Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07057 Corylus avellana HOM05D009231 ORTHO05D010800 7.4e-169 597.0 286 100.0
Cfa021528 Carpinus fangiana HOM05D009231 ORTHO05D010800 5.9e-118 427.9 247 84.6
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 3.8e-72 275.8 258 60.1
QL07p036848 Quercus lobata HOM05D009231 ORTHO05D010800 7.2e-55 218.4 273 50.2
Manes.08G032900 Manihot esculenta HOM05D009231 ORTHO05D010800 2.4e-42 176.8 260 45.8
Duzib093G0513 Durio zibethinus HOM05D009231 ORTHO05D010800 5.3e-42 175.6 261 42.9
Hma1.2p1_0079F.1_g041880 Hydrangea macrophylla HOM05D009231 ORTHO05D010800 4.5e-41 172.6 280 42.9
Manes.09G044800 Manihot esculenta HOM05D009231 ORTHO05D010800 1.7e-40 170.6 265 42.6
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 2.2e-40 170.2 274 41.6
Thecc.05G103300 Theobroma cacao HOM05D009231 ORTHO05D010800 6.1e-38 162.2 260 40.8
Actinidia03894 Actinidia chinensis HOM05D009231 ORTHO05D010800 1.8e-34 150.6 253 43.1
Prupe.7G095600 Prunus persica HOM05D015804 ORTHO05D010800 1.8e-34 150.6 255 42.0
Actinidia32045 Actinidia chinensis HOM05D009231 ORTHO05D010800 3.1e-34 149.8 256 39.5
Cpa.g.sc104.38 Carica papaya HOM05D009231 ORTHO05D010800 3.5e-33 146.4 274 40.1
TAR636G0160 Trochodendron aralioides HOM05D009231 ORTHO05D010800 2.2e-32 143.7 263 39.9
Gohir.A01G201800 Gossypium hirsutum HOM05D009231 ORTHO05D010800 1.1e-31 141.4 259 39.0
TAR633G1440 Trochodendron aralioides HOM05D009231 ORTHO05D010800 3.2e-31 139.8 293 36.5
RcHm_v2.0_Chr3g0475841 Rosa chinensis HOM05D015804 ORTHO05D010800 9.4e-31 138.3 259 39.0
Dinv31754 Davidia involucrata HOM05D009231 ORTHO05D010800 5.2e-29 132.5 174 46.0
Gorai.002G235600 Gossypium raimondii HOM05D009231 ORTHO05D010800 6.7e-29 132.1 259 38.2
Gohir.D01G191700 Gossypium hirsutum HOM05D009231 ORTHO05D010800 1.7e-24 117.5 185 42.2
FvH4_6g20250 Fragaria vesca HOM05D015804 ORTHO05D010800 9.4e-23 111.7 263 37.6
Nn6g34706 Nelumbo nucifera HOM05D009231 ORTHO05D010800 1.2e-22 111.3 208 41.3
MD12G1039600 Malus domestica HOM05D015804 ORTHO05D010800 2.1e-22 110.5 196 40.3
Nn2g14291 Nelumbo nucifera HOM05D009231 ORTHO05D010800 2.1e-22 110.5 203 37.9
Potri.006G203800 Populus trichocarpa HOM05D009231 ORTHO05D010800 2.1e-22 110.5 251 37.1
FAN14G2856 Fragaria x ananassa HOM05D015804 ORTHO05D010800 3.6e-22 109.8 263 37.3
PGR142G1154 Punica granatum HOM05D009231 ORTHO05D010800 1.8e-21 107.5 276 32.6
FAN05G3991 Fragaria x ananassa HOM05D015804 ORTHO05D010800 1.5e-20 104.4 264 36.4
COL.COLO4_29583 Corchorus olitorius HOM05D009231 ORTHO05D010800 1.3e-19 101.3 171 40.9
FAN09G0232 Fragaria x ananassa HOM05D015804 ORTHO05D010800 2.8e-19 100.1 265 36.6
FAN02G3496 Fragaria x ananassa HOM05D015804 ORTHO05D010800 4.1e-18 96.3 263 35.4
FAN05G1852 Fragaria x ananassa HOM05D015804 ORTHO05D010800 4.1e-18 96.3 266 34.6
Duzib106G2060 Durio zibethinus HOM05D009231 ORTHO05D010800 4.2e-15 86.3 135 42.2
Sc20g0006710 Simmondsia chinensis HOM05D009231 ORTHO05D010800 1.6e-14 84.3 266 32.7
Hund03818 Selenicereus undatus HOM05D009231 ORTHO05D010800 2.8e-14 83.6 276 30.1
Cc06_g06490 Coffea canephora HOM05D019826 ORTHO05D022411 4.7e-14 82.8 295 31.5
Nitab4.5_0002958g0010 Nicotiana tabacum HOM05D019826 ORTHO05D022411 5.7e-12 75.9 224 32.1
Oeu052622.2 Olea europaea HOM05D022101 ORTHO05D022209 3.7e-11 73.2 261 30.7
Aqoxy1G00673 Aquilegia oxysepala HOM05D009231 ORTHO05D010800 5.4e-10 69.3 293 28.0
HPP92_023078 Vanilla planifolia HOM05D009231 ORTHO05D010800 9.2e-10 68.6 270 28.1
CiPaw.14G034700 Carya illinoinensis HOM05D024410 ORTHO05D024910 1.6e-09 67.8 259 23.9
CDE08G0923 Ceratophyllum demersum HOM05D009231 ORTHO05D010800 6.6e-08 62.4 217 29.5
Ah.08g210080 Amaranthus hybridus HOM05D009231 ORTHO05D010800 2.5e-07 60.5 262 28.2
PSO339G1113 Papaver somniferum HOM05D027017 ORTHO05D010800 2.5e-07 60.5 209 28.7
Sabra06G0157100 Salix brachista HOM05D009231 ORTHO05D010800 9.5e-07 58.5 265 26.8
PGSC0003DMG400016422 Solanum tuberosum HOM05D019826 ORTHO05D022411 4.7e-06 56.2 207 29.5


User provided reference genes

Program Settings