Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 0.0e+00 1330.5 670 100.0
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 0.0e+00 1137.5 670 86.9
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 4.2e-263 911.4 763 63.6
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 1.2e-225 786.9 710 61.0
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 3.6e-222 775.4 683 61.9
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 3.0e-221 772.3 725 59.4
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 1.0e-216 757.3 531 71.9
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 5.7e-212 741.5 535 70.5
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 5.0e-208 728.4 688 59.9
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 2.5e-207 726.1 731 55.3
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 2.6e-204 716.1 678 58.8
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 4.4e-204 715.3 699 55.9
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 2.0e-201 706.4 682 58.2
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 1.1e-199 700.7 702 57.4
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 1.6e-198 696.8 689 57.2
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 4.7e-198 695.3 688 54.5
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 1.3e-195 687.2 473 72.3
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 1.3e-195 687.2 733 52.5
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 1.7e-195 686.8 713 53.6
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 1.1e-194 684.1 690 55.7
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 1.2e-193 680.6 443 74.0
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 2.7e-193 679.5 692 56.1
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 3.5e-193 679.1 688 56.0
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 7.2e-191 671.4 652 57.2
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 2.0e-188 663.3 507 65.9
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 3.7e-187 659.1 669 54.4
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 1.1e-186 657.5 471 70.5
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 1.8e-186 656.8 461 69.0
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 5.0e-184 648.7 443 72.0
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 1.9e-183 646.7 692 53.3
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 1.2e-182 644.0 527 62.2
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 2.1e-182 643.3 702 50.9
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 3.6e-182 642.5 689 54.3
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 4.0e-181 639.0 474 67.5
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 8.9e-181 637.9 474 67.5
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.5e-180 637.1 514 64.0
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 3.7e-179 632.5 685 54.3
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 4.9e-179 632.1 679 53.2
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 1.1e-178 630.9 684 52.8
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 1.4e-178 630.6 640 55.2
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 1.2e-177 627.5 646 55.3
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 1.6e-177 627.1 669 53.2
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 2.7e-177 626.3 518 62.2
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 7.8e-177 624.8 504 63.7
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 3.9e-176 622.5 518 63.3
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 2.5e-175 619.8 477 64.8
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 2.1e-174 616.7 537 60.7
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 2.8e-174 616.3 645 54.4
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 1.5e-172 610.5 534 61.6
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 9.8e-172 607.8 534 61.4
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 3.7e-171 605.9 488 60.9
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 8.3e-171 604.7 496 63.1
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 1.2e-169 600.9 527 59.6
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 1.2e-169 600.9 464 66.4
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 2.7e-169 599.7 472 64.2
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 1.1e-167 594.3 704 50.9
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 1.1e-167 594.3 716 49.0
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 3.6e-166 589.3 642 51.7
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 1.1e-165 587.8 652 50.9
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 6.8e-165 585.1 458 61.4
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 4.1e-162 575.9 468 61.5
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 3.5e-161 572.8 454 64.5
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 1.7e-160 570.5 462 62.3
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 1.2e-158 564.3 511 57.7
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 1.9e-154 550.4 469 60.6
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 5.4e-154 548.9 433 62.4
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 2.5e-151 540.0 598 51.8
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 5.4e-138 495.7 493 57.0
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 2.4e-130 470.3 371 60.9
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 7.1e-130 468.8 531 51.4
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 1.9e-119 434.1 431 51.0
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 2.0e-116 424.1 287 71.8
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 2.9e-107 393.7 330 62.4
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 2.8e-94 350.5 272 64.0
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 3.1e-93 347.1 455 49.5
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 2.4e-85 320.9 280 60.0
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 1.6e-84 318.2 369 49.1
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 8.0e-81 305.8 260 62.7
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 2.6e-63 247.7 280 48.9
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 5.0e-59 233.4 192 59.4
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 1.2e-41 175.6 133 59.4
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 1.3e-38 165.6 156 59.0
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 1.3e-35 155.6 133 59.4
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 1.3e-30 139.0 504 26.2
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 7.8e-28 129.8 330 35.2
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 5.6e-26 123.6 78 71.8
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 2.1e-20 105.1 126 49.2
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 6.4e-14 83.6 92 53.3
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 6.4e-14 83.6 87 50.6
PRCOL_00005975 Prasinoderma coloniale HOM05D000032 ORTHO05D028824 6.0e-12 77.0 189 29.6
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 1.5e-10 72.4 305 27.9
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 2.5e-10 71.6 190 31.1
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 1.3e-09 69.3 57 59.6
Cre03.g188750 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D028824 1.6e-09 68.9 212 29.7
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 3.7e-09 67.8 164 30.5
SGA_v2.0_scaffold26G11386 Striga asiatica HOM05D007621 ORTHO05D009631 8.4e-06 56.6 58 50.0


User provided reference genes

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