Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07318 Corylus avellana HOM05D007106 ORTHO05D007770 5.0e-84 314.3 150 100.0
Cfa018934 Carpinus fangiana HOM05D007106 ORTHO05D007770 7.9e-21 104.4 58 81.0
QL10p017125 Quercus lobata HOM05D007106 ORTHO05D007770 6.7e-12 74.7 37 83.8
CiPaw.11G045300 Carya illinoinensis HOM05D007106 ORTHO05D007770 2.5e-11 72.8 57 59.6
CiPaw.12G013000 Carya illinoinensis HOM05D007106 ORTHO05D007770 6.3e-10 68.2 41 70.7
Nn3g17263 Nelumbo nucifera HOM05D007106 ORTHO05D007770 1.4e-09 67.0 46 63.0
MD14G1201500 Malus domestica HOM05D007106 ORTHO05D007770 9.1e-09 64.3 68 47.1
Dinv38719 Davidia involucrata HOM05D007106 ORTHO05D007770 1.2e-08 63.9 58 48.3
Prupe.5G194500 Prunus persica HOM05D007106 ORTHO05D007770 2.6e-08 62.8 46 69.6
GSVIVG01007993001 Vitis vinifera HOM05D007106 ORTHO05D007770 5.9e-08 61.6 66 51.5
COL.COLO4_08636 Corchorus olitorius HOM05D007106 ORTHO05D007770 7.7e-08 61.2 75 49.3
TAR374G1315 Trochodendron aralioides HOM05D007106 ORTHO05D007770 7.7e-08 61.2 43 67.4
Manes.06G091700 Manihot esculenta HOM05D007106 ORTHO05D007770 1.0e-07 60.8 51 60.8
Thecc.03G089800 Theobroma cacao HOM05D007106 ORTHO05D007770 1.3e-07 60.5 93 43.0
Atru.chr9.252 Acer truncatum HOM05D007106 ORTHO05D007770 1.7e-07 60.1 49 59.2
Phvul.009G186700 Phaseolus vulgaris HOM05D007106 ORTHO05D007770 5.0e-07 58.5 40 70.0
Duzib205G0867 Durio zibethinus HOM05D007106 ORTHO05D007770 6.5e-07 58.2 50 60.0
Glyma.06G194600 Glycine max HOM05D007106 ORTHO05D007770 6.5e-07 58.2 50 58.0
CSS0012235 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 8.5e-07 57.8 44 63.6
CSS0040002 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 8.5e-07 57.8 44 63.6
Dinv16657 Davidia involucrata HOM05D007106 ORTHO05D007770 2.5e-06 56.2 42 61.9
Eucgr.K02478 Eucalyptus grandis HOM05D007106 ORTHO05D007770 3.2e-06 55.8 33 75.8
FvH4_5g14840 Fragaria vesca HOM05D007106 ORTHO05D007770 3.2e-06 55.8 52 59.6
FAN18G2192 Fragaria x ananassa HOM05D007106 ORTHO05D007770 3.2e-06 55.8 52 59.6
RcHm_v2.0_Chr7g0181551 Rosa chinensis HOM05D007106 ORTHO05D007770 3.2e-06 55.8 52 61.5
Hund02644 Selenicereus undatus HOM05D007106 ORTHO05D007770 3.2e-06 55.8 62 51.6
Ciclev10022899m.g Citrus clementina HOM05D007106 ORTHO05D007770 4.2e-06 55.5 73 39.7
HanXRQChr05g0155941 Helianthus annuus HOM05D007106 ORTHO05D007770 5.5e-06 55.1 75 37.3
MD06G1194400 Malus domestica HOM05D007106 ORTHO05D007770 5.5e-06 55.1 48 52.1
FAN08G1525 Fragaria x ananassa HOM05D007106 ORTHO05D007770 9.4e-06 54.3 53 58.5


User provided reference genes

Program Settings