Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07109 Corylus avellana HOM05D005570 ORTHO05D007368 6.1e-89 330.9 175 100.0
Cfa018716 Carpinus fangiana HOM05D005570 ORTHO05D007368 1.1e-87 326.6 175 98.9
CSS0001120 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 3.2e-66 255.4 169 79.3
CiPaw.01G284700 Carya illinoinensis HOM05D005570 ORTHO05D007368 7.2e-66 254.2 174 75.9
Hma1.2p1_0599F.1_g187020 Hydrangea macrophylla HOM05D005570 ORTHO05D007368 3.9e-64 248.4 173 76.9
QL10p000758 Quercus lobata HOM05D005570 ORTHO05D007368 1.5e-63 246.5 179 75.4
CSS0020937 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 1.3e-62 243.4 169 76.3
Manes.13G060500 Manihot esculenta HOM05D005570 ORTHO05D007368 3.7e-62 241.9 170 72.9
PGR044G2338 Punica granatum HOM05D005570 ORTHO05D007368 3.7e-62 241.9 171 74.9
Lj9C217G3 Lonicera japonica HOM05D005570 ORTHO05D007368 1.1e-61 240.4 172 72.7
Ciclev10016955m.g Citrus clementina HOM05D005570 ORTHO05D007368 1.4e-61 240.0 170 71.8
Duzib213G1053 Durio zibethinus HOM05D005570 ORTHO05D007368 1.4e-61 240.0 171 73.7
Atru.chr6.3424 Acer truncatum HOM05D005570 ORTHO05D007368 1.8e-61 239.6 167 74.9
ClCG06G018310 Citrullus lanatus HOM05D005570 ORTHO05D007368 2.4e-61 239.2 171 73.7
PGR031G1532 Punica granatum HOM05D005570 ORTHO05D007368 2.4e-61 239.2 171 74.3
Aqoxy2G01347 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 7.0e-61 237.7 176 72.2
Rhsim04G0030600 Rhododendron simsii HOM05D005570 ORTHO05D007368 7.0e-61 237.7 162 77.2
Peaxi162Scf00612g00133 Petunia axillaris HOM05D005570 ORTHO05D007368 9.1e-61 237.3 163 76.1
Solyc07g042710.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 1.6e-60 236.5 163 74.8
Sopen07g023810 Solanum pennellii HOM05D005570 ORTHO05D007368 1.6e-60 236.5 163 74.8
Aqoxy7G00316 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 3.5e-60 235.3 175 72.0
Eucgr.K01395 Eucalyptus grandis HOM05D005570 ORTHO05D007368 3.5e-60 235.3 166 72.3
Lsat_1_v5_gn_9_102501 Lactuca sativa HOM05D005570 ORTHO05D007368 3.5e-60 235.3 172 70.3
TWI18G0239 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 3.5e-60 235.3 170 70.0
Potri.014G169500 Populus trichocarpa HOM05D005570 ORTHO05D007368 7.7e-60 234.2 172 69.8
Sabra14G0129400 Salix brachista HOM05D005570 ORTHO05D007368 1.3e-59 233.4 171 69.0
CsaV3_1G000130 Cucumis sativus L. HOM05D005570 ORTHO05D007368 1.7e-59 233.0 171 71.3
Sc21g0000460 Simmondsia chinensis HOM05D005570 ORTHO05D007368 1.7e-59 233.0 170 70.0
Thecc.07G134300 Theobroma cacao HOM05D005570 ORTHO05D007368 1.7e-59 233.0 167 71.9
HanXRQChr03g0075001 Helianthus annuus HOM05D005570 ORTHO05D007368 3.8e-59 231.9 167 70.7
Gohir.D01G037900 Gossypium hirsutum HOM05D005570 ORTHO05D007368 1.9e-58 229.6 155 75.5
Gorai.002G046300 Gossypium raimondii HOM05D005570 ORTHO05D007368 1.9e-58 229.6 155 75.5
Gohir.A01G047200 Gossypium hirsutum HOM05D005570 ORTHO05D007368 2.5e-58 229.2 155 76.1
Nitab4.5_0005376g0020 Nicotiana tabacum HOM05D005570 ORTHO05D007368 2.5e-58 229.2 172 68.0
Cc02_g29600 Coffea canephora HOM05D005570 ORTHO05D007368 3.2e-58 228.8 164 73.8
Sed0027705 Sechium edule HOM05D005570 ORTHO05D007368 3.2e-58 228.8 171 69.0
MD14G1148400 Malus domestica HOM05D005570 ORTHO05D007368 5.5e-58 228.0 170 71.2
Nitab4.5_0005354g0010 Nicotiana tabacum HOM05D005570 ORTHO05D007368 5.5e-58 228.0 172 67.4
Migut.H01280 Erythranthe guttata HOM05D005570 ORTHO05D007368 7.2e-58 227.6 172 66.9
TAR374G1095 Trochodendron aralioides HOM05D005570 ORTHO05D007368 7.2e-58 227.6 173 68.8
MSTRG.12255 Avicennia marina HOM05D005570 ORTHO05D007368 1.2e-57 226.9 172 68.0
COL.COLO4_17467 Corchorus olitorius HOM05D005570 ORTHO05D007368 3.6e-57 225.3 170 68.2
DCAR_008745 Daucus carota HOM05D005570 ORTHO05D007368 3.6e-57 225.3 157 72.6
Prupe.5G143000 Prunus persica HOM05D005570 ORTHO05D007368 3.6e-57 225.3 169 72.8
Carub.0003s2602 Capsella rubella HOM05D005570 ORTHO05D007368 4.7e-57 224.9 164 68.9
Nn4g22113 Nelumbo nucifera HOM05D005570 ORTHO05D007368 6.1e-57 224.6 159 73.0
Aa31LG7G6130 Aethionema arabicum HOM05D005570 ORTHO05D007368 1.0e-56 223.8 158 70.3
PSO357G0372 Papaver somniferum HOM05D005570 ORTHO05D007368 1.0e-56 223.8 175 67.4
GSVIVG01018573001 Vitis vinifera HOM05D005570 ORTHO05D007368 1.4e-56 223.4 172 65.1
AT2G04340 Arabidopsis thaliana HOM05D005570 ORTHO05D007368 1.8e-56 223.0 164 68.9
MD06G1132000 Malus domestica HOM05D005570 ORTHO05D007368 2.3e-56 222.6 164 72.6
MBI14_g24038_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 3.0e-56 222.2 176 67.0
Sp3g23170 Schrenkiella parvula HOM05D005570 ORTHO05D007368 3.0e-56 222.2 164 68.3
AUR62019308 Chenopodium quinoa HOM05D005570 ORTHO05D007368 1.2e-55 220.3 164 70.1
Actinidia07853 Actinidia chinensis HOM05D005570 ORTHO05D007368 1.5e-55 219.9 169 67.5
PSO063G1837 Papaver somniferum HOM05D005570 ORTHO05D007368 1.5e-55 219.9 177 66.1
CARHR102200 Cardamine hirsuta HOM05D005570 ORTHO05D007368 2.6e-55 219.2 163 68.7
AL3G42010 Arabidopsis lyrata HOM05D005570 ORTHO05D007368 3.4e-55 218.8 164 67.7
BcaB06g26780 Brassica carinata HOM05D005570 ORTHO05D007368 3.4e-55 218.8 165 68.5
Thhalv10002687m.g Eutrema salsugineum HOM05D005570 ORTHO05D007368 4.4e-55 218.4 164 67.1
FAN18G0853 Fragaria x ananassa HOM05D005570 ORTHO05D007368 4.4e-55 218.4 172 67.4
RcHm_v2.0_Chr7g0188821 Rosa chinensis HOM05D005570 ORTHO05D007368 4.4e-55 218.4 170 68.2
FvH4_5g09330 Fragaria vesca HOM05D005570 ORTHO05D007368 5.7e-55 218.0 171 67.3
FAN04G1041 Fragaria x ananassa HOM05D005570 ORTHO05D007368 9.8e-55 217.2 172 66.9
FAN13G2066 Fragaria x ananassa HOM05D005570 ORTHO05D007368 1.3e-54 216.9 172 66.9
BraA07t28466Z Brassica rapa HOM05D005570 ORTHO05D007368 1.7e-54 216.5 167 67.1
AUR62000128 Chenopodium quinoa HOM05D005570 ORTHO05D007368 1.7e-54 216.5 167 68.9
A07p06720 Brassica napus HOM05D005570 ORTHO05D007368 2.8e-54 215.7 161 68.3
CSS0039609 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 3.7e-54 215.3 169 69.8
C07p10300 Brassica napus HOM05D005570 ORTHO05D007368 4.8e-54 214.9 159 68.6
BcaC06g35864 Brassica carinata HOM05D005570 ORTHO05D007368 6.3e-54 214.5 159 68.6
BolC7t41480H Brassica oleracea HOM05D005570 ORTHO05D007368 6.3e-54 214.5 159 68.6
Ca_18776_v3 Cicer arietinum L. HOM05D005570 ORTHO05D007368 8.3e-54 214.2 163 66.9
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 1.4e-53 213.4 154 66.9
PSO063G6961 Papaver somniferum HOM05D005570 ORTHO05D007368 1.4e-53 213.4 177 64.4
arahy.Tifrunner.gnm1.ann1.66C0B7 Arachis hypogaea HOM05D005570 ORTHO05D007368 2.4e-53 212.6 161 64.6
arahy.Tifrunner.gnm1.ann1.TWVE3E Arachis hypogaea HOM05D005570 ORTHO05D007368 2.4e-53 212.6 161 64.6
PSO421G0324 Papaver somniferum HOM05D005570 ORTHO05D007368 4.1e-53 211.8 175 62.9
ECA240G0244 Erigeron canadensis HOM05D005570 ORTHO05D007368 2.0e-52 209.5 142 74.6
Oeu015172.1 Olea europaea HOM05D005570 ORTHO05D007368 2.0e-52 209.5 143 78.3
Glyma.07G223300 Glycine max HOM05D005570 ORTHO05D007368 3.5e-52 208.8 163 65.6
unitig_26.g9513 Utricularia gibba HOM05D005570 ORTHO05D007368 3.5e-52 208.8 162 66.0
VMungo0251G2804 Vigna mungo HOM05D005570 ORTHO05D007368 4.5e-52 208.4 162 64.8
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 5.9e-52 208.0 154 66.9
Psat7g132520 Pisum sativum HOM05D005570 ORTHO05D007368 1.0e-51 207.2 155 67.7
MELO3C026167.2 Cucumis melo HOM05D005570 ORTHO05D007368 1.3e-51 206.8 235 52.8
Lj1g0005707 Lotus japonicus HOM05D005570 ORTHO05D007368 1.7e-51 206.5 176 61.9
TPR.G11531 Trifolium pratense HOM05D005570 ORTHO05D007368 1.7e-51 206.5 163 65.6
Phvul.002G100000 Phaseolus vulgaris HOM05D005570 ORTHO05D007368 3.8e-51 205.3 162 63.0
Lalb_Chr09g0328771 Lupinus albus HOM05D005570 ORTHO05D007368 1.9e-50 203.0 164 64.0
EL10Ac4g10242 Beta vulgaris HOM05D005570 ORTHO05D007368 1.6e-49 199.9 205 55.1
Cpa.g.sc136.41 Carica papaya HOM05D005570 ORTHO05D007368 3.0e-48 195.7 151 70.2
Medtr4g083580 Medicago truncatula HOM05D005570 ORTHO05D007368 6.8e-48 194.5 160 62.5
HPP92_013643 Vanilla planifolia HOM05D005570 ORTHO05D007368 6.8e-48 194.5 165 60.0
ATR0751G216 Amborella trichopoda HOM05D005570 ORTHO05D007368 8.8e-48 194.1 163 62.0
CANSAT01G1761 Cannabis sativa HOM05D005570 ORTHO05D007368 1.2e-47 193.7 174 60.3
Lj8A137G54 Lonicera japonica HOM05D005570 ORTHO05D007368 3.4e-47 192.2 144 68.8
TWI36G1338 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 4.1e-45 185.3 141 67.4
vmacro09474 Vaccinium macrocarpon HOM05D005570 ORTHO05D007368 7.0e-45 184.5 152 66.4
TPR.G34081 Trifolium pratense HOM05D005570 ORTHO05D007368 3.5e-44 182.2 159 61.6
PSO421G0119 Papaver somniferum HOM05D005570 ORTHO05D007368 5.9e-44 181.4 142 65.5
Zm00001eb101470 Zea mays HOM05D005570 ORTHO05D007368 1.3e-43 180.3 171 55.6
Os09g0478400 Oryza sativa ssp. japonica HOM05D005570 ORTHO05D007368 5.0e-43 178.3 148 60.1
Ah.12g059860 Amaranthus hybridus HOM05D005570 ORTHO05D007368 6.6e-43 177.9 133 69.9
CDE10G0507 Ceratophyllum demersum HOM05D005570 ORTHO05D007368 1.5e-42 176.8 140 63.6
MBI14_g13534_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 3.3e-42 175.6 109 80.7
SGA_v2.0_scaffold96G29016 Striga asiatica HOM05D005570 ORTHO05D007368 9.5e-42 174.1 132 70.5
SGA_v2.0_scaffold317G48460 Striga asiatica HOM05D005570 ORTHO05D007368 9.2e-37 157.5 133 66.2
SGA_v2.0_scaffold317G48443 Striga asiatica HOM05D005570 ORTHO05D007368 5.9e-36 154.8 115 72.2
SEGI_08222 Sequoiadendron giganteum HOM05D005570 ORTHO05D007368 2.5e-34 149.4 129 60.5
Lsat_1_v5_gn_4_24381 Lactuca sativa HOM05D005570 ORTHO05D007368 7.3e-34 147.9 103 73.8
Rhsim04G0030300 Rhododendron simsii HOM05D005570 ORTHO05D007368 9.5e-34 147.5 90 81.1
Hund21535 Selenicereus undatus HOM05D005570 ORTHO05D007368 2.1e-33 146.4 91 78.0
Rhsim04G0030400 Rhododendron simsii HOM05D005570 ORTHO05D007368 3.4e-31 139.0 83 81.9
SGA_v2.0_scaffold28G12060 Striga asiatica HOM05D005570 ORTHO05D007368 1.3e-30 137.1 110 67.3
SGA_v2.0_scaffold2G00813 Striga asiatica HOM05D005570 ORTHO05D007368 1.3e-27 127.1 133 60.9
SGA_v2.0_scaffold323G48653 Striga asiatica HOM05D005570 ORTHO05D007368 1.5e-26 123.6 115 61.7
Gohir.D01G037901 Gossypium hirsutum HOM05D005570 ORTHO05D007368 2.5e-26 122.9 85 70.6
Mapoly0084s0063 Marchantia polymorpha HOM05D005570 ORTHO05D007368 4.0e-24 115.5 147 43.5
Pp3c22_13450 Physcomitrium patens HOM05D005570 ORTHO05D007368 4.0e-24 115.5 134 46.3
Solyc07g045260.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 1.2e-23 114.0 64 82.8
Glyma.20G022600 Glycine max HOM05D005570 ORTHO05D007368 4.1e-21 105.5 113 50.4
Potri.001G241100 Populus trichocarpa HOM05D005570 ORTHO05D007368 1.7e-19 100.1 87 60.9
Oeu031101.2 Olea europaea HOM05D005570 ORTHO05D007368 2.3e-19 99.8 55 87.3
Potri.014G169750 Populus trichocarpa HOM05D005570 ORTHO05D007368 3.9e-19 99.0 54 88.9
Lsat_1_v5_gn_4_72161 Lactuca sativa HOM05D005570 ORTHO05D007368 6.2e-17 91.7 53 81.1
Hund30621 Selenicereus undatus HOM05D005570 ORTHO05D007368 8.9e-16 87.8 71 67.6
Hund30622 Selenicereus undatus HOM05D005570 ORTHO05D007368 8.9e-16 87.8 71 67.6
SGA_v2.0_scaffold317G48459 Striga asiatica HOM05D005570 ORTHO05D007368 3.7e-14 82.4 58 70.7
Potri.001G240904 Populus trichocarpa HOM05D005570 ORTHO05D007368 4.9e-14 82.0 53 77.4
CBR_g57071 Chara braunii HOM05D001740 ORTHO05D001468 2.1e-09 66.6 85 31.8


User provided reference genes

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