Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_06585 Corylus avellana HOM05D004838 ORTHO05D005373 2.1e-42 175.3 86 100.0
QL05p081093 Quercus lobata HOM05D004838 ORTHO05D005373 5.2e-25 117.5 85 69.4
Gohir.A05G166000 Gossypium hirsutum HOM05D004838 ORTHO05D005373 2.2e-15 85.5 86 51.2
Gohir.D05G169000 Gossypium hirsutum HOM05D004838 ORTHO05D005373 2.8e-15 85.1 86 51.2
Gorai.009G174200 Gossypium raimondii HOM05D004838 ORTHO05D005373 1.8e-14 82.4 86 50.0
Thecc.06G200800 Theobroma cacao HOM05D004838 ORTHO05D005373 5.4e-14 80.9 86 48.8
MBI02_g13229_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 1.7e-12 75.9 89 47.2
TAR629G1266 Trochodendron aralioides HOM05D004838 ORTHO05D005373 2.5e-11 72.0 93 44.1
Nn1g06781 Nelumbo nucifera HOM05D004838 ORTHO05D005373 2.1e-10 68.9 97 46.4
Cpa.g.sc34.87 Carica papaya HOM05D004838 ORTHO05D005373 3.0e-09 65.1 90 43.3
Nitab4.5_0002791g0020 Nicotiana tabacum HOM05D004838 ORTHO05D005373 5.2e-09 64.3 98 40.8
Manes.12G082700 Manihot esculenta HOM05D004838 ORTHO05D005373 6.8e-09 63.9 95 43.2
Nn2g11248 Nelumbo nucifera HOM05D004838 ORTHO05D005373 1.2e-08 63.2 86 44.2
Eucgr.K00912 Eucalyptus grandis HOM05D004838 ORTHO05D005373 4.4e-08 61.2 99 39.4
CDE02G2086 Ceratophyllum demersum HOM05D001554 ORTHO05D001481 5.7e-08 60.8 94 39.4
Nitab4.5_0010094g0010 Nicotiana tabacum HOM05D004838 ORTHO05D005373 5.7e-08 60.8 98 38.8
ATR0852G001 Amborella trichopoda HOM05D004838 ORTHO05D005373 1.3e-07 59.7 85 42.4
SalBow7G0296 Salvia bowleyana HOM05D004838 ORTHO05D005373 1.7e-07 59.3 99 38.4
Nn1g03874 Nelumbo nucifera HOM05D004838 ORTHO05D005373 3.7e-07 58.2 95 40.0
Potri.011G042000 Populus trichocarpa HOM05D038532 ORTHO05D005373 3.7e-07 58.2 84 39.3
CiPaw.03G169600 Carya illinoinensis HOM05D004838 ORTHO05D005373 1.1e-06 56.6 96 38.5
PGSC0003DMG400018373 Solanum tuberosum HOM05D004838 ORTHO05D005373 1.1e-06 56.6 101 37.6
MD17G1084900 Malus domestica HOM05D004838 ORTHO05D005373 1.4e-06 56.2 91 40.7
Sed0027638 Sechium edule HOM05D004838 ORTHO05D005373 1.8e-06 55.8 91 37.4
Solyc07g054730.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 2.4e-06 55.5 101 36.6
Sopen07g028660 Solanum pennellii HOM05D004838 ORTHO05D005373 2.4e-06 55.5 101 36.6
Cfa014541 Carpinus fangiana HOM05D004838 ORTHO05D005373 3.1e-06 55.1 98 38.8
MELO3C018765.2 Cucumis melo HOM05D004838 ORTHO05D005373 3.1e-06 55.1 91 35.2
CsaV3_7G004130 Cucumis sativus L. HOM05D004838 ORTHO05D005373 3.1e-06 55.1 91 35.2
Manes.13G151900 Manihot esculenta HOM05D004838 ORTHO05D005373 3.1e-06 55.1 96 39.6
Haze_13083 Corylus avellana HOM05D004838 ORTHO05D005373 4.1e-06 54.7 98 38.8
FAN02G3359 Fragaria x ananassa HOM05D004838 ORTHO05D005373 4.1e-06 54.7 89 40.4
Manes.17G033400 Manihot esculenta HOM05D038532 ORTHO05D005373 4.1e-06 54.7 86 38.4
CSS0009105 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 5.4e-06 54.3 96 36.5
CiPaw.04G122600 Carya illinoinensis HOM05D004838 ORTHO05D005373 5.4e-06 54.3 97 38.1
ClCG02G001310 Citrullus lanatus HOM05D004838 ORTHO05D005373 5.4e-06 54.3 91 35.2
Hma1.2p1_0565F.1_g179630 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 9.2e-06 53.5 104 34.6
Sc21g0002490 Simmondsia chinensis HOM05D004838 ORTHO05D005373 9.2e-06 53.5 89 40.4


User provided reference genes

Program Settings