Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 2.9e-123 445.3 229 100.0
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 3.6e-118 428.3 229 96.9
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 1.5e-108 396.4 229 90.0
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 4.2e-98 361.7 282 71.3
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 1.4e-93 346.7 229 76.9
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 1.4e-93 346.7 229 77.3
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 6.9e-93 344.4 229 79.0
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 6.5e-91 337.8 229 77.7
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 3.2e-90 335.5 229 76.4
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 7.2e-90 334.3 230 77.0
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 7.2e-90 334.3 230 75.2
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 1.2e-89 333.6 231 77.1
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 1.8e-88 329.7 226 75.7
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 1.1e-87 327.0 223 75.8
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 1.5e-87 326.6 238 75.6
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 2.5e-87 325.9 230 74.8
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 9.7e-87 323.9 230 76.1
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 1.7e-86 323.2 226 73.0
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 3.7e-86 322.0 226 73.0
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.3e-86 321.2 226 73.0
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 8.2e-86 320.9 226 75.2
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 5.3e-85 318.2 226 73.5
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.5e-84 316.6 226 72.1
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 4.5e-84 315.1 230 72.6
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 1.0e-83 313.9 231 71.4
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 1.3e-83 313.5 221 74.2
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 2.9e-83 312.4 196 80.1
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 3.8e-83 312.0 232 70.3
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 5.0e-83 311.6 196 79.6
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 6.5e-83 311.2 229 72.5
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 1.4e-82 310.1 229 71.6
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 2.7e-81 305.8 238 73.5
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 2.7e-81 305.8 230 70.4
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 3.6e-81 305.4 238 72.7
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 6.1e-81 304.7 225 70.2
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 2.3e-80 302.8 230 71.3
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 3.9e-80 302.0 225 71.1
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 6.7e-80 301.2 229 70.3
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 2.0e-79 299.7 232 71.1
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 2.6e-79 299.3 229 71.2
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 5.7e-79 298.1 194 78.9
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 1.3e-78 297.0 232 69.0
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 2.8e-78 295.8 234 67.1
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 2.8e-78 295.8 207 73.9
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 4.8e-78 295.0 230 70.4
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 1.4e-77 293.5 226 69.5
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.8e-77 293.1 226 68.6
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 2.4e-77 292.7 201 75.6
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 3.1e-77 292.4 220 70.5
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 4.1e-77 292.0 228 69.3
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 1.5e-76 290.0 211 70.6
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 3.5e-76 288.9 196 76.0
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 4.5e-76 288.5 208 70.2
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 7.7e-76 287.7 232 66.8
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 2.9e-75 285.8 240 65.0
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 3.8e-75 285.4 230 66.5
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 1.1e-74 283.9 189 77.8
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 4.7e-73 278.5 225 65.3
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 8.0e-73 277.7 172 80.2
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 1.0e-72 277.3 196 73.5
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 5.2e-72 275.0 199 70.4
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 6.7e-72 274.6 215 68.4
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 2.6e-71 272.7 222 65.3
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 4.4e-71 271.9 171 77.2
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 9.7e-71 270.8 233 63.5
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 9.7e-71 270.8 215 67.9
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 2.8e-70 269.2 176 77.8
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 4.8e-70 268.5 235 63.8
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 8.2e-70 267.7 236 63.6
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 1.8e-69 266.5 235 63.0
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 9.1e-69 264.2 190 68.9
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 4.5e-68 261.9 244 61.1
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 5.9e-68 261.5 223 63.7
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 1.7e-67 260.0 188 70.7
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 5.0e-67 258.5 239 60.7
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 6.5e-67 258.1 239 61.5
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 1.1e-66 257.3 152 78.3
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 1.9e-66 256.5 235 62.6
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 3.2e-66 255.8 235 62.6
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 5.5e-66 255.0 224 62.9
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 7.2e-66 254.6 233 60.9
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 7.2e-66 254.6 233 60.9
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 2.1e-65 253.1 246 60.6
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 8.8e-64 247.7 206 66.0
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 1.2e-63 247.3 223 61.0
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 2.6e-63 246.1 266 54.5
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 3.7e-62 242.3 185 63.8
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 1.1e-61 240.7 265 53.6
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 2.4e-61 239.6 228 60.1
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 1.3e-59 233.8 137 81.8
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 6.6e-51 204.9 231 55.8
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 3.5e-44 182.6 155 61.3
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 5.6e-42 175.3 99 81.8
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 7.3e-42 174.9 99 83.8
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 3.1e-40 169.5 154 64.3
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 5.2e-40 168.7 159 57.2
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 3.2e-37 159.5 117 77.8
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 4.1e-37 159.1 195 45.6
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 2.7e-36 156.4 99 78.8
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 2.3e-32 143.3 100 76.0
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 6.4e-30 135.2 152 46.1
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 1.2e-25 120.9 63 88.9
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 2.8e-25 119.8 111 55.0
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.8e-24 117.1 64 82.8
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 2.3e-19 100.1 144 46.5
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 1.5e-18 97.4 100 61.0
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 4.4e-15 85.9 61 73.8
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 5.8e-15 85.5 100 54.0
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 7.6e-15 85.1 58 72.4
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.4e-14 82.0 60 71.7
MCO03G440 Micromonas commoda HOM05D007115 ORTHO05D008923 1.3e-09 67.8 146 31.5
PRCOL_00005130 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 1.3e-09 67.8 102 39.2
FAN04G0070 Fragaria x ananassa HOM05D007115 ORTHO05D008923 4.0e-08 62.8 53 62.3


User provided reference genes

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