
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 9.6e-35 151.0 173 60.7
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 9.6e-35 151.0 181 60.2
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 9.6e-35 151.0 181 58.6
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 9.6e-35 151.0 181 58.6
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 1.3e-34 150.6 162 61.7
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 1.3e-34 150.6 166 61.4
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 1.3e-34 150.6 181 59.1
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 1.3e-34 150.6 159 65.4
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 1.6e-34 150.2 201 57.7
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 1.6e-34 150.2 201 57.7
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 1.6e-34 150.2 158 65.8
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 2.1e-34 149.8 201 57.2
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 2.8e-34 149.4 151 68.2
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 2.8e-34 149.4 173 64.7
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 3.7e-34 149.1 159 64.2
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 4.8e-34 148.7 197 57.4
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 6.2e-34 148.3 201 57.7
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 8.1e-34 147.9 174 59.2
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 1.1e-33 147.5 174 64.4
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 2.4e-33 146.4 181 58.6
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 2.4e-33 146.4 206 53.9
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 4.0e-33 145.6 196 54.6
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 4.0e-33 145.6 196 54.6
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 4.0e-33 145.6 196 54.6
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 5.3e-33 145.2 196 57.7
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 6.9e-33 144.8 196 54.6
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 6.9e-33 144.8 196 54.6
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 6.9e-33 144.8 196 56.6
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 2.0e-32 143.3 163 62.0
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 5.8e-32 141.7 149 65.8
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 2.2e-31 139.8 157 66.9
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 2.9e-31 139.4 197 53.3
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 3.8e-31 139.0 172 57.0
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 4.9e-31 138.7 201 54.7
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 8.4e-31 137.9 150 64.0
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 1.8e-28 130.2 107 80.4
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.8e-28 130.2 202 55.0
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 3.9e-28 129.0 174 54.0
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 1.5e-27 127.1 201 52.2
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 9.6e-27 124.4 106 60.4
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 2.4e-25 119.8 180 51.1
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 8.4e-23 111.3 174 50.6
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 1.2e-21 107.5 70 71.4
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 2.1e-21 106.7 161 50.3
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 3.9e-20 102.4 112 66.1
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 3.7e-18 95.9 98 57.1
SGA_v2.0_scaffold294G47475 Striga asiatica HOM05D006349 ORTHO05D008205 7.7e-16 88.2 100 56.0
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 7.2e-14 81.6 187 41.2
Nn8g40820 Nelumbo nucifera HOM05D006349 ORTHO05D008205 2.7e-13 79.7 115 51.3
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 7.9e-13 78.2 160 43.8
Pp3c24_420 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.8e-12 77.0 74 51.4
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 2.0e-11 73.6 150 44.0
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 4.8e-10 68.9 65 53.8
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 3.4e-08 62.8 140 44.3
BcaC03g15526 Brassica carinata HOM05D006349 ORTHO05D008205 3.2e-06 56.2 110 40.9


User provided reference genes

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