Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07335 Corylus avellana HOM05D006541 ORTHO05D008471 1.5e-228 795.8 406 100.0
Cfa018953 Carpinus fangiana HOM05D006541 ORTHO05D008471 3.5e-196 688.3 369 95.7
QL10p016702 Quercus lobata HOM05D006541 ORTHO05D008471 6.8e-184 647.5 382 85.6
GSVIVG01008019001 Vitis vinifera HOM05D006541 ORTHO05D008471 7.1e-157 557.8 381 75.1
CiPaw.11G043400 Carya illinoinensis HOM05D006541 ORTHO05D008471 4.3e-154 548.5 353 80.7
Dinv38701 Davidia involucrata HOM05D006541 ORTHO05D008471 6.8e-152 541.2 383 73.6
TAR629G1448 Trochodendron aralioides HOM05D006541 ORTHO05D008471 1.6e-148 530.0 383 71.8
MD14G1199100 Malus domestica HOM05D006541 ORTHO05D008471 1.7e-147 526.6 383 72.8
Phvul.003G190700 Phaseolus vulgaris HOM05D006541 ORTHO05D008471 5.1e-147 525.0 381 73.8
Prupe.5G192200 Prunus persica HOM05D006541 ORTHO05D008471 8.7e-147 524.2 383 73.9
Duzib205G0457 Durio zibethinus HOM05D006541 ORTHO05D008471 4.3e-146 521.9 353 75.6
Gohir.A03G066400 Gossypium hirsutum HOM05D006541 ORTHO05D008471 9.6e-146 520.8 355 76.1
VMungo1215G1397 Vigna mungo HOM05D006541 ORTHO05D008471 1.6e-145 520.0 381 73.2
Psat4g051480 Pisum sativum HOM05D006541 ORTHO05D008471 2.8e-145 519.2 386 70.5
RcHm_v2.0_Chr7g0181151 Rosa chinensis HOM05D006541 ORTHO05D008471 1.1e-144 517.3 382 73.3
Glyma.17G099300 Glycine max HOM05D006541 ORTHO05D008471 2.4e-144 516.2 381 71.7
Atru.chr9.2260 Acer truncatum HOM05D006541 ORTHO05D008471 2.0e-143 513.1 358 75.1
ClCG04G012330 Citrullus lanatus HOM05D006541 ORTHO05D008471 3.8e-142 508.8 369 73.2
Ca_21826_v3 Cicer arietinum L. HOM05D006541 ORTHO05D008471 8.4e-142 507.7 383 71.0
Thecc.03G085100 Theobroma cacao HOM05D006541 ORTHO05D008471 2.4e-141 506.1 353 75.6
Cpa.g.c35819 Carica papaya HOM05D006541 ORTHO05D008471 5.4e-141 505.0 371 73.0
Ciclev10020397m.g Citrus clementina HOM05D006541 ORTHO05D008471 1.3e-139 500.4 363 72.7
MD06G1192400 Malus domestica HOM05D006541 ORTHO05D008471 1.3e-139 500.4 416 67.1
FAN04G2599 Fragaria x ananassa HOM05D006541 ORTHO05D008471 1.7e-139 500.0 384 70.8
Medtr4g108590 Medicago truncatula HOM05D006541 ORTHO05D008471 1.7e-139 500.0 386 69.2
TAR371G1054 Trochodendron aralioides HOM05D006541 ORTHO05D008471 2.3e-139 499.6 352 73.6
FAN18G0374 Fragaria x ananassa HOM05D006541 ORTHO05D008471 3.0e-139 499.2 384 70.6
arahy.Tifrunner.gnm1.ann1.84ES4F Arachis hypogaea HOM05D006541 ORTHO05D008471 3.9e-139 498.8 378 69.8
Gorai.003G096900 Gossypium raimondii HOM05D006541 ORTHO05D008471 8.7e-139 497.7 386 69.4
Lj4g0004556 Lotus japonicus HOM05D006541 ORTHO05D008471 8.7e-139 497.7 356 73.0
arahy.Tifrunner.gnm1.ann1.ZY6HCY Arachis hypogaea HOM05D006541 ORTHO05D008471 1.1e-138 497.3 378 69.6
Eucgr.B00491 Eucalyptus grandis HOM05D006541 ORTHO05D008471 1.5e-138 496.9 386 67.6
Manes.06G093400 Manihot esculenta HOM05D006541 ORTHO05D008471 5.6e-138 495.0 360 73.6
Nn4g23149 Nelumbo nucifera HOM05D006541 ORTHO05D008471 1.3e-137 493.8 394 66.0
FAN08G2919 Fragaria x ananassa HOM05D006541 ORTHO05D008471 1.4e-136 490.3 384 70.3
Gohir.D03G093000 Gossypium hirsutum HOM05D006541 ORTHO05D008471 4.0e-136 488.8 353 73.1
TPR.G34732 Trifolium pratense HOM05D006541 ORTHO05D008471 9.9e-135 484.2 390 67.2
FvH4_5g15050 Fragaria vesca HOM05D006541 ORTHO05D008471 1.7e-134 483.4 384 68.8
MELO3C001974.2 Cucumis melo HOM05D006541 ORTHO05D008471 2.2e-134 483.0 352 72.4
TWI60G0844 Tripterygium wilfordii HOM05D006541 ORTHO05D008471 2.9e-134 482.6 356 71.9
PSO063G0566 Papaver somniferum HOM05D006541 ORTHO05D008471 4.9e-134 481.9 392 65.6
MBI05_g08285_MAGBIO Magnolia biondii HOM05D006541 ORTHO05D008471 8.4e-134 481.1 382 66.0
CsaV3_1G005390 Cucumis sativus L. HOM05D006541 ORTHO05D008471 1.1e-133 480.7 347 73.2
Lalb_Chr07g0178001 Lupinus albus HOM05D006541 ORTHO05D008471 2.1e-132 476.5 339 72.6
Lj5A111T86 Lonicera japonica HOM05D006541 ORTHO05D008471 7.9e-132 474.6 346 72.8
Hma1.2p1_0104F.1_g049970 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 3.0e-131 472.6 340 73.2
PGR083G1696 Punica granatum HOM05D006541 ORTHO05D008471 1.5e-130 470.3 384 67.2
Aqoxy3G03367 Aquilegia oxysepala HOM05D006541 ORTHO05D008471 2.5e-130 469.5 381 65.6
Nitab4.5_0000842g0050 Nicotiana tabacum HOM05D006541 ORTHO05D008471 8.1e-129 464.5 400 63.0
CANSAT25G3319 Cannabis sativa HOM05D006541 ORTHO05D008471 1.1e-128 464.2 384 64.6
Nitab4.5_0012137g0020 Nicotiana tabacum HOM05D006541 ORTHO05D008471 2.4e-128 463.0 400 63.0
Hma1.2p1_0104F.1_g049980 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 6.4e-126 454.9 342 70.2
THA.LOC104821445 Tarenaya hassleriana HOM05D006541 ORTHO05D008471 1.1e-125 454.1 396 63.6
Peaxi162Scf00274g00732 Petunia axillaris HOM05D006541 ORTHO05D008471 1.4e-125 453.8 400 62.2
CAN.G837.10 Capsicum annuum HOM05D006541 ORTHO05D008471 4.2e-125 452.2 398 62.3
Sabra12G0049100 Salix brachista HOM05D006541 ORTHO05D008471 4.2e-125 452.2 427 61.6
Sed0004898 Sechium edule HOM05D006541 ORTHO05D008471 9.3e-125 451.1 347 69.2
COL.COLO4_24520 Corchorus olitorius HOM05D000087 ORTHO05D008471 2.7e-124 449.5 340 72.1
Rhsim08G0155500 Rhododendron simsii HOM05D006541 ORTHO05D008471 4.6e-124 448.7 322 72.0
AL5G26900 Arabidopsis lyrata HOM05D006541 ORTHO05D008471 7.9e-124 448.0 384 63.8
Hund02657 Selenicereus undatus HOM05D006541 ORTHO05D008471 3.9e-123 445.7 379 64.4
Oeu006508.1 Olea europaea HOM05D006541 ORTHO05D008471 1.5e-122 443.7 343 67.6
AT3G47610 Arabidopsis thaliana HOM05D006541 ORTHO05D008471 2.1e-121 439.9 384 62.5
AUR62021701 Chenopodium quinoa HOM05D006541 ORTHO05D008471 1.1e-120 437.6 378 62.4
Carub.0005s1374 Capsella rubella HOM05D006541 ORTHO05D008471 2.4e-120 436.4 384 61.7
AUR62008395 Chenopodium quinoa HOM05D006541 ORTHO05D008471 2.0e-119 433.3 378 61.6
MSTRG.11386 Avicennia marina HOM05D006541 ORTHO05D008471 5.8e-119 431.8 343 68.2
Cc04_g16740 Coffea canephora HOM05D006541 ORTHO05D008471 1.0e-118 431.0 362 65.2
BolC3t19470H Brassica oleracea HOM05D006541 ORTHO05D008471 6.5e-118 428.3 385 61.6
CSS0004518 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 3.2e-117 426.0 382 61.5
Thhalv10010423m.g Eutrema salsugineum HOM05D006541 ORTHO05D008471 3.2e-117 426.0 387 61.0
CSS0042048 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 1.2e-116 424.1 360 65.6
BcaC01g01798 Brassica carinata HOM05D006541 ORTHO05D008471 2.7e-116 422.9 385 61.6
C03p71820 Brassica napus HOM05D006541 ORTHO05D008471 2.7e-116 422.9 385 61.6
Solyc03g116140.3 Solanum lycopersicum HOM05D006541 ORTHO05D008471 2.7e-116 422.9 374 62.6
Sp5g14300 Schrenkiella parvula HOM05D006541 ORTHO05D008471 3.5e-116 422.5 385 61.3
Sc12g0006320 Simmondsia chinensis HOM05D006541 ORTHO05D008471 7.9e-116 421.4 378 61.4
BcaB01g00902 Brassica carinata HOM05D006541 ORTHO05D008471 1.0e-115 421.0 353 64.0
A06p20010 Brassica napus HOM05D006541 ORTHO05D008471 1.0e-115 421.0 385 61.6
BraA06t25087Z Brassica rapa HOM05D006541 ORTHO05D008471 1.0e-115 421.0 385 61.6
Actinidia37633 Actinidia chinensis HOM05D006541 ORTHO05D008471 1.3e-115 420.6 346 65.6
Potri.012G068900 Populus trichocarpa HOM05D006541 ORTHO05D008471 1.8e-115 420.2 339 68.4
Sopen03g035110 Solanum pennellii HOM05D006541 ORTHO05D008471 1.8e-115 420.2 374 62.3
DCAR_016545 Daucus carota HOM05D006541 ORTHO05D008471 3.9e-115 419.1 343 66.5
CARHR156290 Cardamine hirsuta HOM05D006541 ORTHO05D008471 1.5e-114 417.2 386 60.9
Lsat_1_v5_gn_1_13281 Lactuca sativa HOM05D006541 ORTHO05D008471 6.3e-113 411.8 345 64.3
Ah.11g048540 Amaranthus hybridus HOM05D006541 ORTHO05D008471 8.2e-113 411.4 378 60.1
CDE06G2127 Ceratophyllum demersum HOM05D006541 ORTHO05D008471 3.1e-112 409.5 391 59.1
BcaB05g23063 Brassica carinata HOM05D006541 ORTHO05D008471 4.1e-112 409.1 381 59.1
HanXRQChr02g0041061 Helianthus annuus HOM05D006541 ORTHO05D008471 3.4e-111 406.0 346 63.0
PGSC0003DMG400019513 Solanum tuberosum HOM05D006541 ORTHO05D008471 1.3e-110 404.1 362 61.9
SGA_v2.0_scaffold25G10913 Striga asiatica HOM05D006541 ORTHO05D008471 1.1e-109 401.0 350 64.3
EL10Ac5g10987 Beta vulgaris HOM05D006541 ORTHO05D008471 1.9e-109 400.2 354 61.9
ECA247G0129 Erigeron canadensis HOM05D006541 ORTHO05D008471 1.2e-108 397.5 346 61.3
HPP92_016797 Vanilla planifolia HOM05D006541 ORTHO05D008471 7.9e-108 394.8 381 58.0
HPP92_016827 Vanilla planifolia HOM05D006541 ORTHO05D008471 6.7e-107 391.7 381 57.7
ATR0598G034 Amborella trichopoda HOM05D006541 ORTHO05D008471 2.5e-106 389.8 341 61.6
unitig_0.g2528 Utricularia gibba HOM05D006541 ORTHO05D008471 1.5e-103 380.6 341 61.9
Migut.I00173 Erythranthe guttata HOM05D006541 ORTHO05D008471 3.4e-103 379.4 344 61.3
Aa31LG4G16360 Aethionema arabicum HOM05D006541 ORTHO05D008471 2.9e-102 376.3 388 55.9
vmacro17549 Vaccinium macrocarpon HOM05D006541 ORTHO05D008471 8.0e-92 341.7 355 54.1
SEGI_30902 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 1.2e-87 327.8 391 50.6
Actinidia04898 Actinidia chinensis HOM05D006541 ORTHO05D008471 5.4e-72 275.8 212 71.7
Zm00001eb312480 Zea mays HOM05D006541 ORTHO05D008471 1.7e-70 270.8 266 57.9
Mapoly0060s0059 Marchantia polymorpha HOM05D006541 ORTHO05D003603 2.1e-68 263.8 387 43.2
Potri.003G168100 Populus trichocarpa HOM05D006541 ORTHO05D008471 1.4e-67 261.2 157 85.4
Pp3c16_180 Physcomitrium patens HOM05D006541 ORTHO05D003603 8.9e-67 258.5 400 42.8
Pp3c16_188 Physcomitrium patens HOM05D006541 ORTHO05D003603 8.9e-67 258.5 400 42.8
AagrBONN_evm.TU.Sc2ySwM_228.4960 Anthoceros agrestis HOM05D006541 ORTHO05D008471 1.6e-63 247.7 392 44.4
Cpa.g.sc111.3 Carica papaya HOM05D006541 ORTHO05D008471 6.2e-44 182.6 129 72.9
Actinidia04899 Actinidia chinensis HOM05D006541 ORTHO05D008471 1.4e-40 171.4 126 68.3
Os09g0413100 Oryza sativa ssp. japonica HOM05D006541 ORTHO05D008471 1.1e-37 161.8 183 50.3
CBR_g8828 Chara braunii HOM05D003341 ORTHO05D003603 2.6e-34 150.6 369 33.6
SEGI_16548 Sequoiadendron giganteum HOM05D003341 ORTHO05D003603 4.0e-27 126.7 412 28.4
Sed0007979 Sechium edule HOM05D006541 ORTHO05D008471 1.5e-26 124.8 114 58.8
Cre09.g412350 Chlamydomonas reinhardtii HOM05D003341 ORTHO05D003603 3.8e-17 93.6 187 36.4
PRCOL_00002459 Prasinoderma coloniale HOM05D006541 ORTHO05D008471 4.2e-16 90.1 144 41.0
vmacro17551 Vaccinium macrocarpon HOM05D006541 ORTHO05D000277 1.6e-12 78.2 83 53.0
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 9.0e-11 72.4 166 41.6
FAN14G0637 Fragaria x ananassa HOM05D006541 ORTHO05D008471 3.2e-08 63.9 90 51.1
Cfa027053 Carpinus fangiana HOM05D006541 ORTHO05D124901 1.0e-06 58.9 235 24.3
MBI05_g08284_MAGBIO Magnolia biondii HOM05D006541 ORTHO05D008471 6.7e-06 56.2 78 37.2


User provided reference genes

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