Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_06571 Corylus avellana HOM05D006195 ORTHO05D007710 4.0e-256 887.5 422 100.0
Cfa000355 Carpinus fangiana HOM05D006195 ORTHO05D007710 9.1e-216 753.4 409 89.7
CiPaw.09G158100 Carya illinoinensis HOM05D006195 ORTHO05D007710 9.8e-202 706.8 383 86.9
QL04p018330 Quercus lobata HOM05D006195 ORTHO05D007710 1.9e-197 692.6 393 84.5
Prupe.4G036600 Prunus persica HOM05D006195 ORTHO05D007710 9.5e-181 637.1 385 78.4
Gorai.009G173800 Gossypium raimondii HOM05D006195 ORTHO05D007710 2.1e-180 636.0 390 78.5
Gohir.D05G168600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 8.1e-180 634.0 390 78.2
Gohir.A05G165600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 1.1e-179 633.6 390 78.2
MD10G1303200 Malus domestica HOM05D006195 ORTHO05D007710 1.1e-179 633.6 379 79.7
Thecc.06G199000 Theobroma cacao HOM05D006195 ORTHO05D007710 5.2e-179 631.3 390 77.7
TWI38G0511 Tripterygium wilfordii HOM05D006195 ORTHO05D007710 1.5e-178 629.8 386 77.5
FvH4_3g04030 Fragaria vesca HOM05D006195 ORTHO05D007710 2.9e-177 625.5 388 77.3
Actinidia24060 Actinidia chinensis HOM05D006195 ORTHO05D007710 3.7e-177 625.2 388 77.1
Sed0022279 Sechium edule HOM05D006195 ORTHO05D007710 1.1e-176 623.6 383 77.8
CANSAT56G3748 Cannabis sativa HOM05D006195 ORTHO05D007710 2.4e-176 622.5 389 77.6
RcHm_v2.0_Chr5g0006371 Rosa chinensis HOM05D006195 ORTHO05D007710 2.4e-176 622.5 394 75.9
COL.COLO4_31584 Corchorus olitorius HOM05D006195 ORTHO05D007710 5.4e-176 621.3 392 75.3
MD05G1325300 Malus domestica HOM05D006195 ORTHO05D007710 9.2e-176 620.5 392 77.0
CsaV3_1G011800 Cucumis sativus L. HOM05D006195 ORTHO05D007710 1.2e-175 620.2 386 75.6
FAN11G1039 Fragaria x ananassa HOM05D006195 ORTHO05D007710 1.6e-175 619.8 402 75.4
Ciclev10015313m.g Citrus clementina HOM05D006195 ORTHO05D007710 2.7e-175 619.0 391 75.4
ClCG03G005530 Citrullus lanatus HOM05D006195 ORTHO05D007710 1.3e-174 616.7 387 75.2
GSVIVG01003194001 Vitis vinifera HOM05D006195 ORTHO05D007710 1.3e-174 616.7 396 73.7
Atru.chr10.2006 Acer truncatum HOM05D006195 ORTHO05D007710 3.9e-174 615.1 385 75.8
Eucgr.E03701 Eucalyptus grandis HOM05D006195 ORTHO05D007710 3.9e-174 615.1 379 76.3
Cpa.g.sc27.120 Carica papaya HOM05D006195 ORTHO05D007710 5.1e-174 614.8 398 74.4
TAR629G3096 Trochodendron aralioides HOM05D006195 ORTHO05D007710 1.5e-173 613.2 389 76.3
Potri.011G043000 Populus trichocarpa HOM05D006195 ORTHO05D007710 3.3e-173 612.1 367 77.9
PGR042G1193 Punica granatum HOM05D006195 ORTHO05D007710 6.8e-171 604.4 389 73.8
Manes.17G039200 Manihot esculenta HOM05D006195 ORTHO05D007710 8.9e-171 604.0 386 74.6
Lsat_1_v5_gn_7_19641 Lactuca sativa HOM05D006195 ORTHO05D007710 2.0e-170 602.8 391 72.6
HanXRQChr14g0437281 Helianthus annuus HOM05D006195 ORTHO05D007710 4.4e-170 601.7 370 74.9
Ca_18483_v3 Cicer arietinum L. HOM05D006195 ORTHO05D007710 2.2e-169 599.4 407 72.0
Lj2A280G38 Lonicera japonica HOM05D006195 ORTHO05D007710 2.2e-169 599.4 423 69.5
Rhsim02G0120000 Rhododendron simsii HOM05D006195 ORTHO05D007710 3.8e-169 598.6 401 71.3
Duzib235G1322 Durio zibethinus HOM05D006195 ORTHO05D007710 9.2e-168 594.0 386 74.4
Lalb_Chr09g0327371 Lupinus albus HOM05D006195 ORTHO05D007710 9.2e-168 594.0 390 72.3
Aqoxy1G02740 Aquilegia oxysepala HOM05D006195 ORTHO05D007710 1.0e-166 590.5 357 77.0
PGSC0003DMG400022408 Solanum tuberosum HOM05D006195 ORTHO05D007710 3.0e-166 589.0 364 74.5
vmacro15867 Vaccinium macrocarpon HOM05D006195 ORTHO05D007710 5.1e-166 588.2 357 76.5
Solyc02g079110.3 Solanum lycopersicum HOM05D006195 ORTHO05D007710 8.7e-166 587.4 364 74.7
THA.LOC104806275 Tarenaya hassleriana HOM05D006195 ORTHO05D007710 8.7e-166 587.4 365 74.5
Migut.M01211 Erythranthe guttata HOM05D006195 ORTHO05D007710 2.5e-165 585.9 390 73.8
FAN25G3765 Fragaria x ananassa HOM05D006195 ORTHO05D007710 2.5e-165 585.9 417 70.5
Sopen02g023920 Solanum pennellii HOM05D006195 ORTHO05D007710 3.3e-165 585.5 384 72.1
arahy.Tifrunner.gnm1.ann1.IWY5CJ Arachis hypogaea HOM05D006195 ORTHO05D007710 9.6e-165 583.9 389 72.2
Medtr4g091080 Medicago truncatula HOM05D006195 ORTHO05D007710 1.2e-164 583.6 388 72.7
arahy.Tifrunner.gnm1.ann1.HDHM3Z Arachis hypogaea HOM05D006195 ORTHO05D007710 1.6e-164 583.2 389 72.2
EL10Ac8g20527 Beta vulgaris HOM05D006195 ORTHO05D007710 2.1e-164 582.8 369 73.7
Migut.I00196 Erythranthe guttata HOM05D006195 ORTHO05D007710 6.2e-164 581.3 390 73.3
Sc17g0006620 Simmondsia chinensis HOM05D006195 ORTHO05D007710 6.2e-164 581.3 360 74.7
Carub.0007s1990 Capsella rubella HOM05D006195 ORTHO05D007710 1.1e-163 580.5 384 71.1
Cc02_g12450 Coffea canephora HOM05D006195 ORTHO05D007710 1.1e-163 580.5 403 69.2
AT4G21520 Arabidopsis thaliana HOM05D006195 ORTHO05D007710 3.1e-163 578.9 380 71.1
SalBow8G2471 Salvia bowleyana HOM05D006195 ORTHO05D007710 3.1e-163 578.9 392 71.7
Phvul.002G222200 Phaseolus vulgaris HOM05D006195 ORTHO05D007710 6.9e-163 577.8 384 72.9
AL7G32530 Arabidopsis lyrata HOM05D006195 ORTHO05D007710 9.0e-163 577.4 384 70.6
Peaxi162Scf00355g00914 Petunia axillaris HOM05D006195 ORTHO05D007710 9.0e-163 577.4 377 72.4
SGA_v2.0_scaffold7G03951 Striga asiatica HOM05D006195 ORTHO05D007710 2.0e-162 576.2 391 70.6
BcaNung02791 Brassica carinata HOM05D006195 ORTHO05D007710 2.6e-162 575.9 384 70.6
Oeu038214.1 Olea europaea HOM05D006195 ORTHO05D007710 3.4e-162 575.5 392 71.4
Glyma.07G190200 Glycine max HOM05D006195 ORTHO05D007710 4.4e-162 575.1 396 71.2
Sp7g19630 Schrenkiella parvula HOM05D006195 ORTHO05D007710 4.4e-162 575.1 384 70.6
Aa31LG6G3540 Aethionema arabicum HOM05D006195 ORTHO05D007710 5.8e-162 574.7 383 71.0
VMungo0251G2515 Vigna mungo HOM05D006195 ORTHO05D007710 5.8e-162 574.7 392 71.7
Thhalv10025271m.g Eutrema salsugineum HOM05D006195 ORTHO05D007710 7.6e-162 574.3 380 71.1
CARHR228180 Cardamine hirsuta HOM05D006195 ORTHO05D007710 1.7e-161 573.2 384 69.5
TPR.G32422 Trifolium pratense HOM05D006195 ORTHO05D007710 8.4e-161 570.9 365 75.1
MBI14_g15641_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 1.4e-160 570.1 388 70.4
Nitab4.5_0009994g0040 Nicotiana tabacum HOM05D006195 ORTHO05D007710 5.4e-160 568.2 414 67.6
PSO675G1294 Papaver somniferum HOM05D006195 ORTHO05D007710 5.4e-160 568.2 383 71.0
C01p15450 Brassica napus HOM05D006195 ORTHO05D007710 1.0e-158 563.9 384 70.1
BolC1t01499H Brassica oleracea HOM05D006195 ORTHO05D007710 1.0e-158 563.9 384 70.1
A01p12830 Brassica napus HOM05D006195 ORTHO05D007710 5.1e-158 561.6 387 69.5
BraA01t01227Z Brassica rapa HOM05D006195 ORTHO05D007710 5.1e-158 561.6 388 69.3
MSTRG.8639 Avicennia marina HOM05D006195 ORTHO05D007710 1.5e-157 560.1 400 67.2
ECA236G2696 Erigeron canadensis HOM05D006195 ORTHO05D007710 4.3e-157 558.5 338 76.0
FAN21G3429 Fragaria x ananassa HOM05D006195 ORTHO05D007710 7.3e-157 557.8 411 68.9
Lj4g0017156 Lotus japonicus HOM05D006195 ORTHO05D007710 1.6e-156 556.6 389 69.2
MELO3C002557.2 Cucumis melo HOM05D006195 ORTHO05D007710 1.5e-154 550.1 390 68.7
ATR0693G097 Amborella trichopoda HOM05D006195 ORTHO05D007710 1.3e-153 547.0 364 69.8
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 4.9e-153 545.0 323 79.6
Os03g0738000 Oryza sativa ssp. japonica HOM05D006195 ORTHO05D007710 1.8e-147 526.6 367 67.8
CSS0049192 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 9.0e-147 524.2 327 75.5
DCAR_008069 Daucus carota HOM05D006195 ORTHO05D007710 5.8e-146 521.5 357 70.0
Ah.14g088920 Amaranthus hybridus HOM05D006195 ORTHO05D007710 3.5e-143 512.3 361 69.3
AUR62016899 Chenopodium quinoa HOM05D006195 ORTHO05D007710 1.0e-137 494.2 402 61.2
AUR62014719 Chenopodium quinoa HOM05D006195 ORTHO05D007710 1.7e-137 493.4 339 71.1
Zm00001eb056530 Zea mays HOM05D006195 ORTHO05D007710 1.7e-137 493.4 367 65.4
AagrBONN_evm.TU.Sc2ySwM_344.4192 Anthoceros agrestis HOM05D006195 ORTHO05D007710 7.4e-133 478.0 356 64.6
CDE11G0466 Ceratophyllum demersum HOM05D006195 ORTHO05D007710 8.2e-132 474.6 327 68.2
Pp3c6_22670 Physcomitrium patens HOM05D006195 ORTHO05D007710 8.2e-132 474.6 356 62.9
Mapoly0082s0056 Marchantia polymorpha HOM05D006195 ORTHO05D007710 2.5e-128 463.0 358 60.3
Dinv40483 Davidia involucrata HOM05D006195 ORTHO05D007710 1.0e-126 457.6 289 76.1
Nitab4.5_0000190g0110 Nicotiana tabacum HOM05D006195 ORTHO05D007710 2.6e-122 443.0 292 71.6
SMO137G0351 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 3.4e-122 442.6 354 58.8
Psat7g108560 Pisum sativum HOM05D006195 ORTHO05D007710 1.2e-119 434.1 304 69.4
Hund23609 Selenicereus undatus HOM05D006195 ORTHO05D007710 1.3e-116 424.1 296 70.9
MBI14_g13652_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 1.2e-114 417.5 390 57.4
unitig_37.g12337 Utricularia gibba HOM05D006195 ORTHO05D007710 2.6e-114 416.4 422 53.8
CBR_g41455 Chara braunii HOM05D006195 ORTHO05D007710 5.7e-109 398.7 370 52.4
CBR_g20417 Chara braunii HOM05D006195 ORTHO05D007710 6.3e-108 395.2 371 52.8
Eucgr.L01396 Eucalyptus grandis HOM05D006195 ORTHO05D007710 3.0e-102 376.3 250 72.0
Potri.004G034600 Populus trichocarpa HOM05D006195 ORTHO05D007710 2.0e-90 337.0 245 67.3
SMO116G0485 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 1.0e-86 324.7 278 56.5
HPP92_018057 Vanilla planifolia HOM05D006195 ORTHO05D007710 7.8e-82 308.5 295 54.6
Cre07.g326350 Chlamydomonas reinhardtii HOM05D006195 ORTHO05D007710 7.3e-80 302.0 364 43.7
TPR.G37128 Trifolium pratense HOM05D006195 ORTHO05D007710 4.7e-79 299.3 179 77.1
SalBow6G2099 Salvia bowleyana HOM05D006195 ORTHO05D007710 2.3e-78 297.0 171 79.5
SalBow6G4337 Salvia bowleyana HOM05D006195 ORTHO05D007710 2.3e-78 297.0 171 79.5
MCO07G204 Micromonas commoda HOM05D006195 ORTHO05D007710 8.6e-73 278.5 361 42.9
Nn1g03899 Nelumbo nucifera HOM05D006195 ORTHO05D007710 4.3e-72 276.2 418 41.6
SalBow1G5137 Salvia bowleyana HOM05D006195 ORTHO05D007710 7.8e-66 255.4 146 79.5
Dinv18994 Davidia involucrata HOM05D006195 ORTHO05D007710 2.2e-52 210.7 218 55.5
Manes.10G084901 Manihot esculenta HOM05D006195 ORTHO05D007710 1.9e-48 197.6 127 77.2
PRCOL_00004057 Prasinoderma coloniale HOM05D006195 ORTHO05D007710 9.9e-45 185.3 298 35.9
GSVIVG01003189001 Vitis vinifera HOM05D006195 ORTHO05D007710 2.2e-44 184.1 126 68.3
SalBow4G2205 Salvia bowleyana HOM05D006195 ORTHO05D007710 4.9e-44 183.0 103 82.5
Nitab4.5_0003834g0010 Nicotiana tabacum HOM05D006195 ORTHO05D007710 1.3e-39 168.3 91 84.6
SHI02125 Sapria himalayana HOM05D006195 ORTHO05D007710 6.2e-39 166.0 130 60.8
SalBow1G7985 Salvia bowleyana HOM05D006195 ORTHO05D007710 6.9e-38 162.5 115 69.6
CSS0050458 Camellia sinensis var. sinensis HOM05D000911 ORTHO05D007710 3.4e-37 160.2 89 80.9
Thecc.06G199100 Theobroma cacao HOM05D006195 ORTHO05D007710 1.8e-30 137.9 86 74.4
SEGI_17138 Sequoiadendron giganteum HOM05D006195 ORTHO05D007710 1.2e-29 135.2 87 65.5
SHI48938 Sapria himalayana HOM05D006195 ORTHO05D007710 6.0e-26 122.9 103 56.3
HPP92_018063 Vanilla planifolia HOM05D006195 ORTHO05D007710 1.3e-23 115.2 153 45.8
SHI02124 Sapria himalayana HOM05D006195 ORTHO05D007710 1.6e-23 114.8 229 36.2
AL117U10020 Arabidopsis lyrata HOM05D064442 ORTHO05D011622 5.1e-17 93.2 119 44.5
Pp3c2_19830 Physcomitrium patens HOM05D002999 ORTHO05D003137 1.0e-09 68.9 353 23.8
CSS0013325 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 5.1e-09 66.6 73 47.9
Pp3c10_3720 Physcomitrium patens HOM05D002999 ORTHO05D003137 5.1e-09 66.6 353 24.1
AUR62043984 Chenopodium quinoa HOM05D002999 ORTHO05D003137 4.3e-08 63.5 216 27.3
EL10Ac9g21730 Beta vulgaris HOM05D003825 ORTHO05D004491 2.8e-07 60.8 264 20.8
Nitab4.5_0000557g0030 Nicotiana tabacum HOM05D003825 ORTHO05D004491 8.2e-07 59.3 236 22.5
AUR62011330 Chenopodium quinoa HOM05D003825 ORTHO05D004491 1.4e-06 58.5 268 20.9
AUR62016731 Chenopodium quinoa HOM05D003825 ORTHO05D004491 1.4e-06 58.5 268 20.9
Nitab4.5_0000215g0100 Nicotiana tabacum HOM05D003825 ORTHO05D004491 1.4e-06 58.5 236 22.5
Sc18g0004560 Simmondsia chinensis HOM05D003825 ORTHO05D004491 1.4e-06 58.5 215 22.3
TAR376G0761 Trochodendron aralioides HOM05D003825 ORTHO05D004491 1.4e-06 58.5 243 22.2
A03p62930 Brassica napus HOM05D003825 ORTHO05D004491 1.8e-06 58.2 277 22.0
Lalb_Chr08g0246621 Lupinus albus HOM05D003825 ORTHO05D004491 1.8e-06 58.2 215 22.3
Nitab4.5_0004172g0080 Nicotiana tabacum HOM05D003825 ORTHO05D004491 1.8e-06 58.2 260 21.2
BraA03t15368Z Brassica rapa HOM05D003825 ORTHO05D004491 2.4e-06 57.8 277 22.0
C07p60600 Brassica napus HOM05D003825 ORTHO05D004491 3.1e-06 57.4 277 22.0
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 3.1e-06 57.4 277 22.0
RcHm_v2.0_Chr6g0264111 Rosa chinensis HOM05D003825 ORTHO05D004491 4.1e-06 57.0 260 20.8
Hma1.2p1_1375F.1_g279040 Hydrangea macrophylla HOM05D003825 ORTHO05D004491 5.3e-06 56.6 264 20.1
MD10G1077300 Malus domestica HOM05D003825 ORTHO05D004491 5.3e-06 56.6 291 22.0
Zm00001eb052290 Zea mays HOM05D003825 ORTHO05D004491 6.9e-06 56.2 258 19.8
Hund06228 Selenicereus undatus HOM05D003825 ORTHO05D004491 9.1e-06 55.8 264 20.5


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