Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07210 Corylus avellana HOM05D004747 ORTHO05D164832 5.4e-119 431.0 220 100.0
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 4.6e-17 92.4 45 95.6
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 2.1e-14 83.6 43 88.4
Cfa004298 Carpinus fangiana HOM05D000682 ORTHO05D000510 5.2e-13 79.0 99 50.5
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 1.7e-11 73.9 42 76.2
CiPaw.01G036600 Carya illinoinensis HOM05D004747 ORTHO05D006051 4.1e-10 69.3 99 43.4
Haze_15104 Corylus avellana HOM05D004747 ORTHO05D006051 4.1e-10 69.3 125 40.8
CiPaw.02G016400 Carya illinoinensis HOM05D004747 ORTHO05D006051 9.2e-10 68.2 100 43.0
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 1.7e-08 63.9 42 73.8
Sed0017755 Sechium edule HOM05D004747 ORTHO05D006051 5.0e-08 62.4 99 42.4
Eucgr.H01267 Eucalyptus grandis HOM05D004747 ORTHO05D006051 6.6e-08 62.0 99 42.4
Atru.chr3.560 Acer truncatum HOM05D004747 ORTHO05D006051 8.6e-08 61.6 100 42.0
Dinv26824 Davidia involucrata HOM05D004747 ORTHO05D006051 1.5e-07 60.8 99 42.4
Sc16g0000910 Simmondsia chinensis HOM05D004747 ORTHO05D006051 1.5e-07 60.8 99 42.4
GSVIVG01018981001 Vitis vinifera HOM05D004747 ORTHO05D006051 2.5e-07 60.1 99 41.4
Cc07_g09390 Coffea canephora HOM05D004747 ORTHO05D006051 3.3e-07 59.7 100 41.0
Sed0005805 Sechium edule HOM05D004747 ORTHO05D006051 3.3e-07 59.7 99 42.4
Ciclev10025502m.g Citrus clementina HOM05D004747 ORTHO05D006051 4.3e-07 59.3 100 41.0
Nn1g05031 Nelumbo nucifera HOM05D004747 ORTHO05D006051 4.3e-07 59.3 97 40.2
QL06p045737 Quercus lobata HOM05D004747 ORTHO05D006051 4.3e-07 59.3 71 50.7
Cpa.g.sc337.7 Carica papaya HOM05D004747 ORTHO05D006051 5.6e-07 58.9 100 41.0
MELO3C007821.2 Cucumis melo HOM05D004747 ORTHO05D006051 5.6e-07 58.9 99 41.4
CsaV3_6G046180 Cucumis sativus L. HOM05D004747 ORTHO05D006051 5.6e-07 58.9 99 41.4
MBI16_g37699_MAGBIO Magnolia biondii HOM05D004747 ORTHO05D006051 9.5e-07 58.2 99 40.4
PGR102G2748 Punica granatum HOM05D004747 ORTHO05D006051 9.5e-07 58.2 99 41.4
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 9.5e-07 58.2 42 59.5
Duzib264G0087 Durio zibethinus HOM05D004747 ORTHO05D006051 1.2e-06 57.8 100 41.0
ClCG01G019460 Citrullus lanatus HOM05D004747 ORTHO05D006051 1.6e-06 57.4 99 40.4
Dinv39972 Davidia involucrata HOM05D004747 ORTHO05D006051 2.1e-06 57.0 100 40.0
Oeu007440.1 Olea europaea HOM05D004747 ORTHO05D006051 2.1e-06 57.0 99 39.4
Manes.02G092600 Manihot esculenta HOM05D004747 ORTHO05D006051 2.8e-06 56.6 99 40.4
Thecc.01G037400 Theobroma cacao HOM05D004747 ORTHO05D006051 2.8e-06 56.6 100 42.0
Gohir.A10G095200 Gossypium hirsutum HOM05D004747 ORTHO05D006051 3.6e-06 56.2 101 41.6
unitig_21.g20956 Utricularia gibba HOM05D004747 ORTHO05D006051 3.6e-06 56.2 99 39.4
ATR0733G064 Amborella trichopoda HOM05D004747 ORTHO05D006051 6.2e-06 55.5 99 39.4
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 6.2e-06 55.5 53 50.9
Gohir.D10G092700 Gossypium hirsutum HOM05D004747 ORTHO05D006051 8.1e-06 55.1 101 40.6
Gorai.011G101900 Gossypium raimondii HOM05D004747 ORTHO05D006051 8.1e-06 55.1 101 40.6
Lalb_Chr05g0212861 Lupinus albus HOM05D004747 ORTHO05D006051 8.1e-06 55.1 99 38.4


User provided reference genes

Program Settings