Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_06904 Corylus avellana HOM05D005610 ORTHO05D006181 1.8e-119 432.6 215 100.0
Cpa.g.sc152.66 Carica papaya HOM05D005610 ORTHO05D006181 2.0e-54 216.5 116 84.5
QL10p003579 Quercus lobata HOM05D005610 ORTHO05D006181 7.8e-54 214.5 115 86.1
Thecc.06G231600 Theobroma cacao HOM05D005610 ORTHO05D006181 7.8e-54 214.5 113 86.7
COL.COLO4_31865 Corchorus olitorius HOM05D005610 ORTHO05D006181 1.3e-53 213.8 115 85.2
Duzib235G0930 Durio zibethinus HOM05D005610 ORTHO05D006181 1.3e-53 213.8 116 84.5
CiPaw.10G076800 Carya illinoinensis HOM05D005610 ORTHO05D006181 1.7e-53 213.4 116 86.2
Gohir.A06G152700 Gossypium hirsutum HOM05D005610 ORTHO05D006181 1.7e-53 213.4 116 83.6
Thecc.10G134700 Theobroma cacao HOM05D005610 ORTHO05D006181 3.0e-53 212.6 113 85.8
Thecc.10G135500 Theobroma cacao HOM05D005610 ORTHO05D006181 8.6e-53 211.1 113 85.0
Gorai.010G185800 Gossypium raimondii HOM05D005610 ORTHO05D006181 1.5e-52 210.3 116 83.6
ClCG07G002910 Citrullus lanatus HOM05D005610 ORTHO05D006181 2.5e-52 209.5 112 83.9
Prupe.8G115200 Prunus persica HOM05D005610 ORTHO05D006181 3.3e-52 209.1 116 82.8
MELO3C008876.2 Cucumis melo HOM05D005610 ORTHO05D006181 7.3e-52 208.0 111 84.7
TWI38G1154 Tripterygium wilfordii HOM05D005610 ORTHO05D006181 1.6e-51 206.8 138 75.4
MD10G1088300 Malus domestica HOM05D005610 ORTHO05D006181 2.1e-51 206.5 116 81.9
ClCG01G011300 Citrullus lanatus HOM05D005610 ORTHO05D006181 2.8e-51 206.1 111 83.8
Prupe.8G114900 Prunus persica HOM05D005610 ORTHO05D006181 2.8e-51 206.1 116 81.9
CsaV3_4G031690 Cucumis sativus L. HOM05D005610 ORTHO05D006181 3.6e-51 205.7 111 82.9
Dinv13959 Davidia involucrata HOM05D005610 ORTHO05D006181 4.7e-51 205.3 112 83.0
PGSC0003DMG400023560 Solanum tuberosum HOM05D005610 ORTHO05D006181 6.2e-51 204.9 112 84.8
CAN.G1263.12 Capsicum annuum HOM05D005610 ORTHO05D006181 8.0e-51 204.5 112 83.9
PGR142G4331 Punica granatum HOM05D005610 ORTHO05D006181 1.0e-50 204.1 112 83.9
Actinidia26870 Actinidia chinensis HOM05D005610 ORTHO05D006181 1.8e-50 203.4 113 81.4
arahy.Tifrunner.gnm1.ann1.PD4MQY Arachis hypogaea HOM05D005610 ORTHO05D006181 1.8e-50 203.4 122 77.9
FAN15G0825 Fragaria x ananassa HOM05D005610 ORTHO05D006181 1.8e-50 203.4 116 81.9
TAR624G0514 Trochodendron aralioides HOM05D005610 ORTHO05D006181 1.8e-50 203.4 121 79.3
Atru.chr1.2482 Acer truncatum HOM05D005610 ORTHO05D006181 2.3e-50 203.0 112 84.8
Duzib160G0112 Durio zibethinus HOM05D005610 ORTHO05D006181 2.3e-50 203.0 116 78.4
arahy.Tifrunner.gnm1.ann1.IYUI89 Arachis hypogaea HOM05D003989 ORTHO05D004626 3.1e-50 202.6 122 77.9
Sopen04g006810 Solanum pennellii HOM05D005610 ORTHO05D006181 3.1e-50 202.6 141 72.3
RcHm_v2.0_Chr6g0259461 Rosa chinensis HOM05D005610 ORTHO05D006181 4.0e-50 202.2 116 81.9
Solyc04g014700.4 Solanum lycopersicum HOM05D005610 ORTHO05D006181 6.8e-50 201.4 112 83.0
CANSAT01G2220 Cannabis sativa HOM05D005610 ORTHO05D006181 8.9e-50 201.1 111 82.0
Ciclev10017234m.g Citrus clementina HOM05D005610 ORTHO05D006181 8.9e-50 201.1 110 86.4
FvH4_2g07070 Fragaria vesca HOM05D005610 ORTHO05D006181 8.9e-50 201.1 122 77.0
Nitab4.5_0001701g0220 Nicotiana tabacum HOM05D005610 ORTHO05D006181 1.2e-49 200.7 112 83.0
Sed0027170 Sechium edule HOM05D005610 ORTHO05D006181 1.2e-49 200.7 112 81.2
Peaxi162Scf00442g00523 Petunia axillaris HOM05D005610 ORTHO05D006181 1.5e-49 200.3 112 83.0
Glyma.19G169600 Glycine max HOM05D005610 ORTHO05D006181 2.0e-49 199.9 116 80.2
Nitab4.5_0008006g0060 Nicotiana tabacum HOM05D005610 ORTHO05D006181 2.0e-49 199.9 112 83.0
Nitab4.5_0001867g0090 Nicotiana tabacum HOM05D005610 ORTHO05D006181 2.6e-49 199.5 122 77.9
Nitab4.5_0018980g0020 Nicotiana tabacum HOM05D005610 ORTHO05D006181 4.4e-49 198.7 112 82.1
Phvul.004G117800 Phaseolus vulgaris HOM05D005610 ORTHO05D006181 4.4e-49 198.7 116 79.3
GSVIVG01008189001 Vitis vinifera HOM05D005610 ORTHO05D006181 5.8e-49 198.4 116 78.4
Glyma.03G168300 Glycine max HOM05D005610 ORTHO05D006181 9.8e-49 197.6 116 80.2
Lj5g0020791 Lotus japonicus HOM05D005610 ORTHO05D006181 9.8e-49 197.6 130 72.3
ECA238G1057 Erigeron canadensis HOM05D005610 ORTHO05D006181 1.3e-48 197.2 112 77.7
Lj4g0017663 Lotus japonicus HOM05D005610 ORTHO05D006181 1.7e-48 196.8 116 79.3
Ca_13393_v3 Cicer arietinum L. HOM05D005610 ORTHO05D006181 3.7e-48 195.7 112 80.4
PSO210G2880 Papaver somniferum HOM05D005610 ORTHO05D006181 4.9e-48 195.3 121 76.9
CSS0047184 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 8.3e-48 194.5 112 79.5
Eucgr.B02596 Eucalyptus grandis HOM05D005610 ORTHO05D006181 8.3e-48 194.5 113 78.8
Lalb_Chr04g0257231 Lupinus albus HOM05D005610 ORTHO05D006181 8.3e-48 194.5 114 79.8
Cc00_g15270 Coffea canephora HOM05D005610 ORTHO05D006181 1.4e-47 193.7 116 77.6
EL10Ac4g08756 Beta vulgaris HOM05D005610 ORTHO05D006181 3.2e-47 192.6 112 81.2
vmacro03652 Vaccinium macrocarpon HOM05D005610 ORTHO05D006181 4.1e-47 192.2 111 78.4
Medtr1g023330 Medicago truncatula HOM05D005610 ORTHO05D006181 7.0e-47 191.4 112 78.6
PSO302G0046 Papaver somniferum HOM05D005610 ORTHO05D006181 9.2e-47 191.0 121 75.2
CDE04G2721 Ceratophyllum demersum HOM05D005610 ORTHO05D006181 1.2e-46 190.7 121 71.1
Aqoxy4G02780 Aquilegia oxysepala HOM05D005610 ORTHO05D006181 2.0e-46 189.9 111 78.4
AUR62014294 Chenopodium quinoa HOM05D005610 ORTHO05D006181 2.0e-46 189.9 114 78.1
HanXRQChr05g0129341 Helianthus annuus HOM05D005610 ORTHO05D006181 2.0e-46 189.9 115 72.2
Medtr8g106470 Medicago truncatula HOM05D005610 ORTHO05D006181 2.0e-46 189.9 112 79.5
AUR62034142 Chenopodium quinoa HOM05D005610 ORTHO05D006181 2.7e-46 189.5 112 79.5
SalBow8G2682 Salvia bowleyana HOM05D005610 ORTHO05D006181 2.7e-46 189.5 111 76.6
Lj6g0026774 Lotus japonicus HOM05D005610 ORTHO05D006181 3.5e-46 189.1 112 76.8
Manes.16G001300 Manihot esculenta HOM05D005610 ORTHO05D006181 6.0e-46 188.3 114 76.3
Cc09_g00980 Coffea canephora HOM05D005610 ORTHO05D006181 7.8e-46 188.0 112 76.8
SGA_v2.0_scaffold4G01884 Striga asiatica HOM05D005610 ORTHO05D006181 7.8e-46 188.0 116 75.0
BcaC09g47662 Brassica carinata HOM05D005610 ORTHO05D006181 1.0e-45 187.6 111 78.4
BNapus_Darmor_BZH_scaffold_133p00040 Brassica napus HOM05D005610 ORTHO05D006181 3.0e-45 186.0 111 77.5
BraA01t04664Z Brassica rapa HOM05D005610 ORTHO05D006181 3.0e-45 186.0 111 77.5
SGA_v2.0_scaffold7G03768 Striga asiatica HOM05D005610 ORTHO05D006181 3.9e-45 185.7 111 74.8
Migut.H01600 Erythranthe guttata HOM05D005610 ORTHO05D006181 5.0e-45 185.3 111 75.7
Hund25163 Selenicereus undatus HOM05D005610 ORTHO05D006181 5.0e-45 185.3 114 73.7
Thhalv10022365m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 6.6e-45 184.9 159 60.4
CARHR075530 Cardamine hirsuta HOM05D005610 ORTHO05D006181 8.6e-45 184.5 111 75.7
Aa31LG5G10530 Aethionema arabicum HOM05D005610 ORTHO05D006181 1.1e-44 184.1 111 74.8
Carub.0003s0067 Capsella rubella HOM05D005610 ORTHO05D006181 1.1e-44 184.1 111 75.7
Oeu054255.1 Olea europaea HOM05D005610 ORTHO05D006181 1.5e-44 183.7 111 77.5
VMungo0464G1641 Vigna mungo HOM05D005610 ORTHO05D006181 1.5e-44 183.7 140 65.7
AT3G01435 Arabidopsis thaliana HOM05D005610 ORTHO05D006181 3.3e-44 182.6 111 74.8
Sp3g00630 Schrenkiella parvula HOM05D005610 ORTHO05D006181 3.3e-44 182.6 111 73.9
AL3G10740 Arabidopsis lyrata HOM05D005610 ORTHO05D006181 4.3e-44 182.2 111 74.8
Nn8g38603 Nelumbo nucifera HOM05D005610 ORTHO05D006181 9.5e-44 181.0 142 64.8
THA.LOC104822382 Tarenaya hassleriana HOM05D005610 ORTHO05D006181 9.5e-44 181.0 111 75.7
Oeu052223.1 Olea europaea HOM05D005610 ORTHO05D006181 4.7e-43 178.7 112 74.1
Sabra04G0000600 Salix brachista HOM05D005610 ORTHO05D006181 8.1e-43 177.9 113 75.2
MSTRG.13119 Avicennia marina HOM05D005610 ORTHO05D006181 1.8e-42 176.8 111 72.1
Potri.004G001600 Populus trichocarpa HOM05D005610 ORTHO05D006181 8.9e-42 174.5 113 73.5
A05p44570 Brassica napus HOM05D005610 ORTHO05D006181 1.5e-41 173.7 111 73.0
BolC1t05956H Brassica oleracea HOM05D005610 ORTHO05D006181 1.5e-41 173.7 132 65.2
BraA05t23199Z Brassica rapa HOM05D005610 ORTHO05D006181 1.5e-41 173.7 111 73.0
Thhalv10022907m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 2.0e-41 173.3 126 65.9
BolC5t35148H Brassica oleracea HOM05D005610 ORTHO05D006181 3.7e-40 169.1 111 71.2
C09p75160 Brassica napus HOM05D005610 ORTHO05D006181 4.1e-39 165.6 111 70.3
unitig_748.g7924 Utricularia gibba HOM05D000772 ORTHO05D006181 2.7e-38 162.9 110 65.5
ATR1153G018 Amborella trichopoda HOM05D005610 ORTHO05D006181 4.6e-38 162.2 106 67.9
Ah.06g187910 Amaranthus hybridus HOM05D005610 ORTHO05D006181 7.8e-38 161.4 98 73.5
Lsat_1_v5_gn_7_13401 Lactuca sativa HOM05D005610 ORTHO05D006181 7.8e-38 161.4 98 70.4
Zm00001eb234830 Zea mays HOM05D005610 ORTHO05D006181 3.0e-37 159.5 105 70.5
Gohir.D06G159100 Gossypium hirsutum HOM05D005610 ORTHO05D006181 6.6e-37 158.3 86 81.4
ATR0723G088 Amborella trichopoda HOM05D005610 ORTHO05D006181 8.6e-37 157.9 106 67.0
TAR626G0207 Trochodendron aralioides HOM05D005610 ORTHO05D006181 1.6e-35 153.7 184 47.8
HPP92_003728 Vanilla planifolia HOM05D005610 ORTHO05D006181 4.7e-35 152.1 107 64.5
FAN24G2055 Fragaria x ananassa HOM05D005610 ORTHO05D006181 6.2e-35 151.8 86 79.1
Psat6g005240 Pisum sativum HOM05D005610 ORTHO05D006181 4.0e-34 149.1 117 66.7
Zm00001eb206370 Zea mays HOM05D005610 ORTHO05D006181 6.8e-34 148.3 97 72.2
Os02g0189100 Oryza sativa ssp. japonica HOM05D005610 ORTHO05D006181 8.9e-34 147.9 106 61.3
MBI19_g29445_MAGBIO Magnolia biondii HOM05D005610 ORTHO05D006181 2.6e-33 146.4 134 55.2
CSS0025052 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 9.9e-33 144.4 82 75.6
SEGI_23772 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 1.4e-31 140.6 108 62.0
Mapoly0014s0199 Marchantia polymorpha HOM05D005610 ORTHO05D006181 9.2e-31 137.9 107 57.9
Dinv29757 Davidia involucrata HOM05D005610 ORTHO05D006181 1.6e-30 137.1 87 75.9
Thecc.10G135300 Theobroma cacao HOM05D005610 ORTHO05D006181 6.6e-29 131.7 70 88.6
Pp3c10_18150 Physcomitrium patens HOM05D005610 ORTHO05D006181 1.9e-28 130.2 105 58.1
HanXRQChr15g0470051 Helianthus annuus HOM05D005610 ORTHO05D006181 3.3e-28 129.4 88 67.0
FAN27G3428 Fragaria x ananassa HOM05D005610 ORTHO05D006181 9.6e-28 127.9 76 76.3
BNapus_Darmor_BZH_scaffold_119p00050 Brassica napus HOM05D005610 ORTHO05D006181 6.2e-27 125.2 75 78.7
BNapus_Darmor_BZH_scaffold_97p00380 Brassica napus HOM05D005610 ORTHO05D006181 6.2e-27 125.2 75 78.7
Eucgr.K02585 Eucalyptus grandis HOM05D005610 ORTHO05D006181 4.0e-26 122.5 70 82.9
Actinidia02323 Actinidia chinensis HOM05D005610 ORTHO05D006181 3.4e-25 119.4 67 77.6
Zm00001eb004040 Zea mays HOM05D005610 ORTHO05D006181 3.8e-24 115.9 72 69.4
SMO200G0153 Selaginella moellendorffii HOM05D005610 ORTHO05D006181 2.4e-23 113.2 106 45.3
FAN20G1916 Fragaria x ananassa HOM05D005610 ORTHO05D006181 5.4e-23 112.1 59 83.1
CBR_g27782 Chara braunii HOM05D005610 ORTHO05D001468 3.5e-22 109.4 111 48.6
AagrBONN_evm.TU.Sc2ySwM_228.3334 Anthoceros agrestis HOM05D005610 ORTHO05D006181 1.1e-20 104.4 136 37.5
Rhsim13G0147700 Rhododendron simsii HOM05D005610 ORTHO05D006181 1.6e-19 100.5 61 77.0
Pp3c3_34050 Physcomitrium patens HOM05D005610 ORTHO05D006181 8.1e-19 98.2 78 59.0
TPR.G7342 Trifolium pratense HOM05D005610 ORTHO05D006181 2.4e-18 96.7 55 76.4
Sc16g0007910 Simmondsia chinensis HOM05D005610 ORTHO05D006181 2.4e-15 86.7 52 76.9
RcHm_v2.0_Chr7g0240711 Rosa chinensis HOM05D005610 ORTHO05D006181 1.2e-14 84.3 41 90.2
RcHm_v2.0_Chr7g0240721 Rosa chinensis HOM05D005610 ORTHO05D006181 6.7e-13 78.6 48 77.1
Migut.M01383 Erythranthe guttata HOM05D005610 ORTHO05D006181 3.8e-08 62.8 58 51.7
SEGI_27415 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 3.8e-08 62.8 60 50.0
CARHR125830 Cardamine hirsuta HOM05D005610 ORTHO05D006181 1.9e-07 60.5 38 65.8
CiPaw.09G101200 Carya illinoinensis HOM05D005610 ORTHO05D006181 6.0e-06 55.5 37 64.9


User provided reference genes

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