Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07152 Corylus avellana HOM05D005391 ORTHO05D006694 3.9e-68 261.9 196 100.0
Cfa018784 Carpinus fangiana HOM05D005391 ORTHO05D006694 2.8e-66 255.8 196 98.5
CiPaw.11G006200 Carya illinoinensis HOM05D005391 ORTHO05D006694 1.1e-57 227.3 197 67.0
CiPaw.12G044000 Carya illinoinensis HOM05D005391 ORTHO05D006694 1.2e-53 213.8 199 62.8
QL10p002677 Quercus lobata HOM05D005391 ORTHO05D006694 2.1e-50 203.0 195 78.5
Dinv23158 Davidia involucrata HOM05D005391 ORTHO05D006694 1.4e-49 200.3 196 67.3
MD15G1005900 Malus domestica HOM05D005391 ORTHO05D006694 2.2e-47 193.0 197 59.9
Cpa.g.sc13.100 Carica papaya HOM05D005391 ORTHO05D006694 4.9e-47 191.8 196 61.2
MD08G1006700 Malus domestica HOM05D005391 ORTHO05D006694 4.9e-47 191.8 197 59.4
Thecc.03G130500 Theobroma cacao HOM05D005391 ORTHO05D006694 4.2e-46 188.7 194 61.9
Prupe.1G358600 Prunus persica HOM05D005391 ORTHO05D006694 5.4e-46 188.3 196 58.2
Manes.14G050400 Manihot esculenta HOM05D005391 ORTHO05D006694 1.2e-45 187.2 208 56.7
vmacro16727 Vaccinium macrocarpon HOM05D005391 ORTHO05D006694 1.2e-45 187.2 190 57.4
Duzib205G0229 Durio zibethinus HOM05D005391 ORTHO05D006694 3.5e-45 185.7 208 67.3
Gohir.A07G050600 Gossypium hirsutum HOM05D005391 ORTHO05D006694 1.7e-44 183.3 192 56.2
CANSAT80G1472 Cannabis sativa HOM05D005391 ORTHO05D006694 2.3e-44 183.0 201 53.7
Gohir.D07G055100 Gossypium hirsutum HOM05D005391 ORTHO05D006694 2.3e-44 183.0 200 55.0
Gorai.001G058300 Gossypium raimondii HOM05D005391 ORTHO05D006694 2.3e-44 183.0 200 55.0
Ciclev10032864m.g Citrus clementina HOM05D005391 ORTHO05D006694 3.9e-44 182.2 198 60.1
Sed0002904 Sechium edule HOM05D005391 ORTHO05D006694 3.9e-44 182.2 196 55.6
Atru.chr6.1808 Acer truncatum HOM05D005391 ORTHO05D006694 6.6e-44 181.4 198 54.0
CsaV3_1G000500 Cucumis sativus L. HOM05D005391 ORTHO05D006694 6.6e-44 181.4 201 61.7
CSS0043065 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 3.3e-43 179.1 196 55.1
MELO3C026202.2 Cucumis melo HOM05D005391 ORTHO05D006694 3.3e-43 179.1 201 59.2
FvH4_2g37750 Fragaria vesca HOM05D005391 ORTHO05D006694 3.3e-43 179.1 197 55.8
COL.COLO4_28143 Corchorus olitorius HOM05D005391 ORTHO05D006694 4.3e-43 178.7 195 54.9
TWI23G0649 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 1.3e-42 177.2 197 54.3
TAR371G0831 Trochodendron aralioides HOM05D005391 ORTHO05D006694 1.3e-42 177.2 188 53.7
RcHm_v2.0_Chr6g0303761 Rosa chinensis HOM05D005391 ORTHO05D006694 1.6e-42 176.8 199 71.9
CSS0003205 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 2.1e-42 176.4 196 65.8
CSS0033680 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 2.1e-42 176.4 196 65.8
TWI14G1436 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 4.8e-42 175.3 187 60.4
Actinidia36818 Actinidia chinensis HOM05D005391 ORTHO05D006694 8.1e-42 174.5 184 55.4
TAR629G0488 Trochodendron aralioides HOM05D005391 ORTHO05D006694 1.8e-41 173.3 196 53.6
FAN15G0439 Fragaria x ananassa HOM05D005391 ORTHO05D006694 2.4e-41 172.9 197 54.8
Glyma.04G196600 Glycine max HOM05D005391 ORTHO05D006694 2.4e-41 172.9 195 62.1
FAN20G0870 Fragaria x ananassa HOM05D005391 ORTHO05D006694 3.1e-41 172.6 197 54.3
FAN27G0224 Fragaria x ananassa HOM05D005391 ORTHO05D006694 5.3e-41 171.8 197 54.8
MBI07_g28244_MAGBIO Magnolia biondii HOM05D005391 ORTHO05D006694 1.2e-40 170.6 183 54.1
Nn4g22289 Nelumbo nucifera HOM05D005391 ORTHO05D006694 1.2e-40 170.6 188 54.8
Sabra12G0072400 Salix brachista HOM05D005391 ORTHO05D006694 1.5e-40 170.2 184 64.7
Ca_16053_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 2.6e-40 169.5 200 54.0
Potri.012G099200 Populus trichocarpa HOM05D005391 ORTHO05D006694 2.6e-40 169.5 184 60.9
Nn3g16438 Nelumbo nucifera HOM05D005391 ORTHO05D006694 4.5e-40 168.7 196 50.5
Peaxi162Scf00045g01932 Petunia axillaris HOM05D005391 ORTHO05D006694 5.8e-40 168.3 197 51.8
Potri.015G097800 Populus trichocarpa HOM05D005391 ORTHO05D006694 5.8e-40 168.3 186 53.8
Lalb_Chr23g0273681 Lupinus albus HOM05D005391 ORTHO05D006694 9.9e-40 167.5 195 59.0
Nitab4.5_0000264g0120 Nicotiana tabacum HOM05D005391 ORTHO05D006694 9.9e-40 167.5 196 57.1
Sopen08g002620 Solanum pennellii HOM05D005391 ORTHO05D006694 1.3e-39 167.2 202 68.8
Rhsim12G0176000 Rhododendron simsii HOM05D005391 ORTHO05D006694 1.7e-39 166.8 199 53.8
arahy.Tifrunner.gnm1.ann1.S11VKX Arachis hypogaea HOM05D005391 ORTHO05D006694 2.2e-39 166.4 204 71.1
Solyc08g006670.3 Solanum lycopersicum HOM05D005391 ORTHO05D006694 2.2e-39 166.4 202 68.8
PSO478G3696 Papaver somniferum HOM05D005391 ORTHO05D006694 4.9e-39 165.2 189 52.4
Phvul.009G165600 Phaseolus vulgaris HOM05D005391 ORTHO05D006694 4.9e-39 165.2 197 64.5
TPR.G14215 Trifolium pratense HOM05D005391 ORTHO05D006694 4.9e-39 165.2 200 54.5
Lj5A95T81 Lonicera japonica HOM05D005391 ORTHO05D006694 6.4e-39 164.9 218 58.3
PSO017G3900 Papaver somniferum HOM05D005391 ORTHO05D006694 8.4e-39 164.5 189 51.9
DCAR_016386 Daucus carota HOM05D005391 ORTHO05D006694 1.4e-38 163.7 196 51.5
Glyma.06G169200 Glycine max HOM05D005391 ORTHO05D006694 2.4e-38 162.9 184 60.9
PGSC0003DMG400026284 Solanum tuberosum HOM05D005391 ORTHO05D006694 2.4e-38 162.9 202 53.5
THA.LOC104798944 Tarenaya hassleriana HOM05D005391 ORTHO05D006694 3.2e-38 162.5 200 55.5
Cc08_g07550 Coffea canephora HOM05D005391 ORTHO05D006694 4.2e-38 162.2 211 54.0
Medtr3g099130 Medicago truncatula HOM05D005391 ORTHO05D006694 7.1e-38 161.4 196 50.5
GSVIVG01008565001 Vitis vinifera HOM05D005391 ORTHO05D006694 7.1e-38 161.4 184 59.8
FAN26G2573 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.6e-37 160.2 195 51.8
Psat5g051960 Pisum sativum HOM05D005391 ORTHO05D006694 1.6e-37 160.2 186 51.6
arahy.Tifrunner.gnm1.ann1.3A01UJ Arachis hypogaea HOM05D005391 ORTHO05D006694 3.5e-37 159.1 212 68.4
Lj1g0005006 Lotus japonicus HOM05D005391 ORTHO05D006694 3.5e-37 159.1 195 51.3
MSTRG.25825 Avicennia marina HOM05D005391 ORTHO05D006694 6.7e-36 154.8 221 58.4
Sabra15G0118500 Salix brachista HOM05D005391 ORTHO05D006694 6.7e-36 154.8 198 49.5
Lsat_1_v5_gn_4_81240 Lactuca sativa HOM05D005391 ORTHO05D006694 2.5e-35 152.9 196 49.0
Oeu009657.1 Olea europaea HOM05D005391 ORTHO05D006694 2.5e-35 152.9 213 51.2
A06p30110 Brassica napus HOM05D005391 ORTHO05D006694 3.3e-35 152.5 183 55.2
BraA06t25962Z Brassica rapa HOM05D005391 ORTHO05D006694 3.3e-35 152.5 183 55.2
Sp2g26560 Schrenkiella parvula HOM05D005391 ORTHO05D006694 3.3e-35 152.5 183 50.8
AT5G63480 Arabidopsis thaliana HOM05D005391 ORTHO05D006694 4.3e-35 152.1 183 71.0
CARHR277330 Cardamine hirsuta HOM05D005391 ORTHO05D006694 4.3e-35 152.1 183 53.0
Aa31LG1G18560 Aethionema arabicum HOM05D005391 ORTHO05D006694 5.6e-35 151.8 201 54.7
C03p62960 Brassica napus HOM05D005391 ORTHO05D006694 7.4e-35 151.4 183 54.6
BolC3t18550H Brassica oleracea HOM05D005391 ORTHO05D006694 7.4e-35 151.4 183 54.6
ClCG06G017970 Citrullus lanatus HOM05D005391 ORTHO05D006694 9.6e-35 151.0 248 46.8
BcaB02g09758 Brassica carinata HOM05D005391 ORTHO05D006694 1.6e-34 150.2 183 63.9
Thhalv10004987m.g Eutrema salsugineum HOM05D005391 ORTHO05D006694 2.1e-34 149.8 185 58.9
AL8G40540 Arabidopsis lyrata HOM05D005391 ORTHO05D006694 2.8e-34 149.4 183 55.7
BcaB04g19920 Brassica carinata HOM05D005391 ORTHO05D006694 8.1e-34 147.9 183 51.9
SalBow8G3527 Salvia bowleyana HOM05D005391 ORTHO05D006694 8.1e-34 147.9 212 61.8
Hund08624 Selenicereus undatus HOM05D005391 ORTHO05D006694 1.1e-33 147.5 194 47.4
SGA_v2.0_scaffold169G38603 Striga asiatica HOM05D005391 ORTHO05D006694 1.4e-33 147.1 204 51.5
Aqoxy3G00618 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 3.1e-33 146.0 184 70.7
arahy.Tifrunner.gnm1.ann1.CP8X4X Arachis hypogaea HOM05D005391 ORTHO05D006694 3.1e-33 146.0 246 58.9
arahy.Tifrunner.gnm1.ann1.HT4698 Arachis hypogaea HOM05D005391 ORTHO05D006694 3.1e-33 146.0 246 58.9
Migut.E01449 Erythranthe guttata HOM05D005391 ORTHO05D006694 3.1e-33 146.0 214 50.9
Ah.03g143420 Amaranthus hybridus HOM05D005391 ORTHO05D006694 4.0e-33 145.6 193 46.1
AUR62003784 Chenopodium quinoa HOM05D005391 ORTHO05D006694 6.9e-33 144.8 195 47.2
Carub.0008s2418 Capsella rubella HOM05D005391 ORTHO05D006694 9.0e-33 144.4 183 59.0
AUR62002017 Chenopodium quinoa HOM05D005391 ORTHO05D006694 1.2e-32 144.1 193 47.2
ATR0171G017 Amborella trichopoda HOM05D005391 ORTHO05D006694 4.5e-32 142.1 186 46.2
A09p08280 Brassica napus HOM05D005391 ORTHO05D006694 7.6e-32 141.4 183 49.2
BraA09t36478Z Brassica rapa HOM05D005391 ORTHO05D006694 7.6e-32 141.4 183 49.2
ECA232G1626 Erigeron canadensis HOM05D005391 ORTHO05D006694 9.9e-32 141.0 199 44.2
EL10Ac6g15093 Beta vulgaris HOM05D005391 ORTHO05D006694 3.8e-31 139.0 195 45.6
unitig_32.g10935 Utricularia gibba HOM05D005391 ORTHO05D006694 6.4e-31 138.3 222 49.5
Aqoxy3G01572 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 1.6e-29 133.7 184 46.7
CDE04G2377 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 2.7e-29 132.9 182 46.7
BolC9t53848H Brassica oleracea HOM05D005391 ORTHO05D006694 3.5e-29 132.5 177 53.7
CDE10G0912 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 6.0e-29 131.7 184 45.7
Nitab4.5_0001362g0010 Nicotiana tabacum HOM05D005391 ORTHO05D006694 3.3e-27 125.9 197 55.3
BcaC04g23332 Brassica carinata HOM05D005391 ORTHO05D006694 4.3e-27 125.6 177 52.5
C09p09360 Brassica napus HOM05D005391 ORTHO05D006694 4.3e-27 125.6 177 52.5
Zm00001eb421130 Zea mays HOM05D005391 ORTHO05D006694 2.1e-26 123.2 181 44.2
SEGI_01116 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 1.2e-24 117.5 192 45.3
Actinidia08882 Actinidia chinensis HOM05D005391 ORTHO05D006694 5.8e-24 115.2 151 48.3
Ca_01190_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 7.6e-24 114.8 89 66.3
HanXRQChr09g0273301 Helianthus annuus HOM05D005391 ORTHO05D006694 3.2e-22 109.4 157 43.3
FAN23G2258 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.3e-20 104.0 164 46.3
Oeu040668.1 Olea europaea HOM05D005391 ORTHO05D006694 6.7e-20 101.7 174 40.8
DCAR_021623 Daucus carota HOM05D005391 ORTHO05D006694 1.1e-19 100.9 182 35.2
HPP92_023119 Vanilla planifolia HOM05D005391 ORTHO05D006694 9.7e-19 97.8 183 42.6
Ah.07g204620 Amaranthus hybridus HOM05D005391 ORTHO05D006694 4.8e-18 95.5 160 40.6
CSS0049043 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.4e-17 94.0 67 70.1
Sc04g0000550 Simmondsia chinensis HOM05D005391 ORTHO05D006694 3.1e-17 92.8 146 42.5
VMungo1309G0665 Vigna mungo HOM05D005391 ORTHO05D006694 3.1e-17 92.8 134 60.4
Pp3c7_3280 Physcomitrium patens HOM05D005391 ORTHO05D006694 2.6e-16 89.7 188 33.0
CSS0010891 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 4.5e-16 89.0 130 46.9
FAN23G0903 Fragaria x ananassa HOM05D005391 ORTHO05D006694 5.9e-16 88.6 193 39.9
Mapoly0007s0225 Marchantia polymorpha HOM05D005391 ORTHO05D006694 2.2e-15 86.7 179 34.6
SMO364G0653 Selaginella moellendorffii HOM05D005391 ORTHO05D006694 2.9e-15 86.3 175 32.6
AagrBONN_evm.TU.Sc2ySwM_369.268 Anthoceros agrestis HOM05D005391 ORTHO05D006694 7.2e-14 81.6 194 37.6
Gohir.1Z049409 Gossypium hirsutum HOM05D005391 ORTHO05D006694 6.7e-12 75.1 118 40.7
Os04g0388601 Oryza sativa ssp. japonica HOM05D005391 ORTHO05D006694 2.5e-11 73.2 163 56.4
Zm00001eb085410 Zea mays HOM05D005391 ORTHO05D006694 1.1e-06 57.8 111 56.8
CDE10G0174 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 5.5e-06 55.5 61 54.1


User provided reference genes

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